C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007F1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070173-ENSDARG00000052782 CGP 7955 1:20115714-20266484
GeneTranscriptPositionBiotype
ENSDARG00000052782 (glrba)
gylcine receptor, beta a
ENSDART00000102790 (glrba-001) 20205662-20266484 protein_coding
ENSDART00000148863 (glrba-201) 20206147-20261203 protein_coding
ENSDARG00000070173 (gria2a)
glutamate receptor, ionotropic, AMPA 2a
ENSDART00000077805 (gria2a-002) 20115772-20127124 protein_coding
ENSDART00000102782 (gria2a-001) 20115714-20192523 protein_coding
CIL_0007F1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033981-ENSMUSG00000028020 CGP 10090 3:80684936-80913660
GeneTranscriptPositionBiotype
ENSMUSG00000028020 (Glrb)
glycine receptor, beta subunit
ENSMUST00000029654 (Glrb-001) 80843599-80913660 protein_coding
ENSMUST00000107743 (Glrb-003) 80855629-80913528 protein_coding
ENSMUST00000132330 (Glrb-002) 80862110-80913589 nonsense_mediated_decay
ENSMUST00000135043 (Glrb-004) 80843599-80913614 nonsense_mediated_decay
ENSMUSG00000033981 (Gria2)
glutamate receptor, ionotropic, AMPA2 (alpha 2)
ENSMUST00000075316 (Gria2-201) 80684936-80802791 protein_coding
ENSMUST00000107745 (Gria2-202) 80684936-80802791 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007F1_0001ENSDARG00000052782ENSDART00000102790ENSDART00000148863ENSDARG00000070173ENSDART00000077805ENSDART00000102782CIL_0007F1_0002ENSMUSG00000028020ENSMUST00000029654ENSMUST00000107743ENSMUST00000132330ENSMUST00000135043ENSMUSG00000033981ENSMUST00000075316ENSMUST00000107745
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007F1_0001ENSDARG00000052782ENSDART00000102790ENSDART00000148863ENSDARG00000070173ENSDART00000077805ENSDART00000102782CIL_0007F1_0002ENSMUSG00000028020ENSMUST00000029654ENSMUST00000107743ENSMUST00000132330ENSMUST00000135043ENSMUSG00000033981ENSMUST00000075316ENSMUST00000107745
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052782 ENSDART00000102790 N/A N/A N/A 9.107±6.47 N/A N/A N/A 0.236±0.00 0.023±0.00 N/A 0.544±0.00 N/A N/A N/A
ENSDART00000148863 N/A N/A N/A N/A N/A N/A 0.095±0.06 N/A 0.027±0.00 N/A N/A N/A N/A N/A
ENSDARG00000070173 ENSDART00000077805 N/A N/A N/A N/A N/A N/A 0.183±0.12 N/A 0.107±0.00 N/A N/A N/A N/A N/A
ENSDART00000102782 N/A N/A N/A 33.970±30.12 N/A N/A 0.069±0.01 N/A 0.078±0.00 N/A 2.169±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028020 ENSMUST00000029654 2.444±1.64 2.712±0.34 0.396±0.08 4.215±0.18 0.294±0.10 0.431±0.04 N/A 0.188±0.06 0.058±0.02 0.129±0.03 0.013±0.01 0.923±0.54 0.067±0.05 0.072±0.00
ENSMUST00000107743 N/A N/A N/A N/A 0.157±0.00 N/A N/A N/A 0.047±0.00 N/A 0.034±0.01 N/A 0.106±0.08 N/A
ENSMUST00000132330 N/A N/A N/A N/A N/A N/A N/A 0.281±0.00 N/A N/A N/A N/A N/A 0.143±0.00
ENSMUST00000135043 0.440±0.31 N/A N/A N/A 0.308±0.19 0.470±0.00 0.085±0.05 0.087±0.06 0.033±0.01 0.200±0.06 0.019±0.01 1.313±0.57 0.118±0.11 0.066±0.03
ENSMUSG00000033981 ENSMUST00000075316 0.046±0.04 0.473±0.25 0.004±0.00 12.532±4.35 0.022±0.01 0.025±0.01 0.004±0.00 0.025±0.00 0.016±0.01 0.035±0.01 0.002±0.00 0.059±0.03 0.008±0.01 0.009±0.00
ENSMUST00000107745 0.056±0.06 0.763±0.33 0.004±0.00 15.578±9.30 0.023±0.01 0.054±0.06 0.004±0.00 0.033±0.03 0.009±0.01 0.035±0.01 0.002±0.00 0.142±0.14 0.007±0.00 0.009±0.00

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