C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007C9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000044457-ENSDARG00000070839 CGP 7955 6:28717858-28800269
GeneTranscriptPositionBiotype
ENSDARG00000044457 (gfi1ab)
growth factor independent 1ab 		ENSDART00000065139 (gfi1ab-001) 28717858-28721289 protein_coding
ENSDARG00000070839 (evi5b)
ecotropic viral integration site 5b 		ENSDART00000104337 (evi5b-201) 28756951-28798350 protein_coding
ENSDART00000111682 (evi5b-202) 28725747-28776413 protein_coding
ENSDART00000124947 (evi5b-001) 28725707-28800269 protein_coding
ENSDART00000135825 (evi5b-003) 28775446-28798447 processed_transcript
ENSDART00000139421 (evi5b-002) 28725707-28798350 processed_transcript
ENSDART00000144820 (evi5b-005) 28758435-28759089 retained_intron
ENSDART00000145761 (evi5b-004) 28758793-28766668 processed_transcript
CIL_0007C9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162676-ENSG00000067208 CGP 9606 1:92474762-92792404
GeneTranscriptPositionBiotype
ENSG00000067208 (EVI5)
ecotropic viral integration site 5 		ENST00000370331 (EVI5-001) 92508696-92792404 protein_coding
ENST00000466778 (EVI5-002) 92736560-92784966 processed_transcript
ENST00000468580 (EVI5-004) 92607616-92677177 processed_transcript
ENST00000474806 (EVI5-003) 92703858-92785106 processed_transcript
ENST00000491940 (EVI5-005) 92563642-92665955 processed_transcript
ENST00000492513 (EVI5-006) 92607449-92625934 processed_transcript
ENST00000492613 (EVI5-007) 92625690-92677218 processed_transcript
ENST00000540033 (EVI5-201) 92508696-92792404 protein_coding
ENSG00000201317 (RNU4-59P)
RNA, U4 small nuclear 59, pseudogene 		ENST00000364447 (RNU4-59P-201) 92700819-92700934 snRNA
ENSG00000223787 (RP4-593M8.1)
 ENST00000413730 (RP4-593M8.1-001) 92580476-92580821 processed_pseudogene
ENSG00000223896 (CCNJP2)
cyclin J pseudogene 2 		ENST00000457810 (CCNJP2-001) 92755794-92756956 processed_pseudogene
ENSG00000225505 (RP11-330C7.3)
 ENST00000440471 (RP11-330C7.3-001) 92732000-92733257 processed_pseudogene
ENSG00000229992 (HMGB3P9)
high mobility group box 3 pseudogene 9 		ENST00000441799 (HMGB3P9-001) 92647048-92647630 processed_pseudogene
ENSG00000234202 (RP11-330C7.4)
 ENST00000429959 (RP11-330C7.4-001) 92749175-92749330 processed_pseudogene
CIL_0007C9_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029275-ENSMUSG00000011831 CGP 10090 5:107716657-107875107
GeneTranscriptPositionBiotype
ENSMUSG00000011831 (Evi5)
ecotropic viral integration site 5 		ENSMUST00000112642 (Evi5-001) 107744795-107875107 protein_coding
ENSMUST00000124034 (Evi5-005) 107813576-107869168 protein_coding
ENSMUST00000124590 (Evi5-012) 107815161-107816809 retained_intron
ENSMUST00000127579 (Evi5-010) 107821734-107868899 processed_transcript
ENSMUST00000128723 (Evi5-006) 107788287-107869168 protein_coding
ENSMUST00000132406 (Evi5-004) 107872630-107875052 processed_transcript
ENSMUST00000132482 (Evi5-003) 107815611-107875044 processed_transcript
ENSMUST00000133411 (Evi5-008) 107850070-107875056 processed_transcript
ENSMUST00000136677 (Evi5-013) 107764762-107799546 retained_intron
ENSMUST00000138111 (Evi5-002) 107815611-107875059 protein_coding
ENSMUST00000141673 (Evi5-011) 107819624-107837480 retained_intron
ENSMUST00000155897 (Evi5-007) 107747276-107809782 retained_intron
ENSMUST00000155955 (Evi5-009) 107819660-107868388 protein_coding
ENSMUSG00000029275 (Gfi1)
growth factor independent 1 		ENSMUST00000031205 (Gfi1-002) 107716657-107724343 protein_coding
ENSMUST00000065478 (Gfi1-201) 107716666-107725805 protein_coding
