C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007AW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000039347-ENSDARG00000074502 CGP 7955 13:30448864-30794461
GeneTranscriptPositionBiotype
ENSDARG00000039347 (rps24)
ribosomal protein S24 		ENSDART00000100813 (rps24-002) 30451679-30457995 protein_coding
ENSDART00000133404 (rps24-005) 30451720-30457999 protein_coding
ENSDART00000134691 (rps24-004) 30451723-30453952 retained_intron
ENSDART00000141945 (rps24-006) 30448864-30457997 protein_coding
ENSDART00000143934 (rps24-003) 30451703-30457282 retained_intron
ENSDART00000147729 (rps24-001) 30451685-30458822 protein_coding
ENSDARG00000074502 (zmiz1a)
zinc finger, MIZ-type containing 1a 		ENSDART00000110884 (zmiz1a-001) 30730383-30794461 protein_coding
ENSDART00000113617 (zmiz1a-201) 30721910-30794459 protein_coding
ENSDART00000143569 (zmiz1a-002) 30645074-30776194 protein_coding
CIL_0007AW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138326-ENSG00000108175 CGP 9606 10:78033760-79316528
GeneTranscriptPositionBiotype
ENSG00000108175 (ZMIZ1)
zinc finger, MIZ-type containing 1 		ENST00000334512 (ZMIZ1-001) 79069035-79316519 protein_coding
ENST00000446377 (ZMIZ1-201) 79285453-79316528 protein_coding
ENST00000472035 (ZMIZ1-002) 79243669-79291085 processed_transcript
ENST00000478357 (ZMIZ1-003) 79277179-79296935 processed_transcript
ENST00000611351 (ZMIZ1-202) 79201595-79315753 protein_coding
ENSG00000138326 (RPS24)
ribosomal protein S24 		ENST00000360830 (RPS24-003) 78033883-78040697 protein_coding
ENST00000372360 (RPS24-001) 78033865-78040697 protein_coding
ENST00000435275 (RPS24-201) 78033760-78040713 protein_coding
ENST00000440692 (RPS24-202) 78033760-78056812 protein_coding
ENST00000464716 (RPS24-007) 78033874-78037472 processed_transcript
ENST00000465692 (RPS24-008) 78035352-78054676 processed_transcript
ENST00000466129 (RPS24-005) 78033886-78036086 retained_intron
ENST00000475468 (RPS24-004) 78033904-78035654 processed_transcript
ENST00000476545 (RPS24-009) 78033878-78054931 processed_transcript
ENST00000478655 (RPS24-006) 78033863-78037602 retained_intron
ENST00000480662 (RPS24-012) 78039598-78040697 retained_intron
ENST00000482069 (RPS24-010) 78033917-78040696 processed_transcript
ENST00000485708 (RPS24-002) 78033844-78040670 processed_transcript
ENST00000613865 (RPS24-203) 78033760-78037335 protein_coding
ENSG00000224596 (ZMIZ1-AS1)
ZMIZ1 antisense RNA 1 		ENST00000428862 (ZMIZ1-AS1-004) 78943328-78962394 antisense
ENST00000440151 (ZMIZ1-AS1-002) 79044148-79067468 antisense
ENST00000456353 (ZMIZ1-AS1-001) 78943328-79067895 antisense
ENSG00000227136 (LINC00595)
long intergenic non-protein coding RNA 595 		ENST00000415959 (LINC00595-001) 78267328-78278065 lincRNA
ENST00000459633 (LINC00595-004) 78267442-78330595 lincRNA
ENST00000461034 (LINC00595-002) 78267379-78302046 lincRNA
ENST00000476909 (LINC00595-003) 78267410-78280213 lincRNA
ENSG00000228683 (RP11-31E13.2)
 ENST00000455498 (RP11-31E13.2-001) 78696062-78697022 lincRNA
ENSG00000229569 (RP11-481G8.2)
 ENST00000427035 (RP11-481G8.2-001) 79000484-79003803 lincRNA
ENSG00000230229 (RP11-90J7.4)
 ENST00000416341 (RP11-90J7.4-001) 78352597-78356100 lincRNA
ENSG00000230417 (LINC00856)
long intergenic non-protein coding RNA 856 		ENST00000421324 (LINC00856-006) 78238255-78675109 lincRNA
ENST00000423770 (LINC00856-003) 78248808-78250451 lincRNA
ENST00000432742 (LINC00856-002) 78248808-78353336 lincRNA
ENST00000434974 (LINC00856-001) 78248748-78252645 lincRNA
ENST00000510550 (LINC00856-005) 78406544-78550857 lincRNA
