C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00073H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000108599-ENSG00000128487 CGP 9606 17:19904302-20319026
GeneTranscriptPositionBiotype
ENSG00000108599 (AKAP10)
A kinase (PRKA) anchor protein 10 		ENST00000225737 (AKAP10-001) 19904302-19977837 protein_coding
ENST00000395536 (AKAP10-005) 19906227-19977679 protein_coding
ENST00000460046 (AKAP10-014) 19936002-19947475 nonsense_mediated_decay
ENST00000474245 (AKAP10-003) 19947141-19958124 retained_intron
ENST00000571858 (AKAP10-007) 19962860-19977828 nonsense_mediated_decay
ENST00000572155 (AKAP10-004) 19958335-19978343 processed_transcript
ENST00000572341 (AKAP10-009) 19958425-19977828 nonsense_mediated_decay
ENST00000576896 (AKAP10-008) 19958444-19977828 protein_coding
ENST00000578898 (AKAP10-015) 19906168-19931877 nonsense_mediated_decay
ENST00000582611 (AKAP10-010) 19940898-19977828 nonsense_mediated_decay
ENST00000583951 (AKAP10-013) 19909239-19931866 protein_coding
ENSG00000128487 (SPECC1)
sperm antigen with calponin homology and coiled-coil domains 1 		ENST00000261503 (SPECC1-018) 20087022-20314755 protein_coding
ENST00000395522 (SPECC1-003) 20156083-20237610 protein_coding
ENST00000395525 (SPECC1-026) 20156089-20237179 protein_coding
ENST00000395527 (SPECC1-027) 20009363-20314138 protein_coding
ENST00000395529 (SPECC1-002) 20087021-20239427 protein_coding
ENST00000395530 (SPECC1-004) 20155989-20319026 protein_coding
ENST00000413167 (SPECC1-007) 20073565-20204465 processed_transcript
ENST00000467722 (SPECC1-008) 20155994-20232405 nonsense_mediated_decay
ENST00000472876 (SPECC1-006) 20009344-20236904 processed_transcript
ENST00000492188 (SPECC1-005) 20305652-20314734 retained_intron
ENST00000578153 (SPECC1-021) 20297034-20306173 protein_coding
ENST00000578321 (SPECC1-014) 20009863-20096708 protein_coding
ENST00000579688 (SPECC1-010) 20155742-20204657 processed_transcript
ENST00000580934 (SPECC1-017) 20095693-20110500 protein_coding
ENST00000581399 (SPECC1-001) 20205536-20314710 protein_coding
ENST00000581973 (SPECC1-016) 20095692-20204356 protein_coding
ENST00000582063 (SPECC1-012) 20155338-20204738 processed_transcript
ENST00000582226 (SPECC1-029) 20205740-20237176 protein_coding
ENST00000582604 (SPECC1-015) 20017145-20096715 protein_coding
ENST00000583463 (SPECC1-020) 20009379-20204447 protein_coding
ENST00000583482 (SPECC1-025) 20009364-20204352 protein_coding
ENST00000583528 (SPECC1-024) 20009366-20110513 protein_coding
ENST00000584527 (SPECC1-028) 20205796-20237148 protein_coding
ENSG00000212186 (RNU6-258P)
RNA, U6 small nuclear 258, pseudogene 		ENST00000390884 (RNU6-258P-201) 20126388-20126488 snRNA
ENSG00000225014 (KCTD9P1)
potassium channel tetramerization domain containing 9 pseudogene 1 		ENST00000430462 (KCTD9P1-001) 20111824-20112990 transcribed_processed_pseudogene
ENSG00000225681 (AC005730.2)
 ENST00000434406 (AC005730.2-001) 20056287-20056630 transcribed_processed_pseudogene
ENSG00000252971 (RNU6-1057P)
RNA, U6 small nuclear 1057, pseudogene 		ENST00000517162 (RNU6-1057P-201) 20290257-20290358 snRNA
ENSG00000261033 (RP11-209D14.2)
 ENST00000564549 (RP11-209D14.2-001) 20008051-20009234 antisense
ENSG00000263494 (AC004702.2)
 ENST00000580225 (AC004702.2-001) 20185082-20322973 lincRNA
ENSG00000266126 (RP11-209D14.4)
 ENST00000583067 (RP11-209D14.4-001) 19929372-19929737 sense_intronic
CIL_00073H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047804-ENSMUSG00000042331 CGP 10090 11:61871307-62223013
GeneTranscriptPositionBiotype