ENSMUST00000159164 (Gfi1-001) 107716657-107725805 protein_coding
ENSMUST00000159263 (Gfi1-003) 107721606-107726036 protein_coding
ENSMUST00000165344 (Gfi1-202) 107717224-107723961 protein_coding
ENSMUSG00000063447 (Ube2d2b)
ubiquitin-conjugating enzyme E2D 2B 		ENSMUST00000072578 (Ube2d2b-001) 107830099-107831776 protein_coding
ENSMUSG00000083609 (Gm16007)
predicted gene 16007 		ENSMUST00000117837 (Gm16007-001) 107844390-107844675 processed_pseudogene
ENSMUSG00000090030 (A430072P03Rik)
RIKEN cDNA A430072P03 gene 		ENSMUST00000161480 (A430072P03Rik-001) 107725157-107727104 processed_transcript
ENSMUST00000162148 (A430072P03Rik-002) 107726398-107728801 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007C9_0001ENSDARG00000044457ENSDART00000065139ENSDARG00000070839ENSDART00000104337ENSDART00000111682ENSDART00000124947ENSDART00000135825ENSDART00000139421ENSDART00000144820ENSDART00000145761CIL_0007C9_0002ENSG00000067208ENST00000370331ENST00000466778ENST00000468580ENST00000474806ENST00000491940ENST00000492513ENST00000492613ENST00000540033ENSG00000201317ENST00000364447ENSG00000223787ENST00000413730ENSG00000223896ENST00000457810ENSG00000225505ENST00000440471ENSG00000229992ENST00000441799ENSG00000234202ENST00000429959CIL_0007C9_0003ENSMUSG00000011831ENSMUST00000112642ENSMUST00000124034ENSMUST00000124590ENSMUST00000127579ENSMUST00000128723ENSMUST00000132406ENSMUST00000132482ENSMUST00000133411ENSMUST00000136677ENSMUST00000138111ENSMUST00000141673ENSMUST00000155897ENSMUST00000155955ENSMUSG00000029275ENSMUST00000031205ENSMUST00000065478ENSMUST00000159164ENSMUST00000159263ENSMUST00000165344ENSMUSG00000063447ENSMUST00000072578ENSMUSG00000083609ENSMUST00000117837ENSMUSG00000090030ENSMUST00000161480ENSMUST00000162148
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007C9_0001ENSDARG00000044457ENSDART00000065139ENSDARG00000070839ENSDART00000104337ENSDART00000139421CIL_0007C9_0002ENSG00000067208ENST00000370331ENST00000468580ENST00000491940ENST00000540033ENSG00000201317ENST00000364447ENSG00000223787ENST00000413730ENSG00000223896ENST00000457810ENSG00000225505ENST00000440471ENSG00000229992ENST00000441799ENSG00000234202ENST00000429959CIL_0007C9_0003ENSMUSG00000011831ENSMUST00000112642ENSMUST00000124034ENSMUST00000127579ENSMUST00000128723ENSMUST00000136677ENSMUST00000138111ENSMUST00000155897ENSMUSG00000029275ENSMUST00000031205ENSMUST00000065478ENSMUST00000159164ENSMUST00000159263ENSMUST00000165344ENSMUSG00000063447ENSMUST00000072578ENSMUSG00000083609ENSMUST00000117837ENSMUSG00000090030ENSMUST00000161480ENSMUST00000162148
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000044457 ENSDART00000065139 N/A N/A N/A 0.235±0.12 N/A N/A 0.755±0.08 0.277±0.00 0.034±0.00 N/A 0.423±0.00 N/A N/A N/A
ENSDARG00000070839 ENSDART00000104337 N/A N/A N/A N/A N/A N/A 1.406±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000111682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000124947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139421 N/A N/A N/A 3.933±0.00 N/A N/A 1.302±0.09 3.327±0.00 0.302±0.00 N/A 1.162±0.00 N/A N/A N/A
ENSDART00000144820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000067208 ENST00000370331 N/A 0.425±0.00 N/A 0.811±0.00 0.457±0.00 N/A N/A N/A 0.588±0.00 1.228±0.00 N/A 0.665±0.14 2.226±1.16 0.953±0.00
ENST00000466778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.659±0.00 5.299±0.00 N/A
ENST00000474806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491940 N/A N/A N/A 4.806±0.00 N/A N/A 1.941±0.00 3.418±0.00 7.530±0.00 N/A 1.072±0.00 N/A N/A 3.178±0.00
