C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007DV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140694-ENSG00000103429 CGP 9606 16:14435701-14669236
GeneTranscriptPositionBiotype
ENSG00000103429 (BFAR)
bifunctional apoptosis regulator 		ENST00000261658 (BFAR-001) 14632815-14669236 protein_coding
ENST00000562121 (BFAR-014) 14632943-14655171 processed_transcript
ENST00000562442 (BFAR-002) 14632932-14650589 protein_coding
ENST00000562545 (BFAR-006) 14648544-14667837 protein_coding
ENST00000563082 (BFAR-009) 14667320-14669232 processed_transcript
ENST00000563313 (BFAR-008) 14632974-14665019 nonsense_mediated_decay
ENST00000563971 (BFAR-004) 14632931-14668350 protein_coding
ENST00000564078 (BFAR-010) 14661964-14665181 protein_coding
ENST00000565478 (BFAR-011) 14662030-14669231 protein_coding
ENST00000566520 (BFAR-003) 14632931-14650556 retained_intron
ENST00000566710 (BFAR-007) 14644288-14668068 nonsense_mediated_decay
ENST00000570219 (BFAR-012) 14633163-14648452 protein_coding
ENSG00000140694 (PARN)
poly(A)-specific ribonuclease 		ENST00000341484 (PARN-002) 14436605-14630276 protein_coding
ENST00000420015 (PARN-003) 14436273-14630259 protein_coding
ENST00000437198 (PARN-001) 14435701-14630267 protein_coding
ENST00000538472 (PARN-005) 14599935-14630218 nonsense_mediated_decay
ENST00000539279 (PARN-004) 14436668-14630238 protein_coding
ENST00000562715 (PARN-012) 14576072-14584791 processed_transcript
ENST00000562896 (PARN-006) 14627176-14632728 protein_coding
ENST00000563155 (PARN-009) 14608107-14610699 retained_intron
ENST00000563641 (PARN-007) 14586318-14630260 nonsense_mediated_decay
ENST00000563697 (PARN-013) 14555686-14584760 processed_transcript
ENST00000564113 (PARN-011) 14555654-14592077 processed_transcript
ENST00000564882 (PARN-014) 14446957-14501689 processed_transcript
ENST00000564904 (PARN-015) 14482638-14565075 processed_transcript
ENST00000566021 (PARN-008) 14610665-14630251 processed_transcript
ENST00000569444 (PARN-010) 14555654-14610743 protein_coding
ENSG00000242430 (RN7SL274P)
RNA, 7SL, cytoplasmic 274, pseudogene 		ENST00000492268 (RN7SL274P-201) 14601823-14602094 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0007DV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022685-ENSMUSG00000022684 CGP 10090 16:13537964-13703612
GeneTranscriptPositionBiotype
ENSMUSG00000022684 (Bfar)
bifunctional apoptosis regulator 		ENSMUST00000023365 (Bfar-001) 13671858-13703612 protein_coding
ENSMUST00000069281 (Bfar-002) 13672020-13703602 protein_coding
ENSMUST00000127973 (Bfar-003) 13671950-13699289 nonsense_mediated_decay
ENSMUST00000132349 (Bfar-008) 13672062-13685616 retained_intron
ENSMUST00000144804 (Bfar-007) 13684891-13687541 retained_intron
ENSMUST00000148079 (Bfar-006) 13685231-13687972 retained_intron
ENSMUST00000154568 (Bfar-005) 13691965-13697506 retained_intron
ENSMUSG00000022685 (Parn)
poly(A)-specific ribonuclease (deadenylation nuclease) 		ENSMUST00000058884 (Parn-201) 13537964-13668170 protein_coding
ENSMUSG00000079737 (3110001I22Rik)
RIKEN cDNA 3110001I22 gene 		ENSMUST00000035426 (3110001I22Rik-001) 13671929-13678405 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DV_0001ENSG00000103429ENST00000261658ENST00000562121ENST00000562442ENST00000562545ENST00000563082ENST00000563313ENST00000563971ENST00000564078ENST00000565478ENST00000566520ENST00000566710ENST00000570219ENSG00000140694ENST00000341484ENST00000420015ENST00000437198ENST00000538472ENST00000539279ENST00000562715ENST00000562896ENST00000563155ENST00000563641ENST00000563697ENST00000564113ENST00000564882ENST00000564904ENST00000566021ENST00000569444ENSG00000242430ENST00000492268CIL_0007DV_0002ENSMUSG00000022684ENSMUST00000023365ENSMUST00000069281ENSMUST00000127973ENSMUST00000132349ENSMUST00000144804ENSMUST00000148079ENSMUST00000154568ENSMUSG00000022685ENSMUST00000058884ENSMUSG00000079737ENSMUST00000035426
