C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006ZY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136492-ENSG00000108506 CGP 9606 17:61681266-61928016
GeneTranscriptPositionBiotype
ENSG00000108506 (INTS2)
integrator complex subunit 2 		ENST00000251334 (INTS2-002) 61867249-61927991 protein_coding
ENST00000444766 (INTS2-001) 61865370-61928016 protein_coding
ENST00000578805 (INTS2-004) 61891577-61894186 retained_intron
ENST00000583076 (INTS2-003) 61926408-61927426 protein_coding
ENST00000583822 (INTS2-006) 61872023-61885005 retained_intron
ENST00000584967 (INTS2-005) 61877981-61885290 retained_intron
ENST00000617492 (INTS2-201) 61865367-61927105 protein_coding
ENSG00000136492 (BRIP1)
BRCA1 interacting protein C-terminal helicase 1 		ENST00000259008 (BRIP1-001) 61681266-61863521 protein_coding
ENST00000577598 (BRIP1-002) 61684772-61861539 protein_coding
ENST00000577913 (BRIP1-003) 61857228-61863344 protein_coding
ENST00000579028 (BRIP1-005) 61776401-61793673 nonsense_mediated_decay
ENST00000583837 (BRIP1-004) 61775878-61780277 processed_transcript
ENST00000584322 (BRIP1-006) 61739057-61776480 protein_coding
ENSG00000202361 (Y_RNA)
Y RNA 		ENST00000365491 (Y_RNA.1-560) 61874084-61874182 misc_RNA
CIL_0006ZY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034329-ENSMUSG00000018068 CGP 10090 11:86058138-86257575
GeneTranscriptPositionBiotype
ENSMUSG00000018068 (Ints2)
integrator complex subunit 2 		ENSMUST00000018212 (Ints2-001) 86210681-86257550 protein_coding
ENSMUST00000108039 (Ints2-002) 86212088-86256546 protein_coding
ENSMUST00000127745 (Ints2-009) 86235612-86238883 retained_intron
ENSMUST00000130614 (Ints2-004) 86256353-86257340 retained_intron
ENSMUST00000132024 (Ints2-005) 86255360-86257554 protein_coding
ENSMUST00000134828 (Ints2-011) 86217809-86229233 nonsense_mediated_decay
ENSMUST00000134883 (Ints2-008) 86234672-86257541 retained_intron
ENSMUST00000136469 (Ints2-003) 86256026-86257518 protein_coding
ENSMUST00000139285 (Ints2-007) 86251051-86257575 protein_coding
ENSMUST00000141756 (Ints2-006) 86256443-86257565 processed_transcript
ENSMUST00000146421 (Ints2-010) 86224943-86232176 retained_intron
ENSMUSG00000034329 (Brip1)
BRCA1 interacting protein C-terminal helicase 1 		ENSMUST00000044423 (Brip1-001) 86058138-86201193 protein_coding
ENSMUST00000123366 (Brip1-003) 86195699-86201166 processed_transcript
ENSMUST00000149748 (Brip1-002) 86195033-86201164 processed_transcript
ENSMUSG00000080823 (Atp5l-ps2)
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G, pseudogene 2 		ENSMUST00000121382 (Atp5l-ps2-001) 86185329-86185642 processed_pseudogene
ENSMUSG00000085208 (Brip1os)
BRCA1 interacting protein C-terminal helicase 1, opposite strand 		ENSMUST00000128960 (Brip1os-001) 86201370-86211192 antisense
ENSMUST00000143819 (Brip1os-002) 86201383-86304443 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ZY_0001ENSG00000108506ENST00000251334ENST00000444766ENST00000578805ENST00000583076ENST00000583822ENST00000584967ENST00000617492ENSG00000136492ENST00000259008ENST00000577598ENST00000577913ENST00000579028ENST00000583837ENST00000584322ENSG00000202361ENST00000365491CIL_0006ZY_0002ENSMUSG00000018068ENSMUST00000018212ENSMUST00000108039ENSMUST00000127745ENSMUST00000130614ENSMUST00000132024ENSMUST00000134828ENSMUST00000134883ENSMUST00000136469ENSMUST00000139285ENSMUST00000141756ENSMUST00000146421ENSMUSG00000034329ENSMUST00000044423ENSMUST00000123366ENSMUST00000149748ENSMUSG00000080823ENSMUST00000121382ENSMUSG00000085208ENSMUST00000128960ENSMUST00000143819
