C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007DS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196504-ENSG00000177917 CGP 9606 2:152651593-152761253
GeneTranscriptPositionBiotype
ENSG00000177917 (ARL6IP6)
ADP-ribosylation factor-like 6 interacting protein 6 		ENST00000326446 (ARL6IP6-001) 152717914-152761253 protein_coding
ENST00000425034 (ARL6IP6-004) 152718959-152759851 nonsense_mediated_decay
ENST00000455875 (ARL6IP6-003) 152718919-152759882 nonsense_mediated_decay
ENST00000463690 (ARL6IP6-005) 152720167-152760595 processed_transcript
ENST00000495469 (ARL6IP6-002) 152717893-152760764 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0007DS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061136-ENSMUSG00000026960 CGP 10090 2:53134704-53219220
GeneTranscriptPositionBiotype
ENSMUSG00000026960 (Arl6ip6)
ADP-ribosylation factor-like 6 interacting protein 6 		ENSMUST00000028336 (Arl6ip6-001) 53192088-53219220 protein_coding
ENSMUST00000155517 (Arl6ip6-002) 53191726-53217534 processed_transcript
ENSMUSG00000061136 (Prpf40a)
PRP40 pre-mRNA processing factor 40 homolog A (yeast) 		ENSMUST00000076313 (Prpf40a-001) 53134704-53191225 protein_coding
ENSMUST00000125243 (Prpf40a-002) 53153044-53191284 protein_coding
ENSMUST00000132031 (Prpf40a-004) 53176168-53191225 processed_transcript
ENSMUST00000133384 (Prpf40a-005) 53139172-53145309 processed_transcript
ENSMUST00000152922 (Prpf40a-003) 53172394-53191204 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DS_0001ENSG00000177917ENST00000326446ENST00000425034ENST00000455875ENST00000463690ENST00000495469CIL_0007DS_0002ENSMUSG00000026960ENSMUST00000028336ENSMUST00000155517ENSMUSG00000061136ENSMUST00000076313ENSMUST00000125243ENSMUST00000132031ENSMUST00000133384ENSMUST00000152922
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DS_0001ENSG00000177917ENST00000326446ENST00000495469CIL_0007DS_0002ENSMUSG00000026960ENSMUST00000028336ENSMUST00000155517ENSMUSG00000061136ENSMUST00000076313ENSMUST00000125243ENSMUST00000132031ENSMUST00000133384
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000177917 ENST00000326446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.137±0.47 N/A
ENST00000425034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495469 N/A N/A N/A N/A 5.141±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026960 ENSMUST00000028336 2.417±0.73 12.496±2.90 3.956±0.26 7.649±5.44 4.718±3.24 6.447±1.60 1.820±0.70 2.048±0.75 9.153±7.83 4.516±1.24 1.363±0.56 9.509±5.04 5.884±3.47 10.871±7.75
ENSMUST00000155517 3.491±0.71 N/A 4.413±0.28 1.166±0.00 3.139±1.18 N/A 3.523±0.62 3.345±0.21 1.865±0.01 4.008±0.00 2.519±0.28 11.579±4.27 7.460±3.26 35.019±14.39
ENSMUSG00000061136 ENSMUST00000076313 1.579±0.43 N/A 5.087±0.04 8.412±3.75 1.338±0.21 1.110±0.20 0.940±0.15 1.072±0.41 4.162±3.53 1.651±0.26 2.474±0.38 9.630±0.72 6.310±1.37 2.289±0.43
ENSMUST00000125243 7.645±1.91 14.047±2.83 N/A 5.855±0.00 9.654±0.71 7.547±1.95 3.484±0.35 4.708±0.93 5.467±0.90 8.458±0.91 N/A 21.195±4.91 10.760±4.26 18.754±2.62
ENSMUST00000132031 4.504±1.08 9.954±1.95 N/A N/A 7.390±1.24 7.684±1.34 N/A 3.123±0.65 2.658±0.39 6.040±1.21 N/A 12.283±2.43 N/A N/A
ENSMUST00000133384 N/A N/A N/A 43.993±0.00 N/A N/A N/A N/A N/A N/A N/A 84.613±45.02 93.149±79.95 146.455±0.00
ENSMUST00000152922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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