C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007EH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177692-ENSG00000159131 CGP 9606 21:33485530-33543491
GeneTranscriptPositionBiotype
ENSG00000159140 (SON)
SON DNA binding protein 		ENST00000300278 (SON-003) 33543064-33560667 protein_coding
ENST00000356577 (SON-001) 33542618-33577481 protein_coding
ENST00000381679 (SON-006) 33543065-33559056 protein_coding
ENST00000381692 (SON-002) 33543052-33577481 protein_coding
ENST00000421541 (SON-008) 33555049-33567467 protein_coding
ENST00000429093 (SON-023) 33567160-33570198 nonsense_mediated_decay
ENST00000436227 (SON-007) 33552248-33577481 protein_coding
ENST00000455528 (SON-004) 33543064-33577481 nonsense_mediated_decay
ENST00000457208 (SON-013) 33567185-33576513 nonsense_mediated_decay
ENST00000465834 (SON-014) 33572527-33576881 retained_intron
ENST00000467616 (SON-019) 33569776-33576484 processed_transcript
ENST00000470533 (SON-022) 33571869-33576764 processed_transcript
ENST00000473102 (SON-018) 33571735-33576469 processed_transcript
ENST00000474355 (SON-012) 33567179-33569283 retained_intron
ENST00000475072 (SON-010) 33543052-33546752 retained_intron
ENST00000477419 (SON-015) 33573025-33576516 retained_intron
ENST00000478183 (SON-009) 33572213-33577481 retained_intron
ENST00000484294 (SON-017) 33571735-33576447 processed_transcript
ENST00000491794 (SON-016) 33573214-33576982 retained_intron
ENST00000492229 (SON-011) 33543070-33547039 processed_transcript
ENSG00000177692 (DNAJC28)
DnaJ (Hsp40) homolog, subfamily C, member 28 		ENST00000314399 (DNAJC28-001) 33488208-33491473 protein_coding
ENST00000381947 (DNAJC28-002) 33488190-33491720 protein_coding
ENST00000402202 (DNAJC28-004) 33488219-33491691 protein_coding
ENST00000617313 (DNAJC28-201) 33485530-33491473 protein_coding
ENSG00000233956 (BTF3P6)
basic transcription factor 3 pseudogene 6 		ENST00000448054 (BTF3P6-001) 33518610-33519108 processed_pseudogene
CIL_0007EH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039763-ENSMUSG00000022962 CGP 10090 16:91614257-91646952
GeneTranscriptPositionBiotype
ENSMUSG00000022962 (Gart)
phosphoribosylglycinamide formyltransferase 		ENSMUST00000023684 (Gart-001) 91621186-91646952 protein_coding
ENSMUST00000120450 (Gart-002) 91633405-91646935 protein_coding
ENSMUST00000156713 (Gart-003) 91621393-91643146 nonsense_mediated_decay
ENSMUSG00000039763 (Dnajc28)
DnaJ (Hsp40) homolog, subfamily C, member 28 		ENSMUST00000049244 (Dnajc28-001) 91615726-91618994 protein_coding
ENSMUST00000133731 (Dnajc28-003) 91617102-91619026 protein_coding
ENSMUST00000143058 (Dnajc28-002) 91616837-91618991 protein_coding
ENSMUST00000169982 (Dnajc28-201) 91614257-91618999 protein_coding
ENSMUSG00000085337 (Gm15964)
predicted gene 15964 		ENSMUST00000138207 (Gm15964-001) 91611468-91623861 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007EH_0001ENSG00000159140ENST00000300278ENST00000356577ENST00000381679ENST00000381692ENST00000421541ENST00000429093ENST00000436227ENST00000455528ENST00000457208ENST00000465834ENST00000467616ENST00000470533ENST00000473102ENST00000474355ENST00000475072ENST00000477419ENST00000478183ENST00000484294ENST00000491794ENST00000492229ENSG00000177692ENST00000314399ENST00000381947ENST00000402202ENST00000617313ENSG00000233956ENST00000448054CIL_0007EH_0002ENSMUSG00000022962ENSMUST00000023684ENSMUST00000120450ENSMUST00000156713ENSMUSG00000039763ENSMUST00000049244ENSMUST00000133731ENSMUST00000143058ENSMUST00000169982ENSMUSG00000085337ENSMUST00000138207
