C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00074G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107105-ENSG00000205442 CGP 9606 9:23690104-24545946
GeneTranscriptPositionBiotype
ENSG00000107105 (ELAVL2)
ELAV like neuron-specific RNA binding protein 2 		ENST00000223951 (ELAVL2-002) 23690104-23821480 protein_coding
ENST00000380110 (ELAVL2-004) 23690104-23821275 protein_coding
ENST00000380117 (ELAVL2-001) 23691811-23826337 protein_coding
ENST00000397312 (ELAVL2-201) 23690107-23826065 protein_coding
ENST00000423281 (ELAVL2-005) 23701415-23735565 protein_coding
ENST00000440102 (ELAVL2-003) 23701523-23779375 protein_coding
ENST00000462649 (ELAVL2-006) 23765045-23826174 processed_transcript
ENST00000544538 (ELAVL2-202) 23690107-23821848 protein_coding
ENSG00000231460 (RP11-321L2.1)
 ENST00000423440 (RP11-321L2.1-001) 23829670-23849914 lincRNA
ENSG00000237414 (RP11-321L2.2)
 ENST00000446754 (RP11-321L2.2-001) 23894990-23898054 lincRNA
ENSG00000277608 (RP11-321L2.3)
 ENST00000612448 (RP11-321L2.3-001) 23955760-23956444 unprocessed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00074G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000008489-ENSMUSG00000028533 CGP 10090 4:91250763-92147234
GeneTranscriptPositionBiotype
ENSMUSG00000008489 (Elavl2)
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 		ENSMUST00000008633 (Elavl2-002) 91250763-91372054 protein_coding
ENSMUST00000102799 (Elavl2-001) 91250763-91399984 protein_coding
ENSMUST00000107109 (Elavl2-004) 91253240-91376434 protein_coding
ENSMUST00000107110 (Elavl2-008) 91250763-91372034 protein_coding
ENSMUST00000107111 (Elavl2-005) 91253240-91376434 protein_coding
ENSMUST00000107116 (Elavl2-007) 91253240-91313403 protein_coding
ENSMUST00000107118 (Elavl2-011) 91250763-91372069 protein_coding
ENSMUST00000107120 (Elavl2-003) 91250763-91376463 protein_coding
ENSMUST00000107124 (Elavl2-201) 91250769-91376496 protein_coding
ENSMUST00000128599 (Elavl2-012) 91253080-91254582 retained_intron
ENSMUST00000144769 (Elavl2-009) 91380432-91399976 processed_transcript
ENSMUST00000147611 (Elavl2-010) 91308677-91373030 protein_coding
ENSMUST00000176151 (Elavl2-006) 91399895-91400785 processed_transcript
ENSMUST00000176362 (Elavl2-015) 91308771-91371956 protein_coding
ENSMUST00000176469 (Elavl2-014) 91258666-91376307 retained_intron
ENSMUST00000177109 (Elavl2-013) 91264102-91356682 protein_coding
ENSMUSG00000028533 (Izumo3)
IZUMO family member 3 		ENSMUST00000107108 (Izumo3-002) 92144329-92147221 protein_coding
ENSMUST00000143542 (Izumo3-001) 92144338-92147234 protein_coding
ENSMUSG00000049494 (Gm12669)
 ENSMUST00000061216 (Gm12669-201) 91805349-91806561 pseudogene
ENSMUSG00000083377 (Gm12653)
predicted gene 12653 		ENSMUST00000117778 (Gm12653-001) 91365379-91365939 processed_pseudogene
ENSMUSG00000085817 (Gm12668)
predicted gene 12668 		ENSMUST00000134966 (Gm12668-001) 91626589-91630139 lincRNA
ENSMUSG00000086042 (Gm12670)
predicted gene 12670 		ENSMUST00000123606 (Gm12670-001) 91646315-91651152 lincRNA
ENSMUSG00000087517 (4930577H14Rik)
RIKEN cDNA 4930577H14 gene 		ENSMUST00000151367 (4930577H14Rik-001) 91938854-91939952 lincRNA