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DV_0001ENSG00000103429ENST00000261658ENST00000562121ENST00000562442ENST00000562545ENST00000563971ENST00000566520ENSG00000140694ENST00000341484ENST00000420015ENST00000437198ENST00000539279ENST00000563641ENST00000564904ENST00000566021ENST00000569444ENSG00000242430ENST00000492268CIL_0007DV_0002ENSMUSG00000022684ENSMUST00000023365ENSMUST00000069281ENSMUST00000127973ENSMUSG00000022685ENSMUST00000058884ENSMUSG00000079737ENSMUST00000035426
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103429 ENST00000261658 7.849±0.00 6.911±0.00 2.057±0.00 2.489±0.19 5.785±1.53 8.065±5.50 3.660±2.47 7.065±2.99 3.281±0.75 6.359±3.44 6.336±3.25 6.158±3.26 12.573±1.54 9.164±2.56
ENST00000562121 N/A N/A 2.847±0.00 N/A 3.493±0.00 4.237±0.00 N/A N/A 3.789±0.00 N/A N/A N/A N/A N/A
ENST00000562442 7.911±0.00 8.109±0.00 N/A 4.022±3.02 3.628±1.23 N/A 2.091±1.55 5.458±0.00 N/A 10.811±0.00 2.744±0.00 5.122±2.19 8.811±1.11 N/A
ENST00000562545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.976±0.00 N/A N/A N/A
ENST00000563082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.092±0.00 5.778±0.00
ENST00000564078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566520 5.849±0.00 3.988±0.00 0.722±0.00 N/A 4.245±0.00 1.728±0.00 N/A N/A 2.710±0.00 N/A N/A N/A N/A N/A
ENST00000566710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000140694 ENST00000341484 N/A 2.386±0.00 0.775±0.00 5.876±0.00 6.064±0.00 4.498±0.00 2.085±0.00 N/A 5.105±0.00 2.207±0.00 0.339±0.00 3.433±0.00 N/A N/A
ENST00000420015 1.240±0.00 N/A N/A N/A 2.350±0.00 1.519±0.00 N/A 1.026±0.00 N/A N/A N/A N/A N/A N/A
ENST00000437198 N/A N/A N/A 1.997±0.00 1.793±0.35 1.083±0.00 1.101±0.00 2.595±1.30 1.416±0.42 1.606±0.93 4.377±0.00 7.406±3.68 6.522±0.89 9.875±3.87
ENST00000538472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539279 1.820±0.00 N/A N/A 3.674±0.00 N/A N/A N/A 1.597±0.00 N/A N/A N/A N/A N/A N/A
ENST00000562715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563641 N/A N/A N/A N/A 4.110±0.00 N/A N/A N/A N/A N/A N/A 10.177±0.00 18.904±0.00 21.331±0.00
ENST00000563697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.759±0.00 N/A
ENST00000566021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.044±0.00 N/A N/A N/A
ENST00000569444 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.279±0.00 N/A 4.959±0.00 N/A N/A
ENSG00000242430 ENST00000492268 0.194±0.00 0.202±0.00 N/A 0.359±0.00 0.230±0.03 0.062±0.00 0.180±0.00 0.273±0.00 N/A 0.121±0.00 0.344±0.00 0.506±0.00 0.133±0.00 0.467±0.20
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022684 ENSMUST00000023365 13.440±2.20 6.913±2.50 18.287±3.53 11.769±1.79 6.710±2.89 15.298±2.85 13.712±1.55 9.051±1.37 11.685±2.36 7.273±0.53 13.275±0.78 8.901±3.09 12.566±2.37 4.300±0.79
ENSMUST00000069281 6.650±0.61 5.639±1.68 4.408±0.00 5.167±0.00 7.444±2.12 4.106±0.32 3.719±1.14 5.369±1.31 3.847±1.18 3.637±0.58 N/A 7.761±2.08 5.076±2.19 1.469±0.00
ENSMUST00000127973 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.136±0.08 N/A 3.070±0.00 N/A 2.506±0.10
ENSMUST00000132349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022685 ENSMUST00000058884 7.137±1.19 7.347±2.08 10.468±0.37 8.015±1.38 6.522±2.91 3.519±0.87 2.851±0.31 5.166±2.10 6.184±0.99 6.623±0.33 2.228±0.25 10.568±5.77 13.076±3.81 4.291±0.66
ENSMUSG00000079737 ENSMUST00000035426 N/A N/A N/A N/A N/A N/A N/A N/A 2.155±0.00 N/A N/A N/A N/A N/A

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