ENSMUSG00000042331 (Specc1)
sperm antigen with calponin homology and coiled-coil domains 1 		ENSMUST00000049836 (Specc1-001) 61956779-62141726 protein_coding
ENSMUST00000092415 (Specc1-002) 62077024-62223005 protein_coding
ENSMUST00000108709 (Specc1-201) 62029276-62223013 protein_coding
ENSMUST00000136971 (Specc1-003) 61956810-62045484 processed_transcript
ENSMUSG00000047804 (Akap10)
A kinase (PRKA) anchor protein 10 		ENSMUST00000058173 (Akap10-002) 61889790-61916218 protein_coding
ENSMUST00000102650 (Akap10-001) 61871307-61930252 protein_coding
ENSMUST00000108710 (Akap10-003) 61891777-61930226 protein_coding
ENSMUST00000137323 (Akap10-004) 61871672-61878450 processed_transcript
ENSMUST00000143952 (Akap10-005) 61921898-61930207 processed_transcript
ENSMUSG00000083212 (Gm12274)
predicted gene 12274 		ENSMUST00000120062 (Gm12274-001) 61973966-61974350 processed_pseudogene
ENSMUSG00000084805 (Gm12273)
predicted gene 12273 		ENSMUST00000137418 (Gm12273-001) 61950915-61952736 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00073H_0001ENSG00000108599ENST00000225737ENST00000395536ENST00000460046ENST00000474245ENST00000571858ENST00000572155ENST00000572341ENST00000576896ENST00000578898ENST00000582611ENST00000583951ENSG00000128487ENST00000261503ENST00000395522ENST00000395525ENST00000395527ENST00000395529ENST00000395530ENST00000413167ENST00000467722ENST00000472876ENST00000492188ENST00000578153ENST00000578321ENST00000579688ENST00000580934ENST00000581399ENST00000581973ENST00000582063ENST00000582226ENST00000582604ENST00000583463ENST00000583482ENST00000583528ENST00000584527ENSG00000212186ENST00000390884ENSG00000225014ENST00000430462ENSG00000225681ENST00000434406ENSG00000252971ENST00000517162ENSG00000261033ENST00000564549ENSG00000263494ENST00000580225ENSG00000266126ENST00000583067CIL_00073H_0002ENSMUSG00000042331ENSMUST00000049836ENSMUST00000092415ENSMUST00000108709ENSMUST00000136971ENSMUSG00000047804ENSMUST00000058173ENSMUST00000102650ENSMUST00000108710ENSMUST00000137323ENSMUST00000143952ENSMUSG00000083212ENSMUST00000120062ENSMUSG00000084805ENSMUST00000137418
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00073H_0001ENSG00000108599ENST00000225737ENST00000395536ENST00000460046ENST00000582611ENSG00000128487ENST00000261503ENST00000395522ENST00000395525ENST00000395527ENST00000395529ENST00000395530ENST00000581399ENST00000583528ENSG00000212186ENST00000390884ENSG00000225014ENST00000430462ENSG00000225681ENST00000434406ENSG00000252971ENST00000517162ENSG00000261033ENST00000564549ENSG00000263494ENST00000580225ENSG00000266126ENST00000583067CIL_00073H_0002ENSMUSG00000042331ENSMUST00000049836ENSMUST00000092415ENSMUST00000108709ENSMUSG00000047804ENSMUST00000058173ENSMUST00000102650ENSMUST00000108710ENSMUST00000137323ENSMUST00000143952ENSMUSG00000083212ENSMUST00000120062ENSMUSG00000084805ENSMUST00000137418
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108599 ENST00000225737 3.533±0.00 5.501±0.00 2.062±0.00 4.047±0.07 1.673±0.00 1.881±0.84 0.839±0.50 1.715±0.00 2.055±0.83 2.710±0.88 1.206±0.00 2.625±0.84 2.631±0.35 1.074±0.00
ENST00000395536 N/A N/A N/A N/A 2.425±0.00 N/A 0.721±0.01 N/A N/A N/A N/A N/A N/A N/A
ENST00000460046 N/A N/A N/A N/A N/A 5.065±0.00 N/A N/A N/A N/A N/A 2.748±0.00 N/A 3.287±0.00
ENST00000474245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582611 N/A N/A 1.323±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000128487 ENST00000261503 1.226±0.00 N/A N/A 4.868±0.00 N/A 1.244±0.00 0.809±0.00 0.744±0.00 N/A 2.081±0.00 0.376±0.00 2.453±1.50 1.162±0.44 N/A
