C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00074I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137055-ENSG00000096872 CGP 9606 9:26904083-27062930
GeneTranscriptPositionBiotype
ENSG00000096872 (IFT74)
intraflagellar transport 74 		ENST00000380062 (IFT74-001) 26956373-27062930 protein_coding
ENST00000429045 (IFT74-004) 26956479-27036800 protein_coding
ENST00000433700 (IFT74-201) 26947039-27062925 protein_coding
ENST00000443698 (IFT74-202) 26947312-27062925 protein_coding
ENST00000482986 (IFT74-003) 27028808-27048272 retained_intron
ENST00000494236 (IFT74-002) 26983832-26988697 retained_intron
ENST00000517444 (IFT74-008) 26947300-26984331 protein_coding
ENST00000517866 (IFT74-005) 26976567-26990164 protein_coding
ENST00000518614 (IFT74-006) 26956412-26984276 protein_coding
ENST00000519968 (IFT74-007) 26947039-26988728 protein_coding
ENSG00000137055 (PLAA)
phospholipase A2-activating protein 		ENST00000397292 (PLAA-001) 26904083-26947463 protein_coding
ENST00000487173 (PLAA-002) 26907610-26919374 protein_coding
ENST00000517642 (PLAA-005) 26905883-26923233 protein_coding
ENST00000520641 (PLAA-007) 26916456-26919461 processed_transcript
ENST00000520884 (PLAA-006) 26907803-26947233 protein_coding
ENST00000521968 (PLAA-004) 26919193-26920346 retained_intron
ENST00000523212 (PLAA-003) 26925893-26946983 protein_coding
ENSG00000184434 (LRRC19)
leucine rich repeat containing 19 		ENST00000380055 (LRRC19-001) 26993136-27005693 protein_coding
ENST00000482770 (LRRC19-002) 26995541-26997769 processed_transcript
ENSG00000234676 (IFT74-AS1)
IFT74 antisense RNA 1 		ENST00000456198 (IFT74-AS1-001) 26955780-26956295 antisense
CIL_00074I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028577-ENSMUSG00000028576 CGP 10090 4:94567514-94693229
GeneTranscriptPositionBiotype
ENSMUSG00000028576 (Ift74)
intraflagellar transport 74 		ENSMUST00000030311 (Ift74-001) 94614491-94693229 protein_coding
ENSMUST00000107104 (Ift74-002) 94614491-94664698 protein_coding
ENSMUST00000152289 (Ift74-003) 94679180-94686970 processed_transcript
ENSMUSG00000028577 (Plaa)
phospholipase A2, activating protein 		ENSMUST00000107107 (Plaa-001) 94569167-94603244 protein_coding
ENSMUST00000127656 (Plaa-005) 94571687-94583498 protein_coding
ENSMUST00000129748 (Plaa-003) 94567514-94576388 processed_transcript
ENSMUST00000135696 (Plaa-006) 94573861-94583477 processed_transcript
ENSMUST00000136669 (Plaa-002) 94585760-94603135 processed_transcript
ENSMUST00000146118 (Plaa-004) 94589687-94603181 processed_transcript
ENSMUSG00000049799 (Lrrc19)
leucine rich repeat containing 19 		ENSMUST00000053419 (Lrrc19-001) 94636653-94650144 protein_coding
ENSMUST00000107101 (Lrrc19-002) 94636653-94650116 protein_coding
ENSMUSG00000063314 (Gm12657)
predicted gene 12657 		ENSMUST00000119560 (Gm12657-001) 94599385-94599795 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00074I_0001ENSG00000096872ENST00000380062ENST00000429045ENST00000433700ENST00000443698ENST00000482986ENST00000494236ENST00000517444ENST00000517866ENST00000518614ENST00000519968ENSG00000137055ENST00000397292ENST00000487173ENST00000517642ENST00000520641ENST00000520884ENST00000521968ENST00000523212ENSG00000184434ENST00000380055ENST00000482770ENSG00000234676ENST00000456198CIL_00074I_0002ENSMUSG00000028576ENSMUST00000030311ENSMUST00000107104ENSMUST00000152289ENSMUSG00000028577ENSMUST00000107107ENSMUST00000127656ENSMUST00000129748ENSMUST00000135696ENSMUST00000136669ENSMUST00000146118ENSMUSG00000049799ENSMUST00000053419ENSMUST00000107101ENSMUSG00000063314ENSMUST00000119560
