C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00073T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124225-ENSG00000124237 CGP 9606 20:57648392-58161150
GeneTranscriptPositionBiotype
ENSG00000124237 (C20orf85)
chromosome 20 open reading frame 85 		ENST00000371168 (C20orf85-001) 58150904-58161150 protein_coding
ENSG00000203971 (RP13-379L11.2)
 ENST00000371169 (RP13-379L11.2-001) 57957126-57959660 lincRNA
ENSG00000270411 (RP13-379L11.3)
 ENST00000604803 (RP13-379L11.3-001) 58097267-58097591 processed_pseudogene
ENSG00000275852 (RP13-379L11.4)
 ENST00000616333 (RP13-379L11.4-001) 58003904-58004648 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00073T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038400-ENSMUSG00000027518 CGP 10090 2:173224458-173528501
GeneTranscriptPositionBiotype
ENSMUSG00000027518 (1700021F07Rik)
RIKEN cDNA 1700021F07 gene 		ENSMUST00000029023 (1700021F07Rik-001) 173522586-173528501 protein_coding
ENSMUSG00000038400 (Pmepa1)
prostate transmembrane protein, androgen induced 1 		ENSMUST00000036248 (Pmepa1-001) 173224458-173276533 protein_coding
ENSMUST00000124124 (Pmepa1-003) 173228211-173234722 retained_intron
ENSMUST00000139306 (Pmepa1-002) 173228046-173276189 protein_coding
ENSMUSG00000086114 (Gm14642)
predicted gene 14642 		ENSMUST00000147357 (Gm14642-001) 173394566-173395720 lincRNA
ENSMUSG00000087600 (Pmepa1os)
prostate transmembrane protein, androgen induced 1, opposite strand 		ENSMUST00000150185 (Pmepa1os-001) 173276698-173278428 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00073T_0001ENSG00000124237ENST00000371168ENSG00000203971ENST00000371169ENSG00000270411ENST00000604803ENSG00000275852ENST00000616333CIL_00073T_0002ENSMUSG00000027518ENSMUST00000029023ENSMUSG00000038400ENSMUST00000036248ENSMUST00000124124ENSMUST00000139306ENSMUSG00000086114ENSMUST00000147357ENSMUSG00000087600ENSMUST00000150185
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00073T_0001ENSG00000124237ENST00000371168ENSG00000203971ENST00000371169ENSG00000270411ENST00000604803ENSG00000275852ENST00000616333CIL_00073T_0002ENSMUSG00000027518ENSMUST00000029023ENSMUSG00000038400ENSMUST00000036248ENSMUST00000139306ENSMUSG00000086114ENSMUST00000147357ENSMUSG00000087600ENSMUST00000150185
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124237 ENST00000371168 N/A N/A N/A 0.029±0.00 0.433±0.00 0.065±0.00 N/A 0.027±0.00 N/A 38.751±36.28 N/A 17.146±29.18 N/A 48.601±15.11
ENSG00000203971 ENST00000371169 N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 0.031±0.00 0.086±0.05
ENSG00000270411 ENST00000604803 N/A N/A N/A N/A 0.791±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000275852 ENST00000616333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.645±0.13
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027518 ENSMUST00000029023 N/A N/A N/A N/A N/A N/A 0.061±0.00 0.061±0.00 N/A N/A N/A 0.229±0.07 0.054±0.02 121.718±52.04
ENSMUSG00000038400 ENSMUST00000036248 13.965±2.68 7.156±1.11 11.830±1.45 4.462±1.25 10.715±4.28 13.331±1.23 5.397±0.48 5.760±0.30 0.314±0.19 10.100±0.27 3.686±0.39 10.884±4.07 8.195±6.45 0.358±0.15
ENSMUST00000124124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139306 28.741±15.06 8.706±0.00 N/A 3.979±0.00 25.992±7.98 N/A 6.451±1.32 6.883±2.84 0.549±0.48 21.383±1.72 N/A 21.505±2.04 16.162±15.28 0.812±0.14
ENSMUSG00000086114 ENSMUST00000147357 N/A N/A 0.023±0.00 N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A 0.321±0.21 N/A
ENSMUSG00000087600 ENSMUST00000150185 0.129±0.08 N/A N/A N/A 0.134±0.06 N/A N/A 0.057±0.00 N/A 0.076±0.00 0.092±0.01 0.185±0.08 0.051±0.03 N/A

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