C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000750_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166676-ENSG00000179583 CGP 9606 16:10760919-10932281
GeneTranscriptPositionBiotype
ENSG00000103274 (NUBP1)
nucleotide binding protein 1 		ENST00000283027 (NUBP1-001) 10743845-10769351 protein_coding
ENST00000433392 (NUBP1-003) 10743855-10769351 protein_coding
ENST00000571175 (NUBP1-006) 10757873-10769351 protein_coding
ENST00000571790 (NUBP1-004) 10743841-10763834 processed_transcript
ENST00000573663 (NUBP1-008) 10765024-10769313 processed_transcript
ENST00000574137 (NUBP1-002) 10743844-10762112 retained_intron
ENST00000574334 (NUBP1-005) 10743786-10757994 protein_coding
ENST00000574691 (NUBP1-007) 10758011-10769351 protein_coding
ENSG00000179583 (CIITA)
class II, major histocompatibility complex, transactivator 		ENST00000324288 (CIITA-001) 10877198-10932281 protein_coding
ENST00000381835 (CIITA-002) 10877210-10924437 protein_coding
ENST00000537380 (CIITA-005) 10877331-10910243 processed_transcript
ENST00000570546 (CIITA-003) 10877210-10924804 retained_intron
ENST00000571186 (CIITA-006) 10877223-10902722 nonsense_mediated_decay
ENST00000571190 (CIITA-007) 10901559-10902037 retained_intron
ENST00000571545 (CIITA-012) 10928164-10932222 processed_transcript
ENST00000572665 (CIITA-009) 10915646-10917010 processed_transcript
ENST00000573309 (CIITA-004) 10877216-10908887 retained_intron
ENST00000575513 (CIITA-010) 10922925-10923992 retained_intron
ENST00000576601 (CIITA-008) 10878969-10902160 protein_coding
ENST00000611587 (CIITA-201) 10877216-10908887 protein_coding
ENST00000618207 (CIITA-202) 10877198-10924983 protein_coding
ENST00000618327 (CIITA-203) 10877198-10924983 protein_coding
ENSG00000182108 (DEXI)
Dexi homolog (mouse) 		ENST00000331808 (DEXI-001) 10928891-10942460 protein_coding
ENST00000469379 (DEXI-002) 10928891-10942131 protein_coding
ENST00000570992 (DEXI-003) 10928942-10941718 processed_transcript
ENSG00000262488 (RP11-876N24.1)
 ENST00000577174 (RP11-876N24.1-001) 10840384-10841544 processed_pseudogene
CIL_000750_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050908-ENSMUSG00000022504 CGP 10090 16:10420557-10527564
GeneTranscriptPositionBiotype
ENSMUSG00000022503 (Nubp1)
nucleotide binding protein 1 		ENSMUST00000023146 (Nubp1-001) 10411948-10424428 protein_coding
ENSMUST00000129280 (Nubp1-003) 10411954-10420551 retained_intron
ENSMUST00000140157 (Nubp1-005) 10411949-10421672 processed_transcript
ENSMUST00000142771 (Nubp1-002) 10411970-10424428 retained_intron
ENSMUST00000143617 (Nubp1-004) 10421236-10423346 processed_transcript
ENSMUST00000156338 (Nubp1-006) 10412064-10421437 retained_intron
ENSMUSG00000022504 (Ciita)
class II transactivator 		ENSMUST00000023147 (Ciita-201) 10488178-10527564 protein_coding
ENSMUSG00000038055 (Dexi)
dexamethasone-induced transcript 		ENSMUST00000038281 (Dexi-001) 10530207-10543054 protein_coding
ENSMUST00000183355 (Dexi-003) 10530207-10531809 processed_transcript
ENSMUST00000184863 (Dexi-002) 10502531-10543054 protein_coding
ENSMUSG00000050908 (Tvp23a)
trans-golgi network vesicle protein 23A 		ENSMUST00000051118 (Tvp23a-001) 10420557-10447362 protein_coding
ENSMUST00000128288 (Tvp23a-003) 10423244-10447144 nonsense_mediated_decay
ENSMUST00000135315 (Tvp23a-005) 10425863-10429185 processed_transcript
ENSMUST00000141587 (Tvp23a-004) 10427039-10429261 processed_transcript
ENSMUST00000153027 (Tvp23a-002) 10424211-10447327 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000750_0001ENSG00000103274ENST00000283027ENST00000433392ENST00000571175ENST00000571790ENST00000573663ENST00000574137ENST00000574334ENST00000574691ENSG00000179583ENST00000324288ENST00000381835ENST00000537380ENST00000570546ENST00000571186ENST00000571190ENST00000571545ENST00000572665ENST00000573309ENST00000575513ENST00000576601ENST00000611587ENST00000618207ENST00000618327ENSG00000182108ENST00000331808ENST00000469379ENST00000570992ENSG00000262488ENST00000577174CIL_000750_0002ENSMUSG00000022503ENSMUST00000023146ENSMUST00000129280ENSMUST00000140157ENSMUST00000142771ENSMUST00000143617ENSMUST00000156338ENSMUSG00000022504ENSMUST00000023147ENSMUSG00000038055ENSMUST00000038281ENSMUST00000183355ENSMUST00000184863ENSMUSG00000050908ENSMUST00000051118ENSMUST00000128288ENSMUST00000135315ENSMUST00000141587ENSMUST00000153027
