C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00079S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109689-ENSG00000169851 CGP 9606 4:26857678-31146805
GeneTranscriptPositionBiotype
ENSG00000109689 (STIM2)
stromal interaction molecule 2 		ENST00000463501 (STIM2-007) 26857928-27002394 protein_coding
ENST00000465503 (STIM2-002) 26860841-27023966 protein_coding
ENST00000467011 (STIM2-003) 26860794-27024187 protein_coding
ENST00000467087 (STIM2-001) 26860691-27025381 protein_coding
ENST00000473519 (STIM2-004) 27003000-27022840 protein_coding
ENST00000477474 (STIM2-005) 27008473-27019600 protein_coding
ENST00000478049 (STIM2-006) 26861459-26995402 protein_coding
ENST00000478425 (STIM2-009) 26858248-26858919 processed_transcript
ENST00000494628 (STIM2-008) 26857678-27002228 protein_coding
ENST00000504511 (STIM2-010) 27021282-27022661 retained_intron
ENSG00000169851 (PCDH7)
protocadherin 7 		ENST00000361762 (PCDH7-001) 30720415-30732973 protein_coding
ENST00000507864 (PCDH7-002) 30723050-30724596 processed_transcript
ENST00000509759 (PCDH7-005) 30724527-31142954 protein_coding
ENST00000509925 (PCDH7-004) 30920153-30987807 processed_transcript
ENST00000511884 (PCDH7-003) 30722354-31146805 protein_coding
ENST00000543491 (PCDH7-007) 30720853-30725309 protein_coding
ENST00000610830 (PCDH7-009) 30925713-30950215 processed_transcript
ENST00000621961 (PCDH7-008) 30723480-31143125 protein_coding
ENSG00000240005 (RP11-293A21.1)
 ENST00000467484 (RP11-293A21.1-001) 26859806-26860599 antisense
ENST00000472346 (RP11-293A21.1-003) 26859809-26860244 antisense
ENST00000489096 (RP11-293A21.1-002) 26859806-26860581 antisense
ENSG00000243548 (RN7SL101P)
RNA, 7SL, cytoplasmic 101, pseudogene 		ENST00000496350 (RN7SL101P-201) 28711198-28711476 misc_RNA
ENSG00000248176 (RP11-472K22.1)
 ENST00000503299 (RP11-472K22.1-001) 29118308-29202770 lincRNA
ENSG00000248338 (RP11-472K22.2)
 ENST00000512268 (RP11-472K22.2-001) 29214398-29221162 lincRNA
ENSG00000248340 (RP11-293A21.2)
 ENST00000511723 (RP11-293A21.2-001) 26873561-26874349 processed_pseudogene
ENSG00000249228 (RP11-769N22.1)
 ENST00000514855 (RP11-769N22.1-001) 29046591-29048765 lincRNA
ENSG00000249542 (EEF1A1P21)
eukaryotic translation elongation factor 1 alpha 1 pseudogene 21 		ENST00000512363 (EEF1A1P21-001) 29748757-29750100 processed_pseudogene
ENSG00000249678 (RP11-619J20.1)
 ENST00000509136 (RP11-619J20.1-001) 30776257-30793970 antisense
ENSG00000249699 (RP11-415C15.2)
 ENST00000512873 (RP11-415C15.2-001) 27217479-27282225 lincRNA
ENSG00000250038 (RP11-180C1.1)
 ENST00000507759 (RP11-180C1.1-001) 28362279-28402701 lincRNA
ENST00000515720 (RP11-180C1.1-002) 28381497-28402864 lincRNA
ENSG00000250064 (RP11-123O22.1)
 ENST00000509416 (RP11-123O22.1-001) 28435449-28600275 lincRNA
ENSG00000250190 (RP11-292B1.2)
 ENST00000514802 (RP11-292B1.2-001) 28996524-29014594 lincRNA
ENSG00000250624 (RP11-93M12.1)
 ENST00000513621 (RP11-93M12.1-001) 30884443-30885182 unprocessed_pseudogene
ENSG00000250858 (IGBP1P5)
immunoglobulin (CD79A) binding protein 1 pseudogene 5 		ENST00000507524 (IGBP1P5-001) 27585145-27586144 processed_pseudogene
ENSG00000250927 (MESTP3)
mesoderm specific transcript pseudogene 3 		ENST00000503460 (MESTP3-001) 28823244-28824211 processed_pseudogene
ENSG00000251080 (RP11-415C15.1)
 ENST00000506878 (RP11-415C15.1-001) 27133996-27140051 lincRNA
ENSG00000251113 (RP11-68D16.2)
 ENST00000515413 (RP11-68D16.2-001) 29465701-29467850 processed_pseudogene
ENSG00000251325 (RP11-415C15.3)
 ENST00000513616 (RP11-415C15.3-001) 27262506-27267254 lincRNA
ENSG00000251410 (AC007106.1)
 ENST00000509666 (AC007106.1-001) 27967723-27985063 lincRNA
