C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007A4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000072315-ENSG00000187823 CGP 9606 X:111774315-112457112
GeneTranscriptPositionBiotype
ENSG00000072315 (TRPC5)
transient receptor potential cation channel, subfamily C, member 5 		ENST00000262839 (TRPC5-001) 111774315-112082776 protein_coding
ENSG00000187823 (ZCCHC16)
zinc finger, CCHC domain containing 16 		ENST00000340433 (ZCCHC16-001) 112454500-112457112 protein_coding
ENSG00000204025 (TRPC5OS)
TRPC5 opposite strand 		ENST00000371970 (TRPC5OS-001) 111881897-111903990 antisense
ENST00000612026 (TRPC5OS-201) 111876051-111903983 antisense
ENSG00000271400 (RP13-266I11.1)
 ENST00000605115 (RP13-266I11.1-001) 112381392-112382220 processed_pseudogene
CIL_0007A4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041710-ENSMUSG00000071679 CGP 10090 X:144381671-145122411
GeneTranscriptPositionBiotype
ENSMUSG00000041710 (Trpc5)
transient receptor potential cation channel, subfamily C, member 5 		ENSMUST00000040184 (Trpc5-001) 144381671-144688180 protein_coding
ENSMUST00000148240 (Trpc5-002) 144418675-144688003 retained_intron
ENSMUSG00000071679 (Zcchc16)
zinc finger, CCHC domain containing 16 		ENSMUST00000096301 (Zcchc16-201) 145119501-145121258 protein_coding
ENSMUST00000112843 (Zcchc16-001) 144688907-145122411 protein_coding
ENSMUSG00000072934 (Trpc5os)
transient receptor potential cation channel, subfamily C, member 5, opposite strand 		ENSMUST00000155206 (Trpc5os-001) 144456581-144477066 antisense
ENSMUST00000178233 (Trpc5os-201) 144470681-144477063 antisense
ENSMUSG00000081635 (Gm15071)
predicted gene 15071 		ENSMUST00000118189 (Gm15071-001) 144499327-144500692 processed_pseudogene
ENSMUSG00000082106 (Mageb16-ps1)
melanoma antigen family B, 16, pseudogene 1 		ENSMUST00000117991 (Mageb16-ps1-001) 144555211-144556337 processed_pseudogene
ENSMUSG00000084303 (Gm8216)
predicted gene 8216 		ENSMUST00000117232 (Gm8216-001) 144847683-144848283 processed_pseudogene
ENSMUSG00000089282 (Gm26024)
predicted gene, 26024 		ENSMUST00000158657 (Gm26024-201) 144820187-144820508 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007A4_0001ENSG00000072315ENST00000262839ENSG00000187823ENST00000340433ENSG00000204025ENST00000371970ENST00000612026ENSG00000271400ENST00000605115CIL_0007A4_0002ENSMUSG00000041710ENSMUST00000040184ENSMUST00000148240ENSMUSG00000071679ENSMUST00000096301ENSMUST00000112843ENSMUSG00000072934ENSMUST00000155206ENSMUST00000178233ENSMUSG00000081635ENSMUST00000118189ENSMUSG00000082106ENSMUST00000117991ENSMUSG00000084303ENSMUST00000117232ENSMUSG00000089282ENSMUST00000158657
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007A4_0001ENSG00000072315ENST00000262839ENSG00000187823ENST00000340433ENSG00000204025ENST00000371970ENST00000612026ENSG00000271400ENST00000605115CIL_0007A4_0002ENSMUSG00000041710ENSMUST00000040184ENSMUST00000148240ENSMUSG00000071679ENSMUST00000096301ENSMUST00000112843ENSMUSG00000072934ENSMUST00000155206ENSMUST00000178233ENSMUSG00000081635ENSMUST00000118189ENSMUSG00000082106ENSMUST00000117991ENSMUSG00000084303ENSMUST00000117232ENSMUSG00000089282ENSMUST00000158657
Gene Transcript Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000072315 ENST00000262839 0.004±0.00 0.004±0.00 N/A 1.241±0.72 0.026±0.02 0.007±0.00 0.306±0.30 0.216±0.00 0.113±0.00 N/A 0.089±0.09 0.009±0.00 0.012±0.00
ENSG00000187823 ENST00000340433 N/A N/A 0.186±0.00 0.046±0.00 N/A N/A 0.093±0.08 0.215±0.00 N/A N/A N/A N/A 0.027±0.01
ENSG00000204025 ENST00000371970 N/A N/A 0.018±0.00 0.187±0.00 0.002±0.00 N/A 0.095±0.00 N/A N/A N/A N/A N/A 11.239±6.80
ENST00000612026 N/A N/A N/A N/A 0.002±0.00 N/A N/A N/A N/A N/A N/A N/A 0.690±0.00
ENSG00000271400 ENST00000605115 N/A N/A N/A N/A N/A N/A 0.239±0.00 N/A N/A N/A N/A N/A 0.253±0.10
Gene Transcript Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041710 ENSMUST00000040184 0.018±0.01 0.147±0.06 0.003±0.00 1.488±0.00 N/A 0.006±0.00 0.053±0.03 0.025±0.01 N/A N/A 0.124±0.04 0.015±0.01 0.030±0.02
ENSMUST00000148240 N/A 0.031±0.00 N/A N/A N/A N/A 0.045±0.01 N/A N/A N/A 0.191±0.10 0.014±0.00 0.005±0.00
ENSMUSG00000071679 ENSMUST00000096301 0.020±0.00 0.360±0.15 N/A N/A N/A N/A N/A N/A N/A N/A 0.423±0.26 0.020±0.00 0.083±0.00
ENSMUST00000112843 0.013±0.00 0.220±0.00 0.038±0.01 0.117±0.06 N/A 0.008±0.00 0.095±0.02 0.050±0.02 N/A 0.039±0.02 0.210±0.11 0.017±0.01 0.346±0.01
ENSMUSG00000072934 ENSMUST00000155206 N/A N/A N/A N/A N/A N/A N/A 0.023±0.01 N/A N/A 0.014±0.00 1.025±0.70 0.919±0.07
ENSMUST00000178233 N/A N/A 0.025±0.01 0.014±0.00 N/A N/A N/A 0.018±0.01 0.043±0.00 N/A N/A 1.235±0.48 2.016±0.00
ENSMUSG00000081635 ENSMUST00000118189 N/A N/A N/A 0.010±0.00 N/A N/A N/A 0.006±0.00 N/A N/A N/A 0.008±0.00 0.037±0.00
ENSMUSG00000082106 ENSMUST00000117991 N/A N/A N/A 0.015±0.01 N/A N/A N/A 0.008±0.00 N/A N/A N/A 0.005±0.00 0.062±0.00
ENSMUSG00000084303 ENSMUST00000117232 N/A N/A 0.016±0.00 0.036±0.01 N/A N/A N/A 0.056±0.02 N/A N/A 0.076±0.00 0.060±0.02 0.066±0.00
ENSMUSG00000089282 ENSMUST00000158657 N/A N/A N/A 0.048±0.00 N/A N/A N/A 0.060±0.01 N/A N/A N/A N/A N/A

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