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007EH_0001ENSG00000159140ENST00000300278ENST00000356577ENST00000381679ENST00000381692ENST00000436227ENST00000455528ENSG00000177692ENST00000314399ENST00000381947ENST00000402202ENST00000617313ENSG00000233956ENST00000448054CIL_0007EH_0002ENSMUSG00000022962ENSMUST00000023684ENSMUST00000120450ENSMUST00000156713ENSMUSG00000039763ENSMUST00000049244ENSMUST00000143058ENSMUST00000169982ENSMUSG00000085337ENSMUST00000138207
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000159140 ENST00000300278 N/A 9.608±0.00 4.585±0.00 N/A N/A 6.223±0.00 N/A N/A 6.771±0.00 6.432±0.00 4.675±0.00 N/A N/A 18.828±0.00
ENST00000356577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.792±2.64 N/A N/A
ENST00000381679 15.932±0.00 14.515±0.00 3.790±0.00 8.263±4.41 12.331±0.00 8.185±1.22 N/A 5.941±0.00 5.852±0.63 7.959±0.65 6.417±3.11 12.199±3.30 13.942±6.66 15.921±0.72
ENST00000381692 N/A 26.314±0.00 N/A 25.762±0.00 28.591±0.00 23.179±0.00 N/A N/A N/A 16.209±0.00 N/A 27.608±3.47 N/A 43.415±0.00
ENST00000421541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436227 N/A N/A 6.622±0.00 N/A 17.924±0.00 10.568±0.00 N/A 15.925±9.64 6.627±0.62 13.477±3.30 8.699±3.47 19.897±3.89 18.796±10.79 30.590±0.00
ENST00000455528 11.084±0.00 N/A N/A 3.105±0.00 N/A 8.595±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177692 ENST00000314399 N/A N/A 0.939±0.00 0.286±0.00 N/A 0.375±0.00 N/A N/A N/A N/A N/A N/A 0.131±0.00 2.388±0.95
ENST00000381947 N/A N/A 0.264±0.00 1.565±0.00 0.150±0.04 0.281±0.00 1.130±0.16 0.593±0.21 0.540±0.11 0.814±0.00 0.159±0.00 0.120±0.07 0.337±0.00 1.077±0.00
ENST00000402202 0.152±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.290±0.17 0.229±0.09 4.683±0.00
ENST00000617313 N/A 0.306±0.00 N/A 0.304±0.00 0.083±0.00 N/A N/A 0.339±0.00 N/A N/A 0.160±0.13 0.071±0.01 0.016±0.00 0.433±0.00
ENSG00000233956 ENST00000448054 0.024±0.00 0.195±0.00 0.127±0.00 N/A 0.617±0.00 N/A N/A 0.687±0.66 0.520±0.41 0.532±0.28 N/A 0.143±0.02 N/A 0.126±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022962 ENSMUST00000023684 7.558±2.12 2.680±0.86 5.810±1.38 7.021±0.00 4.180±1.34 5.511±1.66 3.600±0.47 4.156±0.97 10.997±12.37 5.010±0.57 4.142±0.85 7.707±2.77 7.932±1.98 3.946±0.78
ENSMUST00000120450 N/A N/A N/A 2.918±0.43 1.860±0.00 N/A 3.148±0.49 N/A 4.644±1.76 2.079±0.00 4.342±0.34 6.686±0.89 4.936±3.17 N/A
ENSMUST00000156713 3.899±1.09 2.285±1.21 3.925±0.07 5.702±3.54 3.047±0.82 1.347±0.04 2.215±0.69 3.493±0.72 4.426±2.80 1.795±0.35 5.632±1.54 7.333±5.85 10.006±9.40 3.820±1.82
ENSMUSG00000039763 ENSMUST00000049244 0.241±0.00 0.628±0.30 0.389±0.00 2.165±1.74 0.620±0.11 0.546±0.12 1.871±0.28 0.887±0.28 0.504±0.24 0.377±0.12 N/A 1.718±2.60 0.504±0.37 4.595±5.40
ENSMUST00000133731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143058 0.455±0.06 0.530±0.02 N/A N/A 0.505±0.22 0.307±0.13 N/A 0.878±0.00 0.414±0.18 0.445±0.11 N/A 0.501±0.11 0.168±0.03 2.445±0.83
ENSMUST00000169982 N/A 0.670±0.27 0.228±0.00 0.516±0.17 0.499±0.00 0.248±0.13 N/A N/A 0.393±0.15 0.212±0.00 1.232±0.21 0.345±0.22 0.082±0.05 0.448±0.00
ENSMUSG00000085337 ENSMUST00000138207 N/A 1.037±0.20 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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