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00074I_0001ENSG00000096872ENST00000380062ENST00000429045ENST00000433700ENST00000443698ENSG00000137055ENST00000397292ENST00000517642ENST00000520884ENST00000523212ENSG00000184434ENST00000380055ENST00000482770ENSG00000234676ENST00000456198CIL_00074I_0002ENSMUSG00000028576ENSMUST00000030311ENSMUST00000107104ENSMUST00000152289ENSMUSG00000028577ENSMUST00000107107ENSMUST00000127656ENSMUST00000129748ENSMUST00000135696ENSMUST00000146118ENSMUSG00000049799ENSMUST00000053419ENSMUST00000107101ENSMUSG00000063314ENSMUST00000119560
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000096872 ENST00000380062 N/A 2.521±0.00 N/A 1.690±0.34 2.583±0.10 1.414±0.30 0.782±0.00 2.777±1.62 1.676±0.00 2.500±0.00 N/A 2.399±1.16 0.992±0.00 5.502±0.00
ENST00000429045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.600±0.00
ENST00000433700 N/A N/A N/A N/A N/A 1.878±0.00 N/A N/A 1.836±0.00 2.095±0.00 N/A 3.317±0.00 N/A 13.747±4.97
ENST00000443698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.858±1.20
ENST00000482986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000137055 ENST00000397292 2.298±0.00 2.224±0.00 0.746±0.00 2.475±0.00 2.134±0.71 1.917±0.13 2.212±0.75 3.265±0.00 1.711±0.03 1.691±0.84 6.159±0.00 3.077±1.80 3.083±0.41 3.525±0.00
ENST00000487173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517642 5.046±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520884 6.833±0.00 5.689±0.00 4.014±0.00 5.004±1.50 5.100±1.26 3.102±0.27 4.157±1.21 4.187±0.84 3.887±1.40 2.269±0.00 7.865±5.86 5.215±0.13 4.163±2.34 8.321±0.00
ENST00000521968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 42.487±0.00 34.784±0.00 71.672±0.00
ENSG00000184434 ENST00000380055 N/A N/A 1.670±0.00 0.044±0.00 0.957±0.00 8.363±0.00 0.056±0.05 3.112±2.84 0.093±0.00 N/A 0.008±0.00 0.053±0.00 0.033±0.02 N/A
ENST00000482770 N/A N/A N/A N/A N/A N/A N/A 1.634±0.00 N/A N/A N/A N/A 0.101±0.00 N/A
ENSG00000234676 ENST00000456198 0.100±0.00 0.033±0.00 N/A 0.137±0.00 N/A N/A N/A N/A N/A 0.168±0.00 N/A N/A N/A 0.927±0.82
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028576 ENSMUST00000030311 0.680±0.20 0.593±0.11 4.366±0.45 6.435±0.00 0.597±0.24 0.588±0.25 0.366±0.07 1.424±0.09 0.749±0.51 0.950±0.23 1.822±0.23 4.289±3.16 3.795±0.86 28.319±0.63
ENSMUST00000107104 0.259±0.00 1.118±0.69 N/A N/A N/A 0.584±0.00 0.125±0.00 N/A 0.364±0.12 N/A N/A 1.491±0.16 N/A N/A
ENSMUST00000152289 N/A N/A N/A N/A 0.388±0.13 0.400±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028577 ENSMUST00000107107 8.869±1.37 9.706±2.78 14.417±1.21 13.023±3.73 7.847±1.07 4.947±0.70 5.342±1.65 8.692±2.05 9.673±4.14 7.975±0.88 11.921±1.10 10.648±4.59 27.574±9.02 6.864±2.32
ENSMUST00000127656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.810±0.00 N/A
ENSMUST00000129748 N/A N/A 2.110±0.20 N/A 0.775±0.00 N/A N/A N/A 1.474±0.30 N/A 0.834±0.10 N/A 2.250±0.00 N/A
ENSMUST00000135696 N/A N/A N/A N/A 10.890±1.51 N/A 6.179±0.00 6.550±0.11 9.066±1.00 N/A N/A N/A N/A N/A
ENSMUST00000136669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146118 16.183±2.76 69.661±16.86 N/A N/A 30.107±13.46 21.495±4.80 N/A 12.929±7.32 4.750±1.27 17.271±6.48 N/A 53.010±9.44 N/A N/A
ENSMUSG00000049799 ENSMUST00000053419 N/A N/A 0.044±0.03 0.090±0.00 0.036±0.02 7.950±1.32 0.013±0.00 24.626±5.45 0.078±0.07 0.112±0.11 0.015±0.00 0.073±0.06 0.658±0.87 0.053±0.03
ENSMUST00000107101 N/A N/A N/A N/A N/A 1.512±0.02 N/A 5.951±0.00 N/A N/A N/A 0.015±0.00 0.340±0.00 0.001±0.00
ENSMUSG00000063314 ENSMUST00000119560 0.269±0.12 N/A 0.149±0.01 4.218±3.87 0.273±0.08 0.246±0.00 N/A 0.118±0.00 5.114±10.05 N/A 0.349±0.15 0.556±0.05 0.209±0.02 0.127±0.01

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