CIL_00079S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039156-ENSMUSG00000029108 CGP 10090 5:53998417-58129351
GeneTranscriptPositionBiotype
ENSMUSG00000029108 (Pcdh7)
protocadherin 7 		ENSMUST00000068110 (Pcdh7-201) 57718021-57729465 protein_coding
ENSMUST00000094783 (Pcdh7-202) 57718021-58129351 protein_coding
ENSMUSG00000039156 (Stim2)
stromal interaction molecule 2 		ENSMUST00000071083 (Stim2-004) 53998565-54119592 protein_coding
ENSMUST00000117661 (Stim2-001) 53998417-54121057 protein_coding
ENSMUST00000129109 (Stim2-005) 54115857-54118587 retained_intron
ENSMUST00000152812 (Stim2-002) 54105368-54119933 protein_coding
ENSMUST00000155608 (Stim2-003) 54074737-54104489 processed_transcript
ENSMUSG00000051116 (Gm8121)
predicted pseudogene 8121 		ENSMUST00000153583 (Gm8121-001) 57608567-57609067 processed_pseudogene
ENSMUSG00000081266 (Gm15820)
predicted gene 15820 		ENSMUST00000121316 (Gm15820-001) 54094001-54095041 processed_pseudogene
ENSMUSG00000083902 (Gm15975)
predicted gene 15975 		ENSMUST00000122385 (Gm15975-001) 55624188-55625593 processed_pseudogene
ENSMUSG00000097216 (4932441J04Rik)
RIKEN cDNA 4932441J04 gene 		ENSMUST00000180708 (4932441J04Rik-201) 57570082-57717919 lincRNA
ENSMUSG00000099710 (RP24-394H13.1)
predicted gene 28708 		ENSMUST00000185611 (RP24-394H13.1-001) 56341246-56346942 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109689 ENST00000463501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.477±0.00 2.393±0.00 N/A N/A
ENST00000465503 3.611±0.00 7.117±0.00 0.489±0.00 3.779±1.57 2.850±0.12 2.493±0.00 1.222±0.00 1.546±0.57 1.484±0.28 3.820±0.66 0.824±0.00 3.383±1.80 2.084±0.87 2.230±0.00
ENST00000467011 N/A N/A N/A 0.985±0.00 0.882±0.00 0.513±0.00 0.276±0.00 1.260±0.00 0.695±0.00 1.317±0.00 0.359±0.14 2.503±1.20 2.084±1.64 3.204±0.77
ENST00000467087 0.875±0.00 N/A 0.300±0.00 1.016±0.00 0.910±0.00 N/A N/A N/A 0.395±0.14 N/A N/A 2.609±1.36 N/A 0.704±0.00
ENST00000473519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.881±0.00 N/A N/A N/A
ENST00000477474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.568±0.00 N/A N/A N/A
ENST00000478049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169851 ENST00000361762 N/A 0.714±0.00 N/A N/A 0.640±0.42 1.082±0.00 N/A 0.194±0.05 0.031±0.00 N/A N/A 0.467±0.00 N/A N/A
ENST00000507864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.289±0.00 N/A N/A N/A
ENST00000511884 0.061±0.00 2.285±0.00 0.254±0.00 7.683±1.42 1.642±1.07 4.774±2.42 2.357±0.03 0.624±0.46 1.504±1.38 1.283±0.47 0.070±0.01 0.986±0.05 0.011±0.00 0.845±0.70
ENST00000543491 N/A N/A 0.345±0.00 N/A N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A 0.104±0.00 N/A
ENST00000610830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621961 N/A N/A N/A N/A N/A N/A N/A N/A 0.109±0.00 N/A 0.066±0.00 N/A N/A N/A
ENSG00000240005 ENST00000467484 N/A N/A N/A N/A 0.569±0.00 0.038±0.00 N/A N/A 0.078±0.00 0.368±0.00 N/A 0.230±0.15 N/A 5.478±0.05
ENST00000472346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489096 0.240±0.00 N/A N/A 0.526±0.00 0.903±0.00 N/A 0.332±0.00 N/A 0.636±0.00 N/A N/A 1.077±0.73 0.258±0.00 8.832±4.79
ENSG00000243548 ENST00000496350 N/A N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A N/A N/A 0.189±0.00 0.148±0.00 0.125±0.02
ENSG00000248176 ENST00000503299 N/A N/A N/A 0.015±0.00 N/A 0.013±0.00 N/A N/A N/A N/A 0.039±0.00 0.044±0.00 N/A 1.112±0.00
ENSG00000248338 ENST00000512268 N/A 0.057±0.00 N/A 0.289±0.00 0.302±0.00 N/A 0.070±0.00 N/A N/A 0.157±0.00 N/A N/A N/A 0.158±0.06
ENSG00000248340 ENST00000511723 N/A 0.291±0.00 0.080±0.00 0.038±0.00 0.216±0.00 N/A N/A 0.068±0.00 0.528±0.00 N/A N/A 0.099±0.05 N/A N/A