ENST00000624665 (LINC00856-004) 78248740-78551355 lincRNA
ENSG00000231957 (GNAI2P2)
guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 pseudogene 2 		ENST00000417003 (GNAI2P2-001) 78068623-78069538 processed_pseudogene
CIL_0007AW_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025290-ENSMUSG00000007817 CGP 10090 14:24490681-25666743
GeneTranscriptPositionBiotype
ENSMUSG00000007817 (Zmiz1)
zinc finger, MIZ-type containing 1 		ENSMUST00000007961 (Zmiz1-002) 25459267-25664719 protein_coding
ENSMUST00000159766 (Zmiz1-003) 25459292-25649574 retained_intron
ENSMUST00000160190 (Zmiz1-007) 25607357-25643657 processed_transcript
ENSMUST00000160229 (Zmiz1-008) 25607838-25645735 protein_coding
ENSMUST00000160680 (Zmiz1-005) 25459555-25572030 processed_transcript
ENSMUST00000161766 (Zmiz1-004) 25459185-25538492 retained_intron
ENSMUST00000162546 (Zmiz1-006) 25656830-25658405 retained_intron
ENSMUST00000162645 (Zmiz1-001) 25459224-25666743 protein_coding
ENSMUSG00000025290 (Rps24)
ribosomal protein S24 		ENSMUST00000112384 (Rps24-201) 24490681-24495432 protein_coding
ENSMUST00000169826 (Rps24-202) 24490681-24496146 protein_coding
ENSMUSG00000038792 (4931403M11Rik)
RIKEN cDNA 4931403M11 gene 		ENSMUST00000038250 (4931403M11Rik-001) 24617568-24621693 lincRNA
ENSMUSG00000048628 (4930542C16Rik)
RIKEN cDNA 4930542C16 gene 		ENSMUST00000062438 (4930542C16Rik-001) 24615118-24617304 lincRNA
ENSMUST00000159360 (4930542C16Rik-002) 24606704-24617311 lincRNA
ENSMUSG00000072686 (Gm10398)
predicted gene 10398 		ENSMUST00000100826 (Gm10398-001) 24909414-24913440 lincRNA
ENSMUSG00000089887 (4930428N03Rik)
RIKEN cDNA 4930428N03 gene 		ENSMUST00000159562 (4930428N03Rik-002) 24622159-24629200 lincRNA
ENSMUST00000159744 (4930428N03Rik-001) 24622138-24622860 lincRNA
ENSMUSG00000097136 (Gm26772)
predicted gene, 26772 		ENSMUST00000180466 (Gm26772-201) 25548390-25554369 lincRNA
ENSMUSG00000097601 (Gm26660)
predicted gene, 26660 		ENSMUST00000181582 (Gm26660-201) 25355801-25378635 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007AW_0001ENSDARG00000039347ENSDART00000100813ENSDART00000133404ENSDART00000134691ENSDART00000141945ENSDART00000143934ENSDART00000147729ENSDARG00000074502ENSDART00000110884ENSDART00000113617ENSDART00000143569CIL_0007AW_0002ENSG00000108175ENST00000334512ENST00000446377ENST00000472035ENST00000478357ENST00000611351ENSG00000138326ENST00000360830ENST00000372360ENST00000435275ENST00000440692ENST00000464716ENST00000465692ENST00000466129ENST00000475468ENST00000476545ENST00000478655ENST00000480662ENST00000482069ENST00000485708ENST00000613865ENSG00000224596ENST00000428862ENST00000440151ENST00000456353ENSG00000227136ENST00000415959ENST00000459633ENST00000461034ENST00000476909ENSG00000228683ENST00000455498ENSG00000229569ENST00000427035ENSG00000230229ENST00000416341ENSG00000230417ENST00000421324ENST00000423770ENST00000432742ENST00000434974ENST00000510550ENST00000624665ENSG00000231957ENST00000417003CIL_0007AW_0003ENSMUSG00000007817ENSMUST00000007961ENSMUST00000159766ENSMUST00000160190ENSMUST00000160229ENSMUST00000160680ENSMUST00000161766ENSMUST00000162546ENSMUST00000162645ENSMUSG00000025290ENSMUST00000112384ENSMUST00000169826ENSMUSG00000038792ENSMUST00000038250ENSMUSG00000048628ENSMUST00000062438ENSMUST00000159360ENSMUSG00000072686ENSMUST00000100826ENSMUSG00000089887ENSMUST00000159562ENSMUST00000159744ENSMUSG00000097136ENSMUST00000180466ENSMUSG00000097601ENSMUST00000181582
