C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00071R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059917-ENSDARG00000090188 CGP 7955 13:51429579-51487917
GeneTranscriptPositionBiotype
ENSDARG00000059917 (CCNJ)
cyclin J 		ENSDART00000083857 (CCNJ-201) 51429579-51438930 protein_coding
ENSDARG00000075190 (CABZ01073654.1)
 ENSDART00000111171 (CABZ01073654.1-201) 51446155-51446569 pseudogene
ENSDARG00000090188 (ZNF518A (2 of 2))
zinc finger protein 518A 		ENSDART00000125420 (ZNF518A (2 of 2)-201) 51475155-51487917 protein_coding
CIL_00071R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107443-ENSG00000177853 CGP 9606 10:96043394-96205288
GeneTranscriptPositionBiotype
ENSG00000095585 (BLNK)
B-cell linker 		ENST00000224337 (BLNK-001) 96191702-96271540 protein_coding
ENST00000371176 (BLNK-002) 96191702-96271540 protein_coding
ENST00000413476 (BLNK-201) 96191707-96271516 protein_coding
ENST00000427367 (BLNK-202) 96191707-96271516 protein_coding
ENST00000467799 (BLNK-004) 96204532-96271587 nonsense_mediated_decay
ENST00000468252 (BLNK-007) 96204597-96210303 retained_intron
ENST00000472763 (BLNK-005) 96215849-96227497 retained_intron
ENST00000485193 (BLNK-006) 96199966-96204854 retained_intron
ENST00000495266 (BLNK-003) 96238888-96271398 protein_coding
ENSG00000107443 (CCNJ)
cyclin J 		ENST00000265992 (CCNJ-003) 96043394-96060870 protein_coding
ENST00000403870 (CCNJ-004) 96043394-96059588 protein_coding
ENST00000465148 (CCNJ-002) 96043583-96059588 protein_coding
ENSG00000177853 (ZNF518A)
zinc finger protein 518A 		ENST00000316045 (ZNF518A-006) 96129715-96162742 protein_coding
ENST00000442635 (ZNF518A-008) 96156013-96204129 processed_transcript
ENST00000478086 (ZNF518A-002) 96130056-96157337 protein_coding
ENST00000484770 (ZNF518A-004) 96130679-96132909 retained_intron
ENST00000488700 (ZNF518A-003) 96129735-96156019 processed_transcript
ENST00000534948 (ZNF518A-001) 96155343-96163761 retained_intron
ENST00000539666 (ZNF518A-005) 96130056-96151566 processed_transcript
ENST00000563195 (ZNF518A-007) 96130072-96205288 processed_transcript
ENST00000614149 (ZNF518A-201) 96151409-96163752 protein_coding
ENST00000624776 (ZNF518A-202) 96130056-96163752 protein_coding
ENSG00000229417 (NPM1P25)
nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 25 		ENST00000429734 (NPM1P25-001) 96189366-96190219 processed_pseudogene
ENSG00000266407 (MIR3157)
microRNA 3157 		ENST00000578688 (MIR3157-201) 96064315-96064399 miRNA
CIL_00071R_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025010-ENSMUSG00000049164 CGP 10090 19:40831279-40917947
GeneTranscriptPositionBiotype
ENSMUSG00000025010 (Ccnj)
cyclin J 		ENSMUST00000025983 (Ccnj-001) 40831279-40848572 protein_coding
ENSMUST00000119316 (Ccnj-002) 40831308-40848009 protein_coding
ENSMUST00000120057 (Ccnj-003) 40831279-40848572 protein_coding
ENSMUSG00000049164 (Zfp518a)
zinc finger protein 518A 		ENSMUST00000050092 (Zfp518a-201) 40894705-40917947 protein_coding
ENSMUSG00000097740 (E030044B06Rik)
RIKEN cDNA E030044B06 gene 		ENSMUST00000181195 (E030044B06Rik-201) 40868386-40874071 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071R_0001ENSDARG00000059917ENSDART00000083857ENSDARG00000075190ENSDART00000111171ENSDARG00000090188ENSDART00000125420CIL_00071R_0002ENSG00000095585ENST00000224337ENST00000371176ENST00000413476ENST00000427367ENST00000467799ENST00000468252ENST00000472763ENST00000485193ENST00000495266ENSG00000107443ENST00000265992ENST00000403870ENST00000465148ENSG00000177853ENST00000316045ENST00000442635ENST00000478086ENST00000484770ENST00000488700ENST00000534948ENST00000539666ENST00000563195ENST00000614149ENST00000624776ENSG00000229417ENST00000429734ENSG00000266407ENST00000578688CIL_00071R_0003ENSMUSG00000025010ENSMUST00000025983ENSMUST00000119316ENSMUST00000120057ENSMUSG00000049164ENSMUST00000050092ENSMUSG00000097740ENSMUST00000181195