ENSG00000249228 ENST00000514855 0.199±0.00 0.965±0.00 N/A 0.523±0.46 0.362±0.22 0.145±0.04 0.286±0.00 0.693±0.00 0.104±0.06 0.248±0.23 0.184±0.00 0.219±0.14 0.124±0.12 1.805±0.81
ENSG00000249542 ENST00000512363 N/A 0.008±0.00 N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A 0.008±0.00
ENSG00000249678 ENST00000509136 N/A N/A N/A N/A N/A N/A 0.203±0.00 N/A N/A N/A N/A N/A N/A 0.326±0.00
ENSG00000249699 ENST00000512873 0.098±0.00 0.131±0.00 N/A 0.070±0.06 0.111±0.00 0.083±0.06 0.110±0.00 0.075±0.00 0.036±0.02 0.024±0.00 0.022±0.02 0.027±0.01 0.033±0.01 0.084±0.06
ENSG00000250038 ENST00000507759 N/A 0.038±0.00 N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A 0.023±0.00 N/A 1.398±0.15
ENST00000515720 0.031±0.00 N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A 0.398±0.00
ENSG00000250064 ENST00000509416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.207±0.16 N/A 0.569±0.00
ENSG00000250190 ENST00000514802 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.587±0.13
ENSG00000250624 ENST00000513621 N/A N/A N/A 1.900±0.00 N/A 0.449±0.00 N/A N/A N/A N/A N/A N/A N/A 0.396±0.00
ENSG00000250858 ENST00000507524 0.026±0.00 N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A 0.024±0.00 0.055±0.00 N/A 0.064±0.03
ENSG00000250927 ENST00000503460 N/A N/A N/A N/A N/A 0.396±0.00 N/A N/A N/A N/A N/A 0.042±0.00 N/A 0.055±0.01
ENSG00000251080 ENST00000506878 N/A 0.307±0.00 N/A 0.063±0.00 0.031±0.00 0.115±0.00 0.110±0.00 N/A N/A N/A N/A 0.102±0.00 N/A 0.190±0.00
ENSG00000251113 ENST00000515413 N/A N/A N/A N/A N/A N/A 0.104±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000251325 ENST00000513616 0.053±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251410 ENST00000509666 N/A N/A N/A 0.206±0.00 N/A N/A N/A N/A N/A N/A N/A 0.034±0.00 N/A 0.077±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029108 ENSMUST00000068110 5.277±2.18 0.618±0.22 5.709±0.12 N/A 3.602±0.60 1.837±0.44 3.951±0.29 1.607±0.18 0.199±0.10 1.485±0.41 0.197±0.07 5.293±1.58 0.709±0.68 0.137±0.09
ENSMUST00000094783 5.433±4.11 0.597±0.20 6.103±0.81 5.513±2.55 1.066±0.47 2.340±0.95 6.359±0.79 0.675±0.37 0.110±0.05 1.035±0.34 0.080±0.02 4.429±1.72 0.464±0.22 0.286±0.07
ENSMUSG00000039156 ENSMUST00000071083 8.309±0.11 9.685±1.75 2.206±0.30 9.850±8.84 11.606±3.06 14.942±1.77 3.217±0.22 4.840±1.45 2.457±1.06 17.274±5.02 7.997±1.36 11.120±2.43 3.084±1.97 2.378±0.19
ENSMUST00000117661 N/A N/A 0.458±0.04 1.669±1.49 N/A N/A 0.490±0.00 N/A 0.267±0.06 N/A N/A 1.873±0.00 0.284±0.14 0.283±0.00
ENSMUST00000129109 N/A 10.038±1.83 N/A N/A N/A 16.537±0.00 N/A N/A 3.200±0.40 N/A N/A N/A N/A N/A
ENSMUST00000152812 N/A 2.372±0.00 1.363±0.29 2.034±0.03 N/A 6.265±1.06 N/A 1.927±0.90 1.147±0.44 3.010±0.00 3.364±0.29 4.726±0.13 1.666±0.65 0.685±0.12
ENSMUST00000155608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000051116 ENSMUST00000153583 0.502±0.33 0.556±0.00 1.109±0.00 0.720±0.31 0.720±0.22 1.055±0.37 0.498±0.27 0.430±0.22 0.655±0.34 0.236±0.04 0.422±0.11 1.347±0.34 0.104±0.00 0.728±0.20
ENSMUSG00000081266 ENSMUST00000121316 0.159±0.00 N/A 0.036±0.02 N/A 0.196±0.05 0.245±0.21 0.051±0.00 0.092±0.02 0.082±0.05 0.269±0.11 0.072±0.02 0.253±0.02 0.028±0.01 0.071±0.03
ENSMUSG00000083902 ENSMUST00000122385 0.314±0.13 0.179±0.09 0.101±0.02 0.290±0.05 0.515±0.13 0.269±0.21 0.326±0.28 0.132±0.04 0.404±0.22 0.747±0.07 0.042±0.01 0.342±0.12 1.032±0.75 0.175±0.07
ENSMUSG00000097216 ENSMUST00000180708 N/A N/A 0.150±0.04 0.066±0.00 0.422±0.34 N/A N/A 0.074±0.00 N/A N/A 0.060±0.00 0.497±0.33 0.083±0.02 0.183±0.11
ENSMUSG00000099710 ENSMUST00000185611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.387±0.00

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