C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00072U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042418-ENSDARG00000088898 CGP 7955 15:15540800-15723432
GeneTranscriptPositionBiotype
ENSDARG00000042418 (wbscr17)
Williams-Beuren syndrome chromosome region 17 		ENSDART00000062191 (wbscr17-001) 15540800-15565487 protein_coding
ENSDARG00000088898 (CALN1 (2 of 2))
calneuron 1 		ENSDART00000126185 (CALN1 (2 of 2)-201) 15584813-15720908 protein_coding
ENSDART00000155163 (CALN1 (2 of 2)-001) 15583707-15723432 protein_coding
ENSDARG00000096845 (si:dkey-148c4.3)
si:dkey-148c4.3 		ENSDART00000157230 (si:dkey-148c4.3-001) 15716530-15716931 sense_intronic

Danio rerio Ensembl (Zv9)

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CIL_00072U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185274-ENSG00000183166 CGP 9606 7:71132169-72447151
GeneTranscriptPositionBiotype
ENSG00000183166 (CALN1)
calneuron 1 		ENST00000329008 (CALN1-004) 71779491-72336995 protein_coding
ENST00000395275 (CALN1-006) 71779491-72412373 protein_coding
ENST00000395276 (CALN1-005) 71779491-72447061 protein_coding
ENST00000405452 (CALN1-201) 71779492-71810495 protein_coding
ENST00000431984 (CALN1-007) 71787775-72447151 protein_coding
ENST00000446128 (CALN1-008) 72023657-72337751 protein_coding
ENSG00000185274 (WBSCR17)
Williams-Beuren syndrome chromosome region 17 		ENST00000333538 (WBSCR17-001) 71132169-71713599 protein_coding
ENST00000447516 (WBSCR17-004) 71300331-71415931 protein_coding
ENST00000467723 (WBSCR17-002) 71300742-71713598 processed_transcript
ENST00000498380 (WBSCR17-003) 71283996-71713600 processed_transcript
ENST00000618959 (WBSCR17-201) 71335549-71713598 protein_coding
ENSG00000199940 (RN7SKP75)
RNA, 7SK small nuclear pseudogene 75 		ENST00000363070 (RN7SKP75-201) 71685452-71685747 misc_RNA
ENSG00000235581 (GS1-111G14.1)
 ENST00000455206 (GS1-111G14.1-001) 71942259-71942468 processed_pseudogene
ENSG00000257902 (AC073330.1)
 ENST00000552393 (AC073330.1-201) 71617332-71617439 miRNA
ENSG00000266688 (AC079398.1)
 ENST00000581603 (AC079398.1-201) 71310459-71310551 miRNA

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00072U_0001ENSDARG00000042418ENSDART00000062191ENSDARG00000088898ENSDART00000126185ENSDART00000155163ENSDARG00000096845ENSDART00000157230CIL_00072U_0002ENSG00000183166ENST00000329008ENST00000395275ENST00000395276ENST00000405452ENST00000431984ENST00000446128ENSG00000185274ENST00000333538ENST00000447516ENST00000467723ENST00000498380ENST00000618959ENSG00000199940ENST00000363070ENSG00000235581ENST00000455206ENSG00000257902ENST00000552393ENSG00000266688ENST00000581603
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00072U_0001ENSDARG00000042418ENSDART00000062191ENSDARG00000088898ENSDART00000126185ENSDART00000155163ENSDARG00000096845ENSDART00000157230CIL_00072U_0002ENSG00000183166ENST00000329008ENST00000395275ENST00000395276ENST00000405452ENST00000431984ENST00000446128ENSG00000185274ENST00000333538ENST00000498380ENST00000618959ENSG00000199940ENST00000363070ENSG00000235581ENST00000455206ENSG00000257902ENST00000552393ENSG00000266688ENST00000581603
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042418 ENSDART00000062191 N/A N/A N/A 11.842±6.97 N/A N/A 0.063±0.01 0.188±0.11 N/A N/A 0.535±0.00 N/A N/A N/A
ENSDARG00000088898 ENSDART00000126185 N/A N/A N/A N/A N/A N/A 0.319±0.00 N/A 0.051±0.00 N/A N/A N/A N/A N/A
ENSDART00000155163 N/A N/A N/A 3.385±3.00 N/A N/A N/A 0.195±0.00 0.043±0.00 N/A 0.220±0.00 N/A N/A N/A
ENSDARG00000096845 ENSDART00000157230 N/A N/A N/A 0.945±0.22 N/A N/A N/A N/A 0.251±0.00 N/A 0.404±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000183166 ENST00000329008 N/A N/A N/A 4.821±0.18 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.588±0.27
ENST00000395276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.541±0.00
ENST00000405452 0.031±0.00 0.067±0.00 0.006±0.00 N/A 0.046±0.02 0.018±0.00 0.018±0.00 0.032±0.01 0.046±0.03 0.041±0.02 0.003±0.00 0.018±0.02 0.072±0.00 N/A
ENST00000431984 N/A N/A N/A N/A 0.373±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.849±2.07
ENST00000446128 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.003±0.00 N/A N/A N/A N/A
ENSG00000185274 ENST00000333538 2.016±0.00 0.357±0.00 0.333±0.00 10.724±6.63 0.777±0.37 3.899±3.72 11.430±10.71 1.677±0.00 2.410±0.00 2.501±1.81 0.810±0.00 4.659±3.53 0.676±0.51 3.939±0.72
ENST00000447516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498380 N/A 0.171±0.00 N/A N/A 0.167±0.00 N/A 0.560±0.00 N/A N/A N/A N/A N/A N/A 0.393±0.00
ENST00000618959 N/A 0.530±0.00 N/A 11.480±6.71 0.091±0.00 0.624±0.51 3.116±2.40 N/A 1.213±1.16 0.464±0.00 0.501±0.00 5.111±3.08 0.452±0.10 4.292±0.00
ENSG00000199940 ENST00000363070 N/A N/A N/A 0.210±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000235581 ENST00000455206 N/A 0.159±0.00 N/A N/A 0.361±0.00 N/A N/A N/A N/A N/A 0.150±0.00 N/A N/A N/A
ENSG00000257902 ENST00000552393 0.395±0.00 0.209±0.00 N/A 0.212±0.00 0.214±0.00 N/A 0.569±0.00 N/A 0.582±0.00 0.630±0.00 N/A N/A N/A N/A
ENSG00000266688 ENST00000581603 N/A 0.868±0.00 N/A 0.651±0.00 N/A N/A 0.203±0.00 N/A N/A N/A N/A N/A N/A N/A

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