C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007CA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075814-ENSDARG00000010958 CGP 7955 6:28681904-28694625
GeneTranscriptPositionBiotype
ENSDARG00000010958 (glmnb)
glomulin, FKBP associated protein b 		ENSDART00000014661 (glmnb-001) 28684309-28694552 protein_coding
ENSDART00000148925 (glmnb-002) 28684366-28685817 retained_intron
ENSDART00000149428 (glmnb-003) 28688954-28694625 retained_intron
ENSDARG00000075814 (C6H1orf146)
chromosome 1 open reading frame 146 		ENSDART00000109779 (C6H1orf146-202) 28681904-28683897 protein_coding
ENSDART00000113273 (C6H1orf146-201) 28681904-28684370 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0007CA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000203910-ENSG00000174842 CGP 9606 1:92217940-92298987
GeneTranscriptPositionBiotype
ENSG00000122484 (RPAP2)
RNA polymerase II associated protein 2 		ENST00000477322 (RPAP2-003) 92333242-92387233 retained_intron
ENST00000484158 (RPAP2-002) 92299085-92324084 processed_transcript
ENST00000610020 (RPAP2-001) 92298965-92402056 protein_coding
ENSG00000174842 (GLMN)
glomulin, FKBP associated protein 		ENST00000370360 (GLMN-001) 92246402-92298976 protein_coding
ENST00000463560 (GLMN-005) 92262865-92286592 protein_coding
ENST00000471465 (GLMN-006) 92246492-92248408 retained_intron
ENST00000487911 (GLMN-003) 92297521-92298987 retained_intron
ENST00000495106 (GLMN-002) 92246490-92298987 nonsense_mediated_decay
ENST00000495852 (GLMN-004) 92247062-92271652 protein_coding
ENSG00000203910 (C1orf146)
chromosome 1 open reading frame 146 		ENST00000370373 (C1orf146-002) 92218032-92245715 protein_coding
ENST00000370375 (C1orf146-001) 92217940-92245813 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0007CA_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000089798-ENSMUSG00000029276 CGP 10090 5:107508944-107597888
GeneTranscriptPositionBiotype
ENSMUSG00000029276 (Glmn)
glomulin, FKBP associated protein 		ENSMUST00000078021 (Glmn-001) 107548967-107597639 protein_coding
ENSMUST00000082121 (Glmn-002) 107549023-107597888 protein_coding
ENSMUST00000100949 (Glmn-005) 107548969-107597577 protein_coding
ENSMUST00000124140 (Glmn-003) 107575321-107597546 protein_coding
ENSMUST00000124546 (Glmn-006) 107549024-107597544 nonsense_mediated_decay
ENSMUST00000137939 (Glmn-004) 107549022-107551410 retained_intron
ENSMUST00000143113 (Glmn-007) 107575287-107597639 processed_transcript
ENSMUST00000148505 (Glmn-008) 107572280-107597566 processed_transcript
ENSMUSG00000033773 (Rpap2)
RNA polymerase II associated protein 2 		ENSMUST00000065422 (Rpap2-007) 107597735-107661838 protein_coding
ENSMUST00000112650 (Rpap2-003) 107597373-107642679 protein_coding
ENSMUST00000112651 (Rpap2-001) 107597696-107661838 protein_coding
ENSMUST00000112654 (Rpap2-002) 107597717-107642679 protein_coding
ENSMUST00000112655 (Rpap2-008) 107597774-107642669 protein_coding
ENSMUST00000129483 (Rpap2-005) 107597982-107606988 processed_transcript
ENSMUST00000147284 (Rpap2-006) 107597721-107601969 processed_transcript
ENSMUST00000150074 (Rpap2-004) 107597961-107601797 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007CA_0001ENSDARG00000010958ENSDART00000014661ENSDART00000148925ENSDART00000149428ENSDARG00000075814ENSDART00000109779ENSDART00000113273CIL_0007CA_0002ENSG00000122484ENST00000477322ENST00000484158ENST00000610020ENSG00000174842ENST00000370360ENST00000463560ENST00000471465ENST00000487911ENST00000495106ENST00000495852ENSG00000203910ENST00000370373ENST00000370375CIL_0007CA_0003ENSMUSG00000029276ENSMUST00000078021ENSMUST00000082121ENSMUST00000100949ENSMUST00000124140ENSMUST00000124546ENSMUST00000137939ENSMUST00000143113ENSMUST00000148505ENSMUSG00000033773ENSMUST00000065422ENSMUST00000112650ENSMUST00000112651ENSMUST00000112654ENSMUST00000112655ENSMUST00000129483ENSMUST00000147284ENSMUST00000150074