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ZY_0001ENSG00000108506ENST00000251334ENST00000444766ENST00000617492ENSG00000136492ENST00000259008ENST00000577598ENST00000579028ENST00000583837ENSG00000202361ENST00000365491CIL_0006ZY_0002ENSMUSG00000018068ENSMUST00000018212ENSMUST00000108039ENSMUSG00000034329ENSMUST00000044423ENSMUST00000123366ENSMUST00000149748ENSMUSG00000080823ENSMUST00000121382ENSMUSG00000085208ENSMUST00000128960
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108506 ENST00000251334 N/A N/A N/A N/A 0.634±0.00 0.401±0.00 N/A N/A N/A 0.996±0.00 0.411±0.00 N/A N/A 0.971±0.00
ENST00000444766 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.735±0.00 N/A N/A N/A 0.488±0.00
ENST00000578805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617492 1.173±0.00 1.440±0.00 0.850±0.00 1.170±0.14 1.026±0.00 0.587±0.34 0.699±0.00 0.945±0.24 0.380±0.01 0.223±0.00 0.480±0.00 1.046±0.02 0.678±0.55 1.866±0.44
ENSG00000136492 ENST00000259008 0.037±0.00 0.171±0.00 0.092±0.00 0.087±0.00 0.097±0.00 0.682±0.61 0.045±0.00 0.025±0.00 0.118±0.00 0.232±0.00 0.014±0.00 0.956±0.67 0.217±0.05 3.071±1.61
ENST00000577598 N/A N/A N/A 0.067±0.00 N/A 0.040±0.00 N/A N/A 0.056±0.00 0.037±0.00 0.049±0.00 N/A 0.049±0.00 N/A
ENST00000577913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579028 0.315±0.00 0.366±0.00 N/A N/A 0.179±0.00 N/A N/A N/A N/A 0.354±0.00 N/A N/A N/A N/A
ENST00000583837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 N/A N/A N/A
ENST00000584322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000202361 ENST00000365491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.175±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018068 ENSMUST00000018212 3.331±0.00 2.598±0.25 5.435±0.33 6.833±4.01 N/A 2.325±0.36 N/A 4.018±0.49 5.064±2.67 N/A N/A 4.383±0.34 5.344±1.57 2.630±0.29
ENSMUST00000108039 3.546±1.10 3.084±0.00 N/A 3.226±0.00 N/A 2.275±0.00 N/A N/A N/A N/A N/A 4.849±0.42 6.393±0.00 3.360±0.76
ENSMUST00000127745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034329 ENSMUST00000044423 0.270±0.02 0.048±0.02 0.205±0.00 0.386±0.27 0.150±0.07 0.215±0.08 0.098±0.02 0.281±0.10 1.185±1.00 0.099±0.03 0.016±0.01 0.421±0.23 0.870±0.55 0.430±0.16
ENSMUST00000123366 N/A N/A N/A N/A 0.373±0.00 0.399±0.00 N/A N/A N/A N/A N/A 0.429±0.00 N/A N/A
ENSMUST00000149748 N/A N/A N/A N/A N/A 0.540±0.00 N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A
ENSMUSG00000080823 ENSMUST00000121382 0.616±0.38 N/A 0.433±0.08 0.338±0.13 0.619±0.00 N/A 0.901±0.34 0.215±0.01 0.357±0.18 N/A 0.572±0.51 0.469±0.14 0.509±0.30 N/A
ENSMUSG00000085208 ENSMUST00000128960 5.166±1.18 4.474±0.59 7.665±0.52 6.831±0.49 7.084±1.34 7.637±0.66 2.347±0.11 6.092±0.22 5.638±2.53 6.558±0.73 N/A 7.428±1.45 6.732±2.22 N/A
ENSMUST00000143819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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