C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007CB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015862-ENSDARG00000061362 CGP 7955 6:28800390-28857259
GeneTranscriptPositionBiotype
ENSDARG00000015862 (rpl5b)
ribosomal protein L5b
ENSDART00000127695 (rpl5b-001) 28800390-28811189 protein_coding
ENSDARG00000061362 (FAM69A (1 of 2))
family with sequence similarity 69, member A
ENSDART00000087440 (FAM69A (1 of 2)-001) 28816738-28857259 protein_coding
ENSDARG00000082607 (SNORD21)
Small nucleolar RNA SNORD21
ENSDART00000116431 (SNORD21.1-201) 28803355-28803444 snoRNA
ENSDARG00000082960 (SNORD21)
Small nucleolar RNA SNORD21
ENSDART00000116469 (SNORD21.2-201) 28810645-28810741 snoRNA
CIL_0007CB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000122406-ENSG00000154511 CGP 9606 1:92832025-92961522
GeneTranscriptPositionBiotype
ENSG00000207022 (SNORA51)
Small nucleolar RNA SNORA51
ENST00000384295 (SNORA51.1-209) 92846059-92846182 snoRNA
ENSG00000207523 (SNORA66)
small nucleolar RNA, H/ACA box 66
ENST00000384792 (SNORA66-201) 92840719-92840851 snoRNA
ENSG00000229052 (RP11-386I23.1)
ENST00000418249 (RP11-386I23.1-001) 92931345-92932091 transcribed_processed_pseudogene
ENST00000602631 (RP11-386I23.1-002) 92930696-92934098 processed_transcript
CIL_0007CB_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000058558-ENSMUSG00000029270 CGP 10090 5:107900502-107987085
GeneTranscriptPositionBiotype
ENSMUSG00000029270 (Fam69a)
family with sequence similarity 69, member A
ENSMUST00000031198 (Fam69a-001) 107908053-107987085 protein_coding
ENSMUST00000145239 (Fam69a-002) 107909703-107987033 protein_coding
ENSMUST00000153172 (Fam69a-003) 107914398-107972998 protein_coding
ENSMUSG00000058558 (Rpl5)
ribosomal protein L5
ENSMUST00000082223 (Rpl5-001) 107900502-107909005 protein_coding
ENSMUST00000123183 (Rpl5-003) 107900572-107904123 retained_intron
ENSMUST00000129944 (Rpl5-004) 107902121-107903885 retained_intron
ENSMUST00000140659 (Rpl5-005) 107904114-107908050 retained_intron
ENSMUST00000151767 (Rpl5-006) 107906622-107908055 retained_intron
ENSMUST00000153590 (Rpl5-002) 107900874-107904828 protein_coding
ENSMUSG00000077222 (Gm22270)
predicted gene, 22270
ENSMUST00000104034 (Gm22270-201) 107905177-107905308 snoRNA
ENSMUSG00000077426 (Gm26387)
predicted gene, 26387
ENSMUST00000104238 (Gm26387-201) 107907345-107907476 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007CB_0001ENSDARG00000015862ENSDART00000127695ENSDARG00000061362ENSDART00000087440ENSDARG00000082607ENSDART00000116431ENSDARG00000082960ENSDART00000116469CIL_0007CB_0002ENSG00000207022ENST00000384295ENSG00000207523ENST00000384792ENSG00000229052ENST00000418249ENST00000602631CIL_0007CB_0003ENSMUSG00000029270ENSMUST00000031198ENSMUST00000145239ENSMUST00000153172ENSMUSG00000058558ENSMUST00000082223ENSMUST00000123183ENSMUST00000129944ENSMUST00000140659ENSMUST00000151767ENSMUST00000153590ENSMUSG00000077222ENSMUST00000104034ENSMUSG00000077426ENSMUST00000104238