ENST00000492513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540033 N/A 1.392±0.00 N/A 0.816±0.00 N/A 0.794±0.23 0.922±0.00 N/A 3.127±0.00 0.927±0.00 0.973±0.00 0.610±0.09 0.241±0.00 1.884±0.49
ENSG00000201317 ENST00000364447 N/A 0.881±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223787 ENST00000413730 N/A N/A N/A 0.611±0.00 0.154±0.00 0.747±0.00 0.209±0.00 4.047±0.00 0.271±0.14 1.617±0.00 N/A 0.233±0.00 0.062±0.00 0.238±0.00
ENSG00000223896 ENST00000457810 N/A 0.088±0.00 0.404±0.00 0.081±0.00 0.365±0.00 0.693±0.00 0.447±0.00 0.516±0.00 N/A 1.339±0.00 N/A 0.310±0.44 0.098±0.00 0.033±0.00
ENSG00000225505 ENST00000440471 0.027±0.00 0.164±0.00 0.109±0.00 0.149±0.12 0.438±0.40 0.041±0.00 0.013±0.00 N/A 0.095±0.00 N/A N/A 0.097±0.11 N/A N/A
ENSG00000229992 ENST00000441799 0.084±0.00 0.088±0.00 1.155±0.00 0.330±0.18 0.335±0.14 0.998±0.00 0.180±0.00 0.473±0.00 1.854±0.00 0.642±0.45 N/A 0.113±0.10 0.570±0.50 0.296±0.08
ENSG00000234202 ENST00000429959 N/A N/A N/A N/A N/A 4.007±0.00 N/A N/A 1.998±0.00 N/A N/A 14.120±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000011831 ENSMUST00000112642 N/A 1.843±0.20 2.234±0.59 2.206±0.19 1.710±0.12 1.178±0.43 0.706±0.12 3.932±2.63 7.684±4.35 N/A N/A 2.130±0.43 6.574±4.08 1.379±0.30
ENSMUST00000124034 5.497±3.27 11.883±2.75 N/A N/A 3.162±0.64 4.475±1.68 1.349±0.08 8.220±1.22 6.047±0.00 7.805±0.85 N/A 14.618±2.32 3.515±0.00 3.983±0.51
ENSMUST00000124590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127579 N/A N/A N/A N/A 5.090±1.46 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128723 N/A 2.121±0.00 N/A 3.542±0.00 N/A N/A N/A N/A N/A N/A 0.573±0.00 N/A 5.215±0.00 2.384±0.00
ENSMUST00000132406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136677 N/A N/A N/A 12.203±0.00 N/A N/A N/A N/A N/A N/A N/A 24.420±0.00 14.060±0.00 14.049±0.00
ENSMUST00000138111 N/A N/A N/A 8.892±0.00 N/A N/A N/A N/A N/A N/A N/A 15.909±0.00 8.058±2.68 N/A
ENSMUST00000141673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155897 2.034±0.82 4.901±1.01 N/A 3.835±0.00 2.524±0.43 2.514±0.67 1.102±0.00 4.623±0.73 8.002±1.41 3.192±0.13 N/A 6.639±1.94 3.537±1.16 2.721±0.18
ENSMUST00000155955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029275 ENSMUST00000031205 0.060±0.03 0.134±0.00 0.064±0.00 N/A 0.538±0.46 2.737±1.68 N/A 0.076±0.02 0.403±0.22 0.317±0.13 N/A 0.370±0.18 0.108±0.04 N/A
ENSMUST00000065478 0.025±0.00 0.016±0.01 N/A 0.010±0.00 0.175±0.00 N/A 0.036±0.01 0.047±0.04 0.018±0.00 N/A 0.041±0.02 0.141±0.00 0.138±0.07 N/A
ENSMUST00000159164 0.024±0.00 0.016±0.01 N/A 0.008±0.00 0.151±0.00 N/A 0.032±0.01 0.028±0.01 0.441±0.33 N/A 0.024±0.02 N/A N/A N/A
ENSMUST00000159263 N/A 0.132±0.04 N/A 0.021±0.00 1.227±0.00 N/A N/A 0.113±0.06 2.066±0.00 0.799±0.00 N/A 2.013±0.25 N/A N/A
ENSMUST00000165344 0.133±0.08 0.030±0.00 0.067±0.01 0.055±0.00 0.203±0.10 1.509±0.00 0.039±0.02 0.085±0.02 0.340±0.25 0.162±0.13 0.051±0.00 0.408±0.00 0.353±0.11 N/A
ENSMUSG00000063447 ENSMUST00000072578 0.044±0.03 0.123±0.08 0.030±0.00 0.043±0.03 0.109±0.00 0.048±0.00 0.066±0.01 0.105±0.02 0.396±0.23 0.025±0.00 N/A 0.161±0.07 0.180±0.07 134.587±54.60
ENSMUSG00000083609 ENSMUST00000117837 N/A N/A N/A 0.075±0.00 N/A 1.827±0.21 N/A 0.380±0.00 0.480±0.51 N/A N/A 1.070±0.75 N/A N/A
ENSMUSG00000090030 ENSMUST00000161480 N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A 0.046±0.00 N/A 0.051±0.00 N/A
ENSMUST00000162148 N/A 0.156±0.00 N/A N/A N/A N/A N/A N/A 0.128±0.00 N/A N/A N/A N/A N/A

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