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007AW_0001ENSDARG00000039347ENSDART00000100813ENSDART00000133404ENSDART00000143934ENSDART00000147729ENSDARG00000074502ENSDART00000110884ENSDART00000113617ENSDART00000143569CIL_0007AW_0002ENSG00000108175ENST00000334512ENST00000472035ENST00000611351ENSG00000138326ENST00000360830ENST00000372360ENST00000435275ENST00000464716ENST00000485708ENSG00000224596ENST00000428862ENST00000440151ENST00000456353ENSG00000227136ENST00000415959ENST00000459633ENST00000461034ENST00000476909ENSG00000228683ENST00000455498ENSG00000229569ENST00000427035ENSG00000230229ENST00000416341ENSG00000230417ENST00000421324ENST00000423770ENST00000432742ENST00000434974ENST00000510550ENST00000624665ENSG00000231957ENST00000417003CIL_0007AW_0003ENSMUSG00000007817ENSMUST00000007961ENSMUST00000162645ENSMUSG00000025290ENSMUST00000112384ENSMUST00000169826ENSMUSG00000038792ENSMUST00000038250ENSMUSG00000048628ENSMUST00000062438ENSMUST00000159360ENSMUSG00000072686ENSMUST00000100826ENSMUSG00000089887ENSMUST00000159562ENSMUST00000159744ENSMUSG00000097136ENSMUST00000180466ENSMUSG00000097601ENSMUST00000181582
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039347 ENSDART00000100813 N/A N/A N/A 86.430±43.76 N/A N/A 744.843±0.00 402.572±0.00 387.194±0.00 N/A 314.079±0.00 N/A N/A N/A
ENSDART00000133404 N/A N/A N/A 49.711±1.25 N/A N/A 239.516±49.71 446.914±0.00 147.162±0.00 N/A 64.929±0.00 N/A N/A N/A
ENSDART00000134691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143934 N/A N/A N/A 19.070±5.49 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147729 N/A N/A N/A N/A N/A N/A 2.025±0.00 1.033±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000074502 ENSDART00000110884 N/A N/A N/A 1.511±0.00 N/A N/A N/A 2.530±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000113617 N/A N/A N/A 10.664±1.79 N/A N/A 4.277±0.51 3.287±0.75 0.115±0.00 N/A 0.826±0.00 N/A N/A N/A
ENSDART00000143569 N/A N/A N/A N/A N/A N/A N/A N/A 0.101±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108175 ENST00000334512 8.471±0.00 7.854±0.00 0.899±0.00 2.952±2.16 13.235±0.00 2.404±0.00 4.438±4.00 5.735±4.69 2.453±0.53 5.277±3.90 10.071±0.00 18.864±19.85 7.045±4.67 3.307±2.62
ENST00000446377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472035 N/A N/A N/A N/A N/A N/A 6.400±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000478357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611351 5.823±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 5.803±0.00 N/A N/A N/A N/A
ENSG00000138326 ENST00000360830 420.235±0.00 511.409±0.00 13.050±0.00 148.085±32.12 272.893±86.57 293.323±234.77 77.663±60.14 128.050±58.52 143.776±34.22 398.325±309.37 69.650±49.76 1156.288±899.87 723.173±67.90 410.152±58.20
ENST00000372360 136.060±0.00 158.003±0.00 N/A N/A 82.014±0.00 N/A N/A N/A 84.507±0.00 31.788±0.00 N/A 579.228±476.46 147.457±0.00 122.597±0.00
ENST00000435275 N/A N/A 17.368±0.00 N/A 114.995±0.00 116.266±70.41 N/A 86.855±71.10 49.279±29.28 100.032±76.50 92.591±0.00 161.920±135.21 140.690±42.43 90.992±0.00
ENST00000440692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464716 N/A N/A 30.166±0.00 N/A N/A 72.328±0.00 15.229±0.00 43.677±0.00 65.094±0.00 33.518±0.00 N/A 96.356±0.00 N/A N/A
ENST00000465692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485708 N/A N/A N/A 50.261±7.14 N/A 100.626±0.00 80.339±49.22 N/A 46.402±0.00 N/A 368.269±283.32 N/A N/A N/A
ENST00000613865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224596 ENST00000428862 N/A N/A 0.026±0.00 N/A N/A N/A 0.027±0.00 0.511±0.00 0.157±0.00 N/A N/A 0.237±0.14 N/A 0.574±0.00
ENST00000440151 N/A N/A N/A 0.334±0.00 N/A N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A
