C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007BN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168612-ENSG00000149634 CGP 9606 20:45881227-45887635
GeneTranscriptPositionBiotype
ENSG00000149634 (SPATA25)
spermatogenesis associated 25
ENST00000372519 (SPATA25-001) 45886489-45887635 protein_coding
ENSG00000168612 (ZSWIM1)
zinc finger, SWIM-type containing 1
ENST00000372520 (ZSWIM1-201) 45881241-45885265 protein_coding
ENST00000372523 (ZSWIM1-002) 45881227-45885266 protein_coding
CIL_0007BN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017764-ENSMUSG00000017767 CGP 10090 2:164822686-164828537
GeneTranscriptPositionBiotype
ENSMUSG00000017764 (Zswim1)
zinc finger SWIM-type containing 1
ENSMUST00000017908 (Zswim1-001) 164822686-164826871 protein_coding
ENSMUST00000132282 (Zswim1-002) 164823013-164825268 protein_coding
ENSMUSG00000017767 (Spata25)
spermatogenesis associated 25
ENSMUST00000017911 (Spata25-001) 164827382-164828537 protein_coding
ENSMUST00000141411 (Spata25-002) 164826389-164828528 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007BN_0001ENSG00000149634ENST00000372519ENSG00000168612ENST00000372520ENST00000372523CIL_0007BN_0002ENSMUSG00000017764ENSMUST00000017908ENSMUST00000132282ENSMUSG00000017767ENSMUST00000017911ENSMUST00000141411
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007BN_0001ENSG00000149634ENST00000372519ENSG00000168612ENST00000372520ENST00000372523CIL_0007BN_0002ENSMUSG00000017764ENSMUST00000017908ENSMUST00000132282ENSMUSG00000017767ENSMUST00000017911ENSMUST00000141411
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000149634 ENST00000372519 1.009±0.00 N/A 0.291±0.00 0.345±0.10 0.625±0.01 0.185±0.00 0.301±0.24 0.881±0.79 0.626±0.00 0.039±0.00 1.281±0.00 0.664±0.44 0.348±0.24 8.102±1.03
ENSG00000168612 ENST00000372520 0.851±0.00 N/A 0.271±0.00 0.282±0.00 0.803±0.53 0.647±0.12 1.560±0.66 1.092±0.00 0.932±0.00 0.696±0.40 1.804±0.26 2.736±0.83 1.442±0.06 2.304±0.26
ENST00000372523 1.539±0.00 2.629±0.00 N/A 1.673±0.00 1.727±0.02 1.163±0.32 0.591±0.37 3.159±0.00 0.828±0.00 1.033±0.57 1.491±0.00 1.080±0.53 1.088±0.35 1.280±0.34
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017764 ENSMUST00000017908 4.132±0.75 8.670±1.14 2.789±0.36 4.049±2.98 4.255±1.66 4.810±0.38 1.716±0.21 4.077±0.38 1.577±0.48 4.296±0.70 2.081±0.38 5.119±2.17 6.771±3.86 9.308±4.14
ENSMUST00000132282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.002±0.00 N/A N/A N/A
ENSMUSG00000017767 ENSMUST00000017911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 63.549±23.75
ENSMUST00000141411 N/A N/A N/A 4.041±0.00 6.197±0.00 N/A N/A N/A N/A N/A N/A 2.810±0.00 4.934±0.00 8.662±0.00

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