ENSMUSG00000095937 (Gm12671)
predicted gene 12671 		ENSMUST00000119978 (Gm12671-001) 91851668-91852669 processed_pseudogene
ENSMUSG00000100863 (RP23-239F1.2)
predicted gene 12669 		ENSMUST00000122162 (RP23-239F1.2-001) 91805547-91806555 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00074G_0001ENSG00000107105ENST00000223951ENST00000380110ENST00000380117ENST00000397312ENST00000423281ENST00000440102ENST00000462649ENST00000544538ENSG00000231460ENST00000423440ENSG00000237414ENST00000446754ENSG00000277608ENST00000612448CIL_00074G_0002ENSMUSG00000008489ENSMUST00000008633ENSMUST00000102799ENSMUST00000107109ENSMUST00000107110ENSMUST00000107111ENSMUST00000107116ENSMUST00000107118ENSMUST00000107120ENSMUST00000107124ENSMUST00000128599ENSMUST00000144769ENSMUST00000147611ENSMUST00000176151ENSMUST00000176362ENSMUST00000176469ENSMUST00000177109ENSMUSG00000028533ENSMUST00000107108ENSMUST00000143542ENSMUSG00000049494ENSMUST00000061216ENSMUSG00000083377ENSMUST00000117778ENSMUSG00000085817ENSMUST00000134966ENSMUSG00000086042ENSMUST00000123606ENSMUSG00000087517ENSMUST00000151367ENSMUSG00000095937ENSMUST00000119978ENSMUSG00000100863ENSMUST00000122162
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00074G_0001ENSG00000107105ENST00000223951ENST00000380110ENST00000380117ENST00000397312ENST00000423281ENST00000440102ENST00000462649ENST00000544538ENSG00000231460ENST00000423440ENSG00000237414ENST00000446754ENSG00000277608ENST00000612448CIL_00074G_0002ENSMUSG00000008489ENSMUST00000008633ENSMUST00000102799ENSMUST00000107109ENSMUST00000107110ENSMUST00000107111ENSMUST00000107116ENSMUST00000107118ENSMUST00000107120ENSMUST00000107124ENSMUST00000128599ENSMUST00000147611ENSMUST00000176362ENSMUST00000176469ENSMUST00000177109ENSMUSG00000028533ENSMUST00000107108ENSMUSG00000049494ENSMUST00000061216ENSMUSG00000083377ENSMUST00000117778ENSMUSG00000085817ENSMUST00000134966ENSMUSG00000086042ENSMUST00000123606ENSMUSG00000087517ENSMUST00000151367ENSMUSG00000095937ENSMUST00000119978ENSMUSG00000100863ENSMUST00000122162
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107105 ENST00000223951 N/A 0.027±0.00 N/A N/A N/A N/A 0.005±0.00 N/A N/A N/A N/A N/A N/A 8.628±3.28
ENST00000380110 N/A N/A 0.046±0.00 1.715±0.29 0.007±0.00 N/A 0.006±0.00 N/A N/A N/A N/A N/A N/A 2.397±0.00
ENST00000380117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.103±0.00 N/A N/A N/A
ENST00000397312 N/A N/A 0.007±0.00 4.880±0.00 0.021±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423281 0.144±0.00 0.470±0.00 N/A N/A 0.185±0.00 N/A 0.087±0.00 N/A 0.049±0.00 0.318±0.01 N/A N/A N/A N/A
ENST00000440102 N/A N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A N/A N/A 0.317±0.00 N/A 10.326±0.00
ENST00000462649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.876±0.00 N/A N/A
ENST00000544538 0.010±0.00 N/A N/A 3.652±0.00 N/A N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A 6.108±2.24
ENSG00000231460 ENST00000423440 N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.280±0.26
ENSG00000237414 ENST00000446754 0.412±0.00 1.707±0.00 N/A 1.159±0.00 0.894±0.59 0.269±0.00 0.446±0.22 0.512±0.41 0.494±0.19 0.163±0.12 0.165±0.00 0.941±1.01 0.360±0.39 3.529±2.22