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007CB_0001ENSDARG00000015862ENSDART00000127695ENSDARG00000061362ENSDART00000087440ENSDARG00000082607ENSDART00000116431ENSDARG00000082960ENSDART00000116469CIL_0007CB_0002ENSG00000207022ENST00000384295ENSG00000207523ENST00000384792ENSG00000229052ENST00000418249ENST00000602631CIL_0007CB_0003ENSMUSG00000029270ENSMUST00000031198ENSMUSG00000058558ENSMUST00000082223ENSMUST00000123183ENSMUST00000140659ENSMUST00000153590ENSMUSG00000077222ENSMUST00000104034ENSMUSG00000077426ENSMUST00000104238
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015862 ENSDART00000127695 N/A N/A N/A 88.449±83.88 N/A N/A 659.561±470.79 236.928±331.22 663.401±0.00 N/A 469.816±0.00 N/A N/A N/A
ENSDARG00000061362 ENSDART00000087440 N/A N/A N/A 2.688±1.63 N/A N/A 0.038±0.00 0.214±0.00 0.056±0.00 N/A 0.285±0.00 N/A N/A N/A
ENSDARG00000082607 ENSDART00000116431 N/A N/A N/A N/A N/A N/A N/A N/A 2.299±0.00 N/A N/A N/A N/A N/A
ENSDARG00000082960 ENSDART00000116469 N/A N/A N/A N/A N/A N/A 201.095±188.55 N/A 93.007±0.00 N/A 26.505±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000207022 ENST00000384295 N/A 0.160±0.00 N/A 0.168±0.00 N/A N/A N/A N/A N/A N/A 0.873±0.00 N/A N/A N/A
ENSG00000207523 ENST00000384792 0.289±0.00 2.294±0.00 N/A 0.929±0.00 1.678±0.00 N/A 0.995±0.00 2.001±0.00 6.653±6.51 0.775±0.00 0.564±0.00 5.059±0.00 2.329±0.00 1.135±0.10
ENSG00000229052 ENST00000418249 N/A N/A N/A N/A 0.103±0.00 0.185±0.00 N/A N/A N/A N/A 0.026±0.00 0.048±0.01 N/A 0.079±0.02
ENST00000602631 0.075±0.00 0.302±0.00 N/A N/A 0.023±0.00 0.191±0.00 0.051±0.00 0.037±0.00 0.005±0.00 0.054±0.00 0.005±0.00 0.028±0.01 0.015±0.00 0.045±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029270 ENSMUST00000031198 4.951±0.05 N/A N/A 11.414±1.64 9.684±0.00 N/A N/A 9.145±0.63 N/A N/A 10.586±1.28 N/A 20.125±0.18 N/A
ENSMUST00000145239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000058558 ENSMUST00000082223 22.902±16.46 5.601±2.22 122.274±59.51 69.782±0.00 37.206±6.34 33.982±7.28 23.530±0.90 36.423±5.89 54.462±35.02 35.945±0.00 20.893±10.96 71.130±54.96 120.578±52.52 N/A
ENSMUST00000123183 104.773±63.68 26.424±7.14 384.327±28.33 87.221±18.56 82.680±22.85 137.177±41.23 58.187±4.72 103.752±13.21 107.832±77.14 122.046±12.63 35.345±5.29 142.295±76.12 309.440±125.47 44.907±9.36
ENSMUST00000129944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 53.845±0.00 N/A 6.773±0.00
ENSMUST00000151767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153590 52.483±20.10 27.711±10.18 N/A 79.422±17.09 76.611±58.98 55.842±18.91 28.517±2.44 50.435±5.32 30.962±5.56 36.851±0.00 67.608±0.00 169.546±131.52 299.179±187.71 78.373±0.00
ENSMUSG00000077222 ENSMUST00000104034 N/A N/A 23.059±11.29 35.386±19.23 865.477±82.98 N/A 780.324±38.84 N/A 120.875±116.91 N/A 6.819±1.65 100.834±61.42 43.323±36.53 869.166±0.00
ENSMUSG00000077426 ENSMUST00000104238 N/A N/A 33.819±0.00 14.245±2.53 3258.280±0.00 N/A N/A N/A 36.792±25.75 N/A 2.421±0.33 8.576±2.73 18.911±9.00 745.206±0.00

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