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071R_0001ENSDARG00000059917ENSDART00000083857ENSDARG00000075190ENSDART00000111171ENSDARG00000090188ENSDART00000125420CIL_00071R_0002ENSG00000095585ENST00000224337ENST00000371176ENSG00000107443ENST00000265992ENST00000403870ENST00000465148ENSG00000177853ENST00000316045ENST00000534948ENST00000614149ENST00000624776ENSG00000229417ENST00000429734ENSG00000266407ENST00000578688CIL_00071R_0003ENSMUSG00000025010ENSMUST00000025983ENSMUST00000119316ENSMUST00000120057ENSMUSG00000049164ENSMUST00000050092ENSMUSG00000097740ENSMUST00000181195
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000059917 ENSDART00000083857 N/A N/A N/A 0.139±0.02 N/A N/A 0.126±0.06 0.211±0.00 0.134±0.00 N/A N/A N/A N/A N/A
ENSDARG00000075190 ENSDART00000111171 N/A N/A N/A 0.288±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000090188 ENSDART00000125420 N/A N/A N/A 0.259±0.10 N/A N/A 0.252±0.11 0.504±0.00 0.018±0.00 N/A 0.026±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000095585 ENST00000224337 N/A 8.488±0.00 2.528±0.00 N/A N/A N/A N/A 3.883±1.74 9.132±0.00 N/A N/A 3.397±0.00 2.312±0.17 N/A
ENST00000371176 N/A N/A N/A N/A N/A 1.219±0.00 N/A 6.211±0.00 N/A N/A N/A N/A 1.131±0.17 N/A
ENST00000413476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000107443 ENST00000265992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.055±0.00 1.255±0.00
ENST00000403870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.210±0.00 N/A N/A
ENST00000465148 N/A N/A 0.299±0.00 0.254±0.00 1.760±0.00 0.776±0.00 0.305±0.11 0.639±0.00 0.306±0.00 N/A 0.367±0.01 1.414±0.38 N/A 1.405±0.00
ENSG00000177853 ENST00000316045 0.715±0.00 1.037±0.00 1.008±0.00 0.943±0.13 1.437±0.02 1.377±0.82 0.801±0.28 1.861±0.43 1.148±0.62 1.759±1.13 0.279±0.01 2.244±0.55 0.801±0.55 6.173±0.75
ENST00000442635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534948 0.340±0.00 0.747±0.00 1.015±0.00 0.377±0.00 1.097±0.79 2.347±0.00 N/A 0.752±0.08 1.423±0.00 2.018±0.00 0.201±0.00 2.018±1.44 N/A 1.316±0.00
ENST00000539666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614149 N/A N/A 0.465±0.00 N/A N/A N/A 0.356±0.00 N/A N/A 0.266±0.00 N/A 1.599±0.61 N/A 0.795±0.00
ENST00000624776 N/A N/A N/A N/A N/A N/A N/A N/A 0.307±0.00 N/A N/A N/A N/A N/A
ENSG00000229417 ENST00000429734 0.050±0.00 1.258±0.00 1.006±0.00 0.115±0.06 0.365±0.24 0.920±0.56 0.073±0.05 0.401±0.00 0.399±0.04 0.137±0.12 0.104±0.00 0.349±0.33 0.462±0.32 0.168±0.07
ENSG00000266407 ENST00000578688 N/A N/A N/A N/A 2.908±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025010 ENSMUST00000025983 2.576±0.67 5.880±1.04 1.847±0.14 6.416±1.07 4.202±0.85 3.268±0.61 1.224±0.58 1.500±0.48 2.009±0.50 7.836±0.98 0.770±0.38 5.452±2.67 2.378±0.86 0.432±0.20
ENSMUST00000119316 0.813±0.20 1.749±0.39 0.626±0.14 1.991±0.40 1.661±0.45 0.624±0.25 0.731±0.12 0.495±0.21 0.373±0.16 1.384±0.09 0.291±0.00 1.094±0.41 0.497±0.23 0.318±0.10
ENSMUST00000120057 0.366±0.00 N/A N/A 1.504±0.44 1.659±0.71 0.897±0.38 1.032±0.29 0.336±0.10 0.410±0.08 2.304±0.35 0.604±0.07 1.873±0.79 0.661±0.21 0.210±0.02
ENSMUSG00000049164 ENSMUST00000050092 1.017±0.36 0.748±0.30 0.854±0.13 0.916±0.53 0.963±0.24 0.854±0.31 0.580±0.16 0.670±0.20 0.612±0.47 1.170±0.14 0.516±0.09 1.218±0.89 3.417±0.97 0.957±0.48
ENSMUSG00000097740 ENSMUST00000181195 0.102±0.05 0.113±0.05 N/A 0.150±0.00 0.141±0.08 0.061±0.03 0.348±0.06 0.083±0.02 0.054±0.03 0.497±0.07 0.053±0.01 0.224±0.14 0.557±0.42 0.690±0.44

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