ENST00000395522 N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.00 1.196±0.00 N/A N/A N/A N/A
ENST00000395525 N/A N/A 6.478±0.00 18.827±0.00 10.847±0.00 6.229±0.00 2.615±0.00 0.491±0.00 8.532±0.00 1.270±0.00 1.026±0.00 N/A 1.720±0.00 15.142±0.00
ENST00000395527 2.014±0.00 N/A N/A 5.997±0.00 N/A N/A 0.621±0.00 N/A 0.076±0.00 N/A N/A N/A 0.677±0.00 N/A
ENST00000395529 0.941±0.00 1.287±0.00 0.756±0.00 2.932±0.00 1.742±0.00 N/A N/A 0.556±0.00 N/A N/A N/A 1.462±1.04 0.549±0.14 N/A
ENST00000395530 0.655±0.00 N/A N/A 4.076±2.34 1.439±0.00 0.795±0.17 0.391±0.09 0.599±0.00 0.030±0.00 0.575±0.00 0.256±0.00 1.963±1.57 N/A 3.791±0.00
ENST00000413167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581399 N/A N/A N/A 10.565±0.00 N/A 2.355±0.00 N/A 1.954±0.00 0.087±0.00 1.357±0.00 N/A 4.444±1.67 2.177±1.01 13.962±3.46
ENST00000581973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583528 N/A N/A N/A N/A N/A N/A N/A N/A 0.421±0.00 N/A N/A N/A N/A N/A
ENST00000584527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212186 ENST00000390884 N/A N/A N/A N/A 0.616±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225014 ENST00000430462 N/A N/A 0.396±0.00 0.306±0.21 0.914±0.00 0.124±0.00 0.243±0.00 N/A 1.462±0.00 0.710±0.70 N/A 0.039±0.01 N/A 0.041±0.00
ENSG00000225681 ENST00000434406 N/A N/A N/A 0.132±0.07 0.647±0.00 N/A 0.438±0.00 N/A N/A N/A N/A 2.235±0.00 N/A N/A
ENSG00000252971 ENST00000517162 N/A N/A N/A 0.670±0.00 N/A N/A N/A N/A N/A 1.533±0.00 N/A N/A N/A 1.241±0.00
ENSG00000261033 ENST00000564549 0.147±0.00 0.345±0.00 0.152±0.00 1.088±0.14 0.127±0.00 0.099±0.00 0.050±0.00 N/A N/A N/A 0.387±0.00 0.066±0.01 0.022±0.00 2.354±0.73
ENSG00000263494 ENST00000580225 5.214±0.00 8.340±0.00 N/A 2.985±2.22 6.011±0.00 2.697±0.00 2.014±0.52 5.380±0.00 1.132±0.16 3.427±0.00 1.718±0.00 14.762±7.39 1.967±1.54 5.085±0.39
ENSG00000266126 ENST00000583067 0.159±0.00 0.090±0.00 N/A 0.062±0.00 N/A 2.372±0.00 N/A 0.204±0.00 N/A 1.495±1.04 N/A 0.246±0.13 0.269±0.02 0.211±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042331 ENSMUST00000049836 0.211±0.00 N/A 0.821±0.00 2.211±0.00 0.451±0.05 N/A 0.227±0.00 N/A 1.511±2.72 1.208±0.00 0.088±0.03 N/A N/A 0.928±0.00
ENSMUST00000092415 0.795±0.51 1.106±0.39 2.351±0.00 4.134±0.86 0.869±0.36 5.863±0.79 0.111±0.00 2.061±0.61 0.243±0.02 2.769±0.08 0.134±0.04 1.629±0.52 8.404±2.62 1.187±0.23
ENSMUST00000108709 0.360±0.03 N/A N/A 4.516±3.75 N/A N/A 0.347±0.00 1.515±0.00 10.905±3.98 2.592±0.00 0.158±0.02 0.691±0.35 N/A 0.896±0.00
ENSMUST00000136971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000047804 ENSMUST00000058173 N/A N/A N/A N/A N/A 1.415±0.00 0.778±0.00 N/A N/A N/A N/A 1.123±0.00 N/A N/A
ENSMUST00000102650 3.663±0.64 3.550±1.23 5.775±0.40 2.271±0.75 3.211±0.54 2.628±0.91 1.396±0.68 3.353±0.91 2.212±1.30 2.528±0.91 1.279±0.26 2.609±1.15 5.978±1.15 9.439±2.63
ENSMUST00000108710 N/A N/A N/A N/A 0.915±0.18 N/A N/A N/A 0.291±0.00 N/A N/A 0.888±0.33 N/A N/A
ENSMUST00000137323 4.637±0.76 9.233±1.63 N/A 2.327±0.85 4.630±1.38 5.738±0.93 1.844±0.59 5.822±0.51 2.482±0.70 5.080±1.41 N/A 5.491±2.06 1.743±0.00 4.422±0.00
ENSMUST00000143952 N/A 8.520±1.98 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083212 ENSMUST00000120062 N/A N/A N/A 0.205±0.06 N/A N/A N/A 0.233±0.06 1.150±0.70 N/A N/A N/A 0.044±0.00 0.137±0.01
ENSMUSG00000084805 ENSMUST00000137418 N/A N/A 0.008±0.00 0.055±0.00 N/A N/A N/A N/A 0.007±0.00 N/A N/A N/A N/A 0.075±0.02

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