C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00079X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101935-ENSG00000243978 CGP 9606 X:110194186-110456334
GeneTranscriptPositionBiotype
ENSG00000101935 (AMMECR1)
Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 		ENST00000262844 (AMMECR1-001) 110194186-110318239 protein_coding
ENST00000372057 (AMMECR1-002) 110196410-110440233 protein_coding
ENST00000372059 (AMMECR1-005) 110196372-110318084 protein_coding
ENST00000473662 (AMMECR1-003) 110219480-110317771 processed_transcript
ENST00000496695 (AMMECR1-004) 110309150-110317756 processed_transcript
ENSG00000133136 (GNG5P2)
guanine nucleotide binding protein (G protein), gamma 5 pseudogene 2 		ENST00000372054 (GNG5P2-001) 110346703-110346909 processed_pseudogene
ENSG00000224142 (AMMECR1-IT1)
AMMECR1 intronic transcript 1 (non-protein coding) 		ENST00000418848 (AMMECR1-IT1-001) 110305420-110307221 sense_intronic
ENSG00000243978 (RGAG1)
retrotransposon gag domain containing 1 		ENST00000465301 (RGAG1-001) 110419057-110456334 protein_coding
ENST00000520821 (RGAG1-003) 110358816-110450881 protein_coding
ENST00000540313 (RGAG1-201) 110450565-110456326 protein_coding
CIL_00079X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042225-ENSMUSG00000085584 CGP 10090 X:142851146-143104297
GeneTranscriptPositionBiotype
ENSMUSG00000042225 (Ammecr1)
Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 		ENSMUST00000041317 (Ammecr1-001) 142851146-142966728 protein_coding
ENSMUSG00000085584 (Rgag1)
retrotransposon gag domain containing 1 		ENSMUST00000165829 (Rgag1-001) 143099594-143104297 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079X_0001ENSG00000101935ENST00000262844ENST00000372057ENST00000372059ENST00000473662ENST00000496695ENSG00000133136ENST00000372054ENSG00000224142ENST00000418848ENSG00000243978ENST00000465301ENST00000520821ENST00000540313CIL_00079X_0002ENSMUSG00000042225ENSMUST00000041317ENSMUSG00000085584ENSMUST00000165829
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079X_0001ENSG00000101935ENST00000262844ENST00000372059ENSG00000133136ENST00000372054ENSG00000224142ENST00000418848ENSG00000243978ENST00000465301ENST00000540313CIL_00079X_0002ENSMUSG00000042225ENSMUST00000041317ENSMUSG00000085584ENSMUST00000165829
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101935 ENST00000262844 0.646±0.00 0.823±0.00 0.459±0.00 0.125±0.00 0.638±0.53 0.368±0.00 0.276±0.14 0.638±0.13 0.331±0.06 0.869±0.62 N/A 1.737±0.42 2.475±0.64 0.418±0.00
ENST00000372057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372059 N/A N/A 0.368±0.00 N/A 0.471±0.00 0.676±0.00 0.203±0.00 1.168±0.00 N/A N/A 0.557±0.00 N/A N/A N/A
ENST00000473662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000133136 ENST00000372054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.00 N/A N/A 0.187±0.00
ENSG00000224142 ENST00000418848 0.092±0.00 0.170±0.00 N/A 0.046±0.00 0.154±0.01 0.095±0.00 0.109±0.07 0.104±0.00 0.037±0.00 0.085±0.00 N/A 0.073±0.03 0.107±0.00 0.198±0.09
ENSG00000243978 ENST00000465301 N/A N/A N/A N/A N/A N/A 0.149±0.00 N/A N/A N/A N/A 0.604±0.00 N/A N/A
ENST00000520821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540313 0.020±0.00 N/A N/A 0.157±0.05 0.033±0.00 0.013±0.01 0.094±0.00 0.009±0.00 0.060±0.00 N/A 0.026±0.00 0.197±0.12 0.281±0.01 2.177±0.42
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042225 ENSMUST00000041317 1.214±0.48 1.018±0.10 1.124±0.10 0.790±0.33 0.532±0.19 1.000±0.25 1.019±0.21 0.216±0.08 1.809±2.16 0.579±0.22 0.574±0.22 1.890±1.02 2.832±0.76 0.403±0.05
ENSMUSG00000085584 ENSMUST00000165829 0.224±0.06 0.088±0.04 N/A 0.233±0.00 0.115±0.05 0.061±0.04 0.058±0.03 0.017±0.01 0.009±0.00 0.134±0.04 0.041±0.01 0.156±0.08 0.053±0.02 0.016±0.00

Loading