ENSG00000277608 ENST00000612448 N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.189±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000008489 ENSMUST00000008633 N/A N/A 0.127±0.00 7.258±3.12 N/A N/A 0.049±0.00 0.084±0.00 0.036±0.00 N/A N/A 1.469±0.78 N/A 0.414±0.09
ENSMUST00000102799 N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000107109 N/A 0.220±0.07 N/A N/A N/A N/A N/A 0.047±0.00 0.032±0.00 N/A N/A 0.775±0.00 N/A N/A
ENSMUST00000107110 0.050±0.02 N/A N/A N/A 0.073±0.03 0.106±0.01 0.021±0.00 N/A 0.032±0.02 0.064±0.00 N/A 1.516±0.35 0.043±0.03 0.514±0.29
ENSMUST00000107111 0.030±0.00 N/A N/A N/A 0.046±0.01 N/A 0.057±0.00 N/A 0.055±0.00 0.035±0.00 N/A 0.943±0.00 0.048±0.00 0.434±0.04
ENSMUST00000107116 0.052±0.00 N/A N/A N/A N/A 0.141±0.00 0.089±0.02 0.056±0.02 N/A 0.035±0.00 N/A N/A 0.013±0.00 0.430±0.00
ENSMUST00000107118 N/A N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A 0.304±0.00
ENSMUST00000107120 N/A N/A N/A 5.899±3.22 N/A N/A N/A 0.042±0.00 0.087±0.00 N/A N/A 0.201±0.00 N/A N/A
ENSMUST00000107124 N/A 0.019±0.00 N/A 15.669±1.23 N/A 0.064±0.00 0.076±0.00 0.063±0.00 0.016±0.00 0.036±0.00 N/A N/A N/A N/A
ENSMUST00000128599 N/A N/A N/A N/A N/A 0.056±0.00 0.109±0.07 N/A 0.012±0.00 N/A N/A N/A N/A N/A
ENSMUST00000144769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147611 N/A 0.493±0.06 N/A N/A 0.165±0.00 0.204±0.12 0.114±0.00 0.270±0.08 N/A 0.118±0.00 N/A 5.392±2.68 N/A 2.695±0.60
ENSMUST00000176151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176362 N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176469 0.026±0.00 N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A 0.014±0.00 N/A
ENSMUST00000177109 N/A N/A N/A 61.090±0.00 N/A N/A 0.260±0.04 N/A 0.072±0.00 N/A N/A 4.350±0.00 0.166±0.00 4.153±0.00
ENSMUSG00000028533 ENSMUST00000107108 N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A 0.015±0.00 N/A 22.887±14.13
ENSMUST00000143542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049494 ENSMUST00000061216 2.066±0.00 1.087±0.73 0.073±0.00 0.290±0.04 0.979±0.18 0.693±0.27 0.421±0.37 0.557±0.21 0.875±0.85 0.311±0.00 0.176±0.07 0.809±0.67 N/A 2.603±0.08
ENSMUSG00000083377 ENSMUST00000117778 N/A N/A N/A 0.090±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.081±0.00
ENSMUSG00000085817 ENSMUST00000134966 0.167±0.10 0.140±0.00 0.050±0.02 0.961±1.24 0.270±0.27 0.150±0.01 0.067±0.00 0.226±0.10 0.072±0.05 0.369±0.10 0.103±0.02 0.905±1.47 0.253±0.18 0.758±0.62
ENSMUSG00000086042 ENSMUST00000123606 N/A N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 N/A 0.182±0.05
ENSMUSG00000087517 ENSMUST00000151367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.788±1.40
ENSMUSG00000095937 ENSMUST00000119978 N/A N/A N/A 42.227±0.00 N/A N/A N/A N/A 70.064±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000100863 ENSMUST00000122162 1.584±0.65 0.292±0.31 0.318±0.05 1.241±0.00 0.924±0.22 0.510±0.48 0.755±0.06 0.584±0.25 1.013±1.17 0.320±0.14 0.148±0.10 0.891±0.96 0.234±0.16 1.948±0.68

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