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000750_0001ENSG00000103274ENST00000283027ENST00000571790ENST00000574137ENST00000574334ENSG00000179583ENST00000324288ENST00000537380ENST00000570546ENST00000611587ENST00000618207ENST00000618327ENSG00000182108ENST00000331808ENST00000469379ENST00000570992ENSG00000262488ENST00000577174CIL_000750_0002ENSMUSG00000022503ENSMUST00000023146ENSMUST00000129280ENSMUST00000142771ENSMUSG00000022504ENSMUST00000023147ENSMUSG00000038055ENSMUST00000038281ENSMUST00000183355ENSMUSG00000050908ENSMUST00000051118
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103274 ENST00000283027 3.585±0.00 9.633±0.00 0.293±0.00 1.144±0.00 3.728±0.20 4.306±1.77 4.046±2.90 2.400±0.00 2.490±1.78 2.920±0.81 4.360±0.76 5.999±4.35 14.197±4.61 5.315±0.35
ENST00000433392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571790 N/A N/A 0.694±0.00 N/A N/A N/A N/A N/A 1.692±0.00 N/A N/A 5.197±3.67 N/A N/A
ENST00000573663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574137 2.904±0.00 N/A N/A N/A N/A N/A 6.966±0.00 N/A N/A 5.507±0.00 N/A N/A N/A 6.943±0.00
ENST00000574334 7.033±0.00 23.231±0.00 N/A 6.044±0.00 8.128±0.00 7.743±0.00 2.422±0.00 4.656±0.00 2.328±0.00 N/A 6.185±0.00 11.834±0.00 29.990±0.00 13.758±2.61
ENST00000574691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000179583 ENST00000324288 N/A 6.318±0.00 N/A 0.463±0.00 N/A 0.496±0.19 0.505±0.00 N/A N/A N/A 0.234±0.00 0.948±0.29 N/A N/A
ENST00000381835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537380 N/A N/A 4.448±0.00 N/A 4.924±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570546 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.269±0.00 N/A N/A N/A N/A
ENST00000571186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611587 N/A N/A N/A N/A 1.522±0.00 N/A 0.670±0.00 N/A N/A 2.042±0.00 N/A N/A N/A N/A
ENST00000618207 N/A N/A N/A N/A N/A N/A N/A N/A 1.547±0.00 N/A N/A N/A N/A N/A
ENST00000618327 N/A N/A N/A N/A N/A N/A N/A 0.652±0.00 N/A 4.701±0.00 N/A 0.768±0.00 1.147±0.00 N/A
ENSG00000182108 ENST00000331808 9.154±0.00 38.031±0.00 N/A 7.324±4.11 15.533±0.00 11.567±0.00 12.500±10.52 9.722±6.73 42.012±0.00 19.802±0.00 13.211±7.48 12.682±11.44 9.166±4.11 8.293±5.35
ENST00000469379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.986±0.00 2.839±0.00
ENST00000570992 9.647±0.00 N/A 9.221±0.00 3.157±0.00 N/A 14.437±0.00 19.135±0.00 12.812±2.69 N/A N/A 20.047±0.99 9.974±4.26 13.293±0.59 7.378±3.09
ENSG00000262488 ENST00000577174 0.026±0.00 4.698±0.00 N/A 0.105±0.00 0.014±0.00 N/A N/A N/A 0.063±0.00 0.095±0.00 N/A 0.047±0.03 0.045±0.00 0.211±0.17
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022503 ENSMUST00000023146 6.819±2.00 4.079±1.21 6.773±2.53 10.650±0.82 4.898±1.23 7.662±1.77 1.902±0.61 5.365±0.50 8.450±3.78 5.138±1.62 1.815±0.31 6.499±2.19 9.062±3.68 4.481±1.49
ENSMUST00000129280 N/A 4.388±0.78 N/A N/A N/A 6.985±0.00 N/A N/A 4.822±0.71 N/A N/A 7.348±0.00 9.688±0.00 4.165±0.82
ENSMUST00000140157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142771 1.874±0.00 1.052±0.12 1.530±0.00 N/A 1.305±0.12 1.241±0.00 0.595±0.00 N/A N/A 1.684±0.00 0.490±0.00 1.253±0.00 N/A N/A
ENSMUST00000143617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022504 ENSMUST00000023147 2.954±0.00 N/A 1.462±0.20 N/A 13.902±7.62 2.775±0.17 N/A 1.260±0.36 N/A 4.221±1.34 1.474±0.00 1.861±0.38 0.241±0.00 N/A
ENSMUSG00000038055 ENSMUST00000038281 16.969±2.87 25.385±5.07 17.505±0.68 17.188±1.23 23.967±8.19 21.564±1.90 24.254±4.26 15.318±1.11 15.443±11.51 20.134±1.15 23.632±2.09 30.359±8.67 3.914±1.43 5.224±2.30
ENSMUST00000183355 N/A N/A N/A 12.830±0.00 N/A N/A N/A N/A N/A N/A N/A 8.023±0.00 1.899±0.31 0.948±0.00
ENSMUST00000184863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000050908 ENSMUST00000051118 3.663±1.84 N/A 2.586±1.19 10.898±6.54 N/A 1.992±0.00 0.820±0.02 1.501±0.16 2.009±0.76 2.183±0.00 0.405±0.04 N/A 1.804±0.02 0.677±0.03
ENSMUST00000128288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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