C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000701_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141371-ENSG00000062725 CGP 9606 17:60392429-60526219
GeneTranscriptPositionBiotype
ENSG00000062725 (APPBP2)
amyloid beta precursor protein (cytoplasmic tail) binding protein 2 		ENST00000083182 (APPBP2-001) 60443149-60526219 protein_coding
ENST00000585368 (APPBP2-003) 60494474-60526123 protein_coding
ENST00000588668 (APPBP2-004) 60479162-60525938 nonsense_mediated_decay
ENST00000589341 (APPBP2-002) 60447746-60526132 nonsense_mediated_decay
ENST00000590244 (APPBP2-005) 60466351-60526098 processed_transcript
ENST00000592995 (APPBP2-006) 60459507-60465161 processed_transcript
ENSG00000141371 (C17orf64)
chromosome 17 open reading frame 64 		ENST00000269127 (C17orf64-001) 60422509-60431421 protein_coding
ENST00000461535 (C17orf64-005) 60392429-60425871 protein_coding
ENST00000464714 (C17orf64-003) 60422535-60426408 retained_intron
ENST00000474834 (C17orf64-002) 60421742-60426794 protein_coding
ENSG00000170832 (USP32)
ubiquitin specific peptidase 32 		ENST00000300896 (USP32-001) 60179094-60392134 protein_coding
ENST00000393003 (USP32-003) 60249058-60391975 protein_coding
ENST00000585720 (USP32-011) 60207729-60208813 retained_intron
ENST00000586238 (USP32-012) 60183186-60185933 retained_intron
ENST00000586881 (USP32-006) 60301599-60305228 processed_transcript
ENST00000587651 (USP32-009) 60219571-60226149 retained_intron
ENST00000588898 (USP32-014) 60294683-60422470 protein_coding
ENST00000589335 (USP32-007) 60226183-60392230 protein_coding
ENST00000589552 (USP32-010) 60219636-60226231 nonsense_mediated_decay
ENST00000589761 (USP32-005) 60301450-60391928 retained_intron
ENST00000590133 (USP32-002) 60209417-60392408 protein_coding
ENST00000590297 (USP32-015) 60421208-60422337 protein_coding
ENST00000591768 (USP32-008) 60213581-60226063 protein_coding
ENST00000592339 (USP32-004) 60179105-60256700 protein_coding
ENST00000593071 (USP32-013) 60179111-60181673 protein_coding
ENSG00000213228 (RPL12P38)
ribosomal protein L12 pseudogene 38 		ENST00000471280 (RPL12P38-001) 60433723-60434212 transcribed_processed_pseudogene
ENST00000588627 (RPL12P38-002) 60433678-60435996 processed_transcript
ENSG00000270553 (RP11-15E18.5)
 ENST00000605540 (RP11-15E18.5-001) 60513190-60513550 processed_pseudogene
CIL_000701_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018479-ENSMUSG00000018481 CGP 10090 11:85170404-85235130
GeneTranscriptPositionBiotype
ENSMUSG00000018479 (1700125H20Rik)
RIKEN cDNA 1700125H20 gene 		ENSMUST00000018623 (1700125H20Rik-001) 85171096-85181145 protein_coding
ENSMUST00000100681 (1700125H20Rik-002) 85170404-85181145 protein_coding
ENSMUSG00000018481 (Appbp2)
amyloid beta precursor protein (cytoplasmic tail) binding protein 2 		ENSMUST00000018625 (Appbp2-001) 85187262-85235130 protein_coding
ENSMUSG00000048248 (Appbp2os)
 ENSMUST00000050015 (Appbp2os-201) 85234775-85235223 pseudogene
ENSMUSG00000080791 (Akirin1-ps)