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007CA_0001ENSDARG00000010958ENSDART00000014661ENSDART00000149428ENSDARG00000075814ENSDART00000109779CIL_0007CA_0002ENSG00000122484ENST00000477322ENST00000484158ENST00000610020ENSG00000174842ENST00000370360ENST00000463560ENST00000495106ENSG00000203910ENST00000370373ENST00000370375CIL_0007CA_0003ENSMUSG00000029276ENSMUST00000078021ENSMUST00000082121ENSMUST00000100949ENSMUSG00000033773ENSMUST00000065422ENSMUST00000112650ENSMUST00000112651ENSMUST00000112654ENSMUST00000112655ENSMUST00000147284
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010958 ENSDART00000014661 N/A N/A N/A 0.316±0.08 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149428 N/A N/A N/A 0.325±0.22 N/A N/A N/A 0.179±0.10 N/A N/A N/A N/A N/A N/A
ENSDARG00000075814 ENSDART00000109779 N/A N/A N/A 0.299±0.00 N/A N/A 0.735±0.00 2.528±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000113273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000122484 ENST00000477322 N/A N/A N/A 9.003±0.00 N/A N/A 4.104±0.00 N/A N/A 5.046±2.36 2.575±0.00 N/A 1.668±0.00 N/A
ENST00000484158 1.721±0.00 N/A N/A 4.188±0.00 N/A 1.935±0.00 2.079±0.00 1.825±0.00 N/A N/A 1.975±0.00 6.015±0.00 1.421±0.00 N/A
ENST00000610020 0.367±0.00 1.602±0.00 0.243±0.00 0.954±0.07 0.951±0.17 0.463±0.00 0.663±0.28 0.415±0.16 0.685±0.35 0.499±0.06 0.470±0.07 0.842±0.22 0.612±0.36 1.638±0.44
ENSG00000174842 ENST00000370360 1.044±0.00 N/A N/A 1.711±0.00 N/A 1.288±0.00 N/A N/A N/A N/A N/A 2.227±0.28 1.157±0.05 3.272±0.00
ENST00000463560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.954±0.00 14.560±0.00
ENST00000471465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495106 N/A N/A N/A N/A N/A N/A 2.067±0.00 1.210±0.00 N/A N/A N/A 3.432±0.00 1.833±0.00 N/A
ENST00000495852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000203910 ENST00000370373 N/A 0.098±0.00 N/A 0.023±0.00 0.011±0.00 N/A 0.010±0.00 N/A N/A 0.028±0.00 N/A 0.021±0.01 N/A 0.366±0.00
ENST00000370375 N/A 0.051±0.00 N/A 0.057±0.00 N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A 1.737±1.29
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029276 ENSMUST00000078021 N/A N/A 3.768±0.55 6.825±0.00 N/A N/A N/A N/A 3.385±1.01 N/A 1.921±0.24 4.594±0.63 5.436±1.40 N/A
ENSMUST00000082121 N/A N/A N/A N/A 1.695±0.00 N/A 1.056±0.13 N/A N/A N/A 1.561±0.00 N/A 4.274±1.38 7.676±0.00
ENSMUST00000100949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.713±0.00 4.243±0.00 N/A
ENSMUST00000124140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033773 ENSMUST00000065422 1.888±0.64 N/A 5.495±0.46 N/A 2.072±0.00 N/A 1.222±0.26 0.762±0.00 2.520±0.65 1.287±0.31 3.084±0.37 4.962±3.50 5.581±1.25 15.538±0.00
ENSMUST00000112650 1.027±0.16 0.715±0.22 N/A N/A 0.824±0.00 1.063±0.15 N/A N/A 0.469±0.00 0.632±0.10 N/A 1.214±0.29 N/A N/A
ENSMUST00000112651 1.284±0.19 1.717±0.55 N/A N/A 0.872±0.00 2.030±0.49 N/A 1.503±0.39 1.158±0.37 0.959±0.08 N/A 1.394±0.34 N/A 8.228±1.02
ENSMUST00000112654 N/A N/A N/A N/A N/A 1.116±0.00 0.638±0.00 0.593±0.06 0.931±0.35 0.931±0.00 2.064±0.20 N/A N/A N/A
ENSMUST00000112655 N/A N/A N/A N/A N/A N/A N/A N/A 0.393±0.04 N/A N/A N/A N/A N/A
ENSMUST00000129483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147284 N/A 5.012±0.61 N/A N/A N/A N/A N/A N/A 3.672±0.00 N/A N/A N/A N/A N/A
ENSMUST00000150074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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