C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007BF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000149654-ENSG00000080189 CGP 9606 20:46173733-46364458
GeneTranscriptPositionBiotype
ENSG00000080189 (SLC35C2)
solute carrier family 35 (GDP-fucose transporter), member C2 		ENST00000243896 (SLC35C2-002) 46349528-46364401 protein_coding
ENST00000317734 (SLC35C2-201) 46349530-46364458 protein_coding
ENST00000372227 (SLC35C2-003) 46349528-46363174 protein_coding
ENST00000372230 (SLC35C2-013) 46349528-46364395 protein_coding
ENST00000420518 (SLC35C2-006) 46352164-46358506 protein_coding
ENST00000424568 (SLC35C2-007) 46355104-46358764 protein_coding
ENST00000480329 (SLC35C2-009) 46350355-46355195 processed_transcript
ENST00000481809 (SLC35C2-011) 46352150-46364381 processed_transcript
ENST00000484188 (SLC35C2-008) 46358427-46364361 processed_transcript
ENST00000484318 (SLC35C2-012) 46352123-46364390 processed_transcript
ENST00000487729 (SLC35C2-010) 46350771-46357701 processed_transcript
ENST00000493599 (SLC35C2-004) 46349528-46353197 processed_transcript
ENST00000543605 (SLC35C2-001) 46345980-46364404 protein_coding
ENSG00000149654 (CDH22)
cadherin 22, type 2 		ENST00000372262 (CDH22-001) 46173733-46251695 protein_coding
ENST00000474438 (CDH22-002) 46209821-46220849 processed_transcript
ENST00000537909 (CDH22-201) 46173734-46308498 protein_coding
CIL_0007BF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053166-ENSMUSG00000017664 CGP 10090 2:165111507-165287869
GeneTranscriptPositionBiotype
ENSMUSG00000017664 (Slc35c2)
solute carrier family 35, member C2 		ENSMUST00000017808 (Slc35c2-008) 165276554-165287827 protein_coding
ENSMUST00000109298 (Slc35c2-014) 165276554-165287755 protein_coding
ENSMUST00000109299 (Slc35c2-013) 165276554-165287755 protein_coding
ENSMUST00000109300 (Slc35c2-012) 165276554-165287869 protein_coding
ENSMUST00000125550 (Slc35c2-015) 165276554-165277841 retained_intron
ENSMUST00000129210 (Slc35c2-002) 165280874-165286552 protein_coding
ENSMUST00000129336 (Slc35c2-005) 165278354-165283368 protein_coding
ENSMUST00000130393 (Slc35c2-001) 165282879-165287772 protein_coding
ENSMUST00000131409 (Slc35c2-016) 165280879-165287827 protein_coding
ENSMUST00000132270 (Slc35c2-004) 165276554-165287824 nonsense_mediated_decay
ENSMUST00000133961 (Slc35c2-009) 165280786-165287836 protein_coding
ENSMUST00000145301 (Slc35c2-006) 165278390-165283600 nonsense_mediated_decay
ENSMUST00000147247 (Slc35c2-011) 165281549-165287838 retained_intron
ENSMUST00000154608 (Slc35c2-007) 165277452-165282223 retained_intron
ENSMUST00000155289 (Slc35c2-003) 165280617-165283600 protein_coding
ENSMUST00000156134 (Slc35c2-010) 165280786-165287835 protein_coding
ENSMUSG00000053166 (Cdh22)
cadherin 22 		ENSMUST00000065438 (Cdh22-001) 165111507-165234853 protein_coding
ENSMUST00000138643 (Cdh22-002) 165112327-165181459 nonsense_mediated_decay
ENSMUSG00000086630 (Gm14397)
predicted gene 14397 		ENSMUST00000124728 (Gm14397-001) 165159412-165163969 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007BF_0001ENSG00000080189ENST00000243896ENST00000317734ENST00000372227ENST00000372230ENST00000420518ENST00000424568ENST00000480329ENST00000481809ENST00000484188ENST00000484318ENST00000487729ENST00000493599ENST00000543605ENSG00000149654ENST00000372262ENST00000474438ENST00000537909CIL_0007BF_0002ENSMUSG00000017664ENSMUST00000017808ENSMUST00000109298ENSMUST00000109299ENSMUST00000109300ENSMUST00000125550ENSMUST00000129210ENSMUST00000129336ENSMUST00000130393ENSMUST00000131409ENSMUST00000132270ENSMUST00000133961ENSMUST00000145301ENSMUST00000147247ENSMUST00000154608ENSMUST00000155289ENSMUST00000156134ENSMUSG00000053166ENSMUST00000065438ENSMUST00000138643ENSMUSG00000086630ENSMUST00000124728