akirin 1, pseudogene 		ENSMUST00000119676 (Akirin1-ps-001) 85216597-85217054 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000701_0001ENSG00000062725ENST00000083182ENST00000589341ENSG00000141371ENST00000269127ENST00000461535ENST00000474834ENSG00000170832ENST00000300896ENST00000393003ENST00000590133ENST00000592339ENST00000593071ENSG00000213228ENST00000471280ENST00000588627ENSG00000270553ENST00000605540CIL_000701_0002ENSMUSG00000018479ENSMUST00000018623ENSMUST00000100681ENSMUSG00000018481ENSMUST00000018625ENSMUSG00000048248ENSMUST00000050015ENSMUSG00000080791ENSMUST00000119676
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000062725 ENST00000083182 2.679±0.00 1.004±0.00 N/A 4.536±0.00 2.688±1.40 1.875±0.78 1.710±1.02 4.496±0.00 3.286±2.80 2.416±1.38 0.278±0.00 4.028±2.17 2.016±1.21 5.223±0.00
ENST00000585368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589341 N/A N/A 1.994±0.00 N/A 2.551±0.00 2.632±0.00 0.783±0.00 N/A N/A 2.456±0.63 1.488±0.00 3.282±0.94 5.432±0.00 25.504±12.53
ENST00000590244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141371 ENST00000269127 0.113±0.00 0.233±0.00 N/A 0.024±0.00 0.301±0.00 0.021±0.00 N/A N/A N/A N/A N/A 0.089±0.00 N/A 75.130±30.26
ENST00000461535 N/A 0.678±0.00 N/A N/A N/A N/A N/A 0.658±0.00 N/A N/A N/A N/A N/A N/A
ENST00000464714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474834 0.224±0.00 N/A N/A N/A N/A N/A N/A 0.069±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000170832 ENST00000300896 2.518±0.00 1.719±0.00 2.095±0.00 3.104±1.57 1.720±0.60 1.357±0.78 2.373±0.00 1.276±0.00 1.099±0.57 3.795±0.29 3.045±0.00 2.613±0.80 2.275±1.60 25.071±9.29
ENST00000393003 N/A N/A N/A N/A N/A N/A 0.831±0.00 1.126±0.00 N/A N/A N/A N/A N/A N/A
ENST00000585720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590133 N/A N/A N/A 2.821±0.00 2.055±0.00 N/A N/A N/A 3.934±0.00 3.790±0.00 N/A 3.100±0.00 N/A N/A
ENST00000590297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592339 N/A N/A N/A N/A N/A N/A N/A N/A 0.828±0.00 N/A N/A 0.621±0.00 0.659±0.17 N/A
ENST00000593071 N/A 6.281±0.00 N/A N/A 4.050±0.00 5.661±0.00 N/A 4.537±1.16 2.525±0.00 N/A N/A N/A N/A 32.011±0.00
ENSG00000213228 ENST00000471280 N/A N/A N/A N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A 0.113±0.05 N/A 0.196±0.00
ENST00000588627 2.726±0.00 2.682±0.00 N/A 1.236±1.10 3.065±0.00 4.175±0.00 0.340±0.25 3.904±0.00 0.702±0.00 3.062±0.00 2.084±0.00 0.197±0.07 0.018±0.00 2.182±2.06
ENSG00000270553 ENST00000605540 0.064±0.00 0.032±0.00 0.259±0.00 0.032±0.00 N/A 0.281±0.25 0.242±0.10 0.450±0.00 0.609±0.53 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018479 ENSMUST00000018623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 6.757±2.65
ENSMUST00000100681 N/A N/A 0.029±0.00 0.073±0.02 N/A N/A N/A N/A 0.034±0.03 0.067±0.00 N/A 0.552±0.16 0.812±0.58 23.425±0.00
ENSMUSG00000018481 ENSMUST00000018625 8.613±2.22 8.257±0.84 10.875±0.06 14.272±5.16 5.552±2.10 4.748±1.70 3.567±0.63 7.573±0.28 5.538±1.86 6.608±2.53 2.066±0.24 10.107±4.43 16.096±5.12 6.626±1.84
ENSMUSG00000048248 ENSMUST00000050015 18.633±0.00 83.308±21.87 N/A N/A 31.899±1.43 25.455±3.78 N/A 16.302±1.69 7.497±1.71 20.669±6.74 N/A 90.682±13.94 N/A N/A
ENSMUSG00000080791 ENSMUST00000119676 0.155±0.00 0.166±0.00 0.119±0.03 0.323±0.12 N/A 0.212±0.07 0.168±0.06 0.123±0.00 0.157±0.06 0.133±0.00 N/A 0.380±0.03 0.321±0.07 0.206±0.06

Loading