ENST00000456353 0.137±0.00 N/A N/A 0.148±0.00 N/A 0.018±0.00 0.027±0.00 0.248±0.00 0.036±0.01 0.234±0.11 N/A 0.081±0.00 0.247±0.06 N/A
ENSG00000227136 ENST00000415959 N/A N/A N/A N/A N/A 1.109±0.00 N/A N/A N/A N/A N/A N/A N/A 0.169±0.07
ENST00000459633 N/A N/A N/A 0.655±0.00 0.296±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.110±0.04
ENST00000461034 N/A N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A N/A N/A 0.032±0.00 N/A 0.038±0.00
ENST00000476909 N/A 0.187±0.00 N/A 0.171±0.00 N/A 0.780±0.00 0.218±0.00 N/A 0.020±0.00 N/A N/A 0.062±0.00 N/A 0.119±0.03
ENSG00000228683 ENST00000455498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.096±0.00
ENSG00000229569 ENST00000427035 0.025±0.00 0.104±0.00 N/A 0.059±0.00 0.046±0.00 0.016±0.00 0.016±0.00 0.058±0.03 0.008±0.00 0.095±0.00 N/A 0.049±0.00 N/A 0.057±0.01
ENSG00000230229 ENST00000416341 N/A N/A N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A 0.114±0.00 N/A N/A
ENSG00000230417 ENST00000421324 N/A N/A N/A N/A N/A N/A 0.113±0.00 0.116±0.00 0.042±0.00 N/A N/A N/A N/A 0.050±0.02
ENST00000423770 N/A N/A N/A 0.865±0.00 N/A N/A N/A N/A N/A 0.380±0.00 N/A 0.242±0.17 N/A N/A
ENST00000432742 N/A N/A N/A N/A 0.410±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434974 N/A N/A N/A 0.131±0.07 0.032±0.01 0.006±0.00 N/A N/A 0.028±0.00 N/A N/A 0.011±0.00 N/A 0.035±0.01
ENST00000510550 N/A N/A N/A 0.229±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.00
ENST00000624665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.038±0.00 N/A N/A
ENSG00000231957 ENST00000417003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.038±0.01 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007817 ENSMUST00000007961 1.969±0.00 4.979±1.03 N/A 3.328±0.00 3.233±0.21 4.122±1.57 N/A N/A 0.957±0.16 N/A 0.888±0.00 4.714±2.51 7.075±2.75 0.648±0.00
ENSMUST00000159766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162645 11.185±5.03 24.252±6.76 5.744±3.29 15.336±7.31 13.038±6.10 13.139±3.57 7.054±2.27 13.025±1.03 2.624±0.90 18.377±0.99 1.483±0.68 12.239±7.54 10.386±4.91 1.117±0.00
ENSMUSG00000025290 ENSMUST00000112384 459.793±154.01 35.372±11.87 1695.065±142.63 613.710±234.38 535.799±188.91 396.797±67.67 342.438±11.50 365.775±20.21 842.138±768.63 325.305±10.75 172.536±64.01 551.808±549.99 958.098±471.83 606.300±49.24
ENSMUST00000169826 N/A N/A N/A 87.474±0.00 N/A N/A N/A N/A 102.038±80.78 N/A N/A 203.760±142.08 284.783±183.60 224.936±0.00
ENSMUSG00000038792 ENSMUST00000038250 0.033±0.00 N/A 0.036±0.01 0.025±0.00 N/A N/A 0.057±0.00 N/A 0.015±0.00 N/A N/A 0.045±0.00 N/A 1.400±0.63
ENSMUSG00000048628 ENSMUST00000062438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.222±3.41
ENSMUST00000159360 N/A N/A N/A 0.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000072686 ENSMUST00000100826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.209±0.07
ENSMUSG00000089887 ENSMUST00000159562 N/A N/A 0.031±0.02 0.087±0.00 N/A N/A 0.038±0.00 0.040±0.00 N/A N/A N/A 0.048±0.00 0.007±0.00 16.120±0.81
ENSMUST00000159744 N/A N/A N/A 0.129±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 72.055±72.47
ENSMUSG00000097136 ENSMUST00000180466 0.162±0.06 0.396±0.08 0.362±0.00 0.265±0.13 0.457±0.13 0.348±0.15 0.146±0.03 0.234±0.07 0.068±0.02 0.498±0.08 0.027±0.02 0.451±0.18 0.196±0.07 0.096±0.05
ENSMUSG00000097601 ENSMUST00000181582 0.074±0.01 0.250±0.05 N/A 0.407±0.24 0.192±0.07 0.087±0.02 0.086±0.00 0.077±0.03 0.051±0.05 0.136±0.00 0.086±0.02 0.402±0.26 0.090±0.07 0.033±0.02

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