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007BF_0001ENSG00000080189ENST00000243896ENST00000317734ENST00000372227ENST00000372230ENST00000424568ENST00000480329ENST00000484318ENST00000487729ENST00000493599ENST00000543605ENSG00000149654ENST00000372262ENST00000474438ENST00000537909CIL_0007BF_0002ENSMUSG00000017664ENSMUST00000017808ENSMUST00000109298ENSMUST00000109299ENSMUST00000109300ENSMUST00000125550ENSMUST00000129210ENSMUST00000133961ENSMUST00000147247ENSMUST00000154608ENSMUST00000156134ENSMUSG00000053166ENSMUST00000065438ENSMUST00000138643ENSMUSG00000086630ENSMUST00000124728
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000080189 ENST00000243896 N/A N/A N/A 2.045±0.00 3.615±0.00 N/A N/A N/A N/A N/A N/A 5.317±0.00 3.736±0.00 N/A
ENST00000317734 8.025±0.00 6.449±0.00 N/A 2.069±0.67 N/A N/A N/A 6.027±2.49 N/A N/A 2.023±1.70 6.424±5.07 6.624±0.00 7.466±0.27
ENST00000372227 N/A 3.234±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372230 N/A 4.972±0.00 N/A 2.011±0.06 5.051±1.63 3.359±1.33 1.634±1.23 4.639±0.00 4.653±3.16 6.923±0.00 N/A 9.992±6.12 13.568±2.82 4.141±0.36
ENST00000420518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.732±0.00 N/A N/A N/A
ENST00000480329 N/A N/A N/A N/A N/A N/A N/A N/A 6.673±0.00 N/A 0.688±0.00 6.750±4.91 N/A N/A
ENST00000481809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484318 8.446±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.898±0.00 1.178±0.00 N/A N/A N/A
ENST00000487729 N/A N/A N/A N/A N/A N/A 5.220±0.00 N/A N/A 8.898±0.00 3.995±0.00 N/A 15.191±0.00 12.752±0.69
ENST00000493599 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.803±0.00 N/A N/A N/A N/A
ENST00000543605 N/A N/A 0.196±0.00 N/A 0.479±0.00 0.298±0.08 N/A N/A N/A N/A 0.624±0.00 1.051±0.00 N/A N/A
ENSG00000149654 ENST00000372262 0.072±0.00 0.148±0.00 N/A 4.967±2.86 0.044±0.00 0.041±0.00 N/A N/A N/A 0.130±0.00 0.202±0.00 0.295±0.32 0.060±0.01 0.957±0.54
ENST00000474438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.120±0.00 N/A 0.144±0.00 0.350±0.11
ENST00000537909 N/A N/A N/A N/A N/A N/A 0.519±0.00 0.242±0.00 N/A N/A N/A N/A 0.192±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017664 ENSMUST00000017808 5.210±0.00 N/A 5.012±0.00 2.937±0.00 6.423±0.00 2.691±0.00 4.661±2.77 7.512±3.41 5.021±0.77 5.353±1.83 N/A 5.306±3.07 5.934±0.56 5.920±2.46
ENSMUST00000109298 6.559±0.17 9.541±2.88 N/A 1.272±0.00 N/A 4.683±0.67 N/A N/A 3.741±0.61 3.781±0.00 N/A 3.216±1.01 5.044±2.86 N/A
ENSMUST00000109299 N/A N/A N/A 6.431±0.00 N/A N/A 1.588±0.00 N/A N/A N/A N/A 4.797±2.28 6.367±5.54 N/A
ENSMUST00000109300 10.588±0.57 18.675±2.79 9.168±0.55 10.801±2.04 14.819±7.34 9.076±1.79 4.623±0.40 9.504±0.99 9.737±3.65 8.535±0.75 4.510±1.35 10.869±1.90 11.639±1.08 8.856±1.15
ENSMUST00000125550 N/A N/A N/A 4.318±0.00 N/A N/A N/A N/A N/A N/A N/A 6.613±0.00 N/A N/A
ENSMUST00000129210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.842±0.00 N/A N/A
ENSMUST00000129336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133961 N/A 19.297±2.72 N/A N/A 14.119±1.85 8.212±1.51 N/A 7.196±0.59 6.205±0.56 8.855±1.56 N/A 14.813±0.00 N/A 8.116±0.43
ENSMUST00000145301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147247 N/A N/A N/A N/A 1.359±0.00 N/A N/A N/A N/A N/A N/A 3.193±1.68 N/A N/A
ENSMUST00000154608 N/A N/A N/A N/A 8.469±0.00 N/A N/A N/A N/A N/A N/A 5.120±0.77 N/A N/A
ENSMUST00000155289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156134 N/A N/A N/A N/A N/A 11.128±1.25 N/A N/A 18.770±0.00 N/A N/A 11.236±1.24 N/A 8.220±0.26
ENSMUSG00000053166 ENSMUST00000065438 0.037±0.01 1.115±0.59 0.449±0.03 11.212±6.94 0.257±0.07 0.065±0.02 0.186±0.08 0.048±0.04 0.016±0.01 0.767±0.28 0.188±0.16 0.973±0.20 0.067±0.02 0.060±0.05
ENSMUST00000138643 0.014±0.00 0.574±0.00 0.115±0.02 6.570±6.61 0.052±0.01 0.062±0.03 0.170±0.10 0.024±0.01 0.003±0.00 0.168±0.00 0.085±0.05 0.616±0.30 0.051±0.03 0.082±0.07
ENSMUSG00000086630 ENSMUST00000124728 N/A N/A N/A 0.055±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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