C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007FI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183287-ENSG00000141682 CGP 9606 18:59430940-59904306
GeneTranscriptPositionBiotype
ENSG00000141682 (PMAIP1)
phorbol-12-myristate-13-acetate-induced protein 1 		ENST00000269518 (PMAIP1-002) 59900016-59903537 protein_coding
ENST00000316660 (PMAIP1-001) 59899948-59904306 protein_coding
ENST00000590596 (PMAIP1-003) 59900036-59902963 retained_intron
ENSG00000183287 (CCBE1)
collagen and calcium binding EGF domains 1 		ENST00000398179 (CCBE1-201) 59430940-59480240 protein_coding
ENST00000439986 (CCBE1-001) 59430940-59697380 protein_coding
ENST00000589116 (CCBE1-002) 59435146-59455212 retained_intron
ENST00000589419 (CCBE1-004) 59448046-59666162 protein_coding
ENSG00000224161 (RPS26P54)
ribosomal protein S26 pseudogene 54 		ENST00000473094 (RPS26P54-001) 59761558-59761905 processed_pseudogene
ENSG00000267000 (RP11-27G24.3)
 ENST00000589242 (RP11-27G24.3-001) 59459072-59465682 antisense
ENSG00000267061 (RP11-760L24.1)
 ENST00000586841 (RP11-760L24.1-001) 59563709-59568615 antisense
ENSG00000267269 (RP11-2N1.1)
 ENST00000588298 (RP11-2N1.1-001) 59685820-59688400 antisense
ENSG00000267486 (GLUD1P4)
glutamate dehydrogenase 1 pseudogene 4 		ENST00000590914 (GLUD1P4-001) 59778572-59778989 processed_pseudogene
ENSG00000267669 (RP11-824M15.3)
 ENST00000588088 (RP11-824M15.3-002) 59821040-59824461 processed_transcript
ENST00000592549 (RP11-824M15.3-001) 59824025-59825261 transcribed_processed_pseudogene
ENSG00000273664 (RP11-2N1.3)
 ENST00000617349 (RP11-2N1.3-001) 59700523-59700946 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0007FI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046318-ENSMUSG00000024521 CGP 10090 18:66045302-66465550
GeneTranscriptPositionBiotype
ENSMUSG00000024521 (Pmaip1)
phorbol-12-myristate-13-acetate-induced protein 1 		ENSMUST00000025399 (Pmaip1-201) 66458604-66465550 protein_coding
ENSMUSG00000046318 (Ccbe1)
collagen and calcium binding EGF domains 1 		ENSMUST00000061103 (Ccbe1-005) 66056855-66291788 nonsense_mediated_decay
ENSMUST00000130300 (Ccbe1-001) 66060967-66291838 protein_coding
ENSMUST00000146610 (Ccbe1-003) 66045302-66291446 processed_transcript
ENSMUST00000151343 (Ccbe1-002) 66269028-66302739 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007FI_0001ENSG00000141682ENST00000269518ENST00000316660ENST00000590596ENSG00000183287ENST00000398179ENST00000439986ENST00000589116ENST00000589419ENSG00000224161ENST00000473094ENSG00000267000ENST00000589242ENSG00000267061ENST00000586841ENSG00000267269ENST00000588298ENSG00000267486ENST00000590914ENSG00000267669ENST00000588088ENST00000592549ENSG00000273664ENST00000617349CIL_0007FI_0002ENSMUSG00000024521ENSMUST00000025399ENSMUSG00000046318ENSMUST00000061103ENSMUST00000130300ENSMUST00000146610ENSMUST00000151343
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007FI_0001ENSG00000141682ENST00000269518ENST00000316660ENST00000590596ENSG00000183287ENST00000398179ENST00000439986ENST00000589116ENST00000589419ENSG00000224161ENST00000473094ENSG00000267000ENST00000589242ENSG00000267061ENST00000586841ENSG00000267269ENST00000588298ENSG00000267486ENST00000590914ENSG00000267669ENST00000588088ENST00000592549ENSG00000273664ENST00000617349CIL_0007FI_0002ENSMUSG00000024521ENSMUST00000025399ENSMUSG00000046318ENSMUST00000061103ENSMUST00000130300
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141682 ENST00000269518 0.228±0.00 0.792±0.00 0.221±0.00 0.214±0.00 0.235±0.00 0.196±0.06 0.117±0.05 0.043±0.00 N/A 2.050±0.00 N/A 1.161±0.88 2.660±0.00 1.155±0.00
ENST00000316660 0.253±0.00 1.973±0.00 N/A 0.433±0.28 0.639±0.23 0.219±0.17 0.031±0.00 0.390±0.00 0.234±0.01 2.189±1.68 0.231±0.00 2.119±1.21 4.218±1.43 2.091±1.42
ENST00000590596 N/A N/A N/A N/A N/A 0.463±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183287 ENST00000398179 N/A N/A N/A 0.577±0.00 0.349±0.00 1.858±0.00 0.429±0.00 0.731±0.00 0.337±0.00 N/A 0.022±0.00 N/A 0.017±0.00 0.466±0.00
ENST00000439986 2.510±0.00 0.332±0.00 0.154±0.00 0.086±0.04 0.299±0.07 2.353±1.79 0.105±0.00 0.343±0.26 0.306±0.01 3.034±1.66 0.232±0.00 4.717±2.52 N/A 0.230±0.07
ENST00000589116 N/A N/A 0.715±0.00 0.303±0.00 N/A N/A 0.260±0.00 0.428±0.00 N/A N/A 0.547±0.00 N/A 0.010±0.00 N/A
ENST00000589419 N/A N/A 3.045±0.00 0.918±0.00 1.775±0.00 N/A N/A 3.868±0.00 N/A 8.869±0.00 N/A 7.895±0.00 N/A N/A
ENSG00000224161 ENST00000473094 N/A N/A N/A N/A 0.107±0.00 N/A N/A N/A N/A 0.049±0.00 N/A N/A N/A N/A
ENSG00000267000 ENST00000589242 N/A 0.281±0.00 N/A 0.058±0.00 0.115±0.03 0.410±0.00 N/A 0.197±0.17 N/A 0.123±0.00 N/A N/A 0.176±0.00 0.251±0.00
ENSG00000267061 ENST00000586841 0.146±0.00 N/A N/A N/A 0.459±0.00 N/A N/A N/A 0.184±0.00 0.163±0.00 N/A 0.477±0.00 N/A 0.726±0.45
ENSG00000267269 ENST00000588298 0.178±0.00 0.045±0.00 N/A 0.023±0.00 N/A N/A N/A N/A 0.038±0.00 N/A N/A 0.056±0.00 N/A 0.531±0.06
ENSG00000267486 ENST00000590914 0.029±0.00 N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267669 ENST00000588088 N/A 0.055±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00
ENST00000592549 0.120±0.00 0.045±0.00 N/A N/A 0.038±0.00 0.017±0.00 0.032±0.00 0.037±0.00 0.016±0.00 0.069±0.00 0.031±0.00 N/A 0.054±0.00 N/A
ENSG00000273664 ENST00000617349 0.095±0.00 N/A N/A N/A 0.030±0.00 0.976±0.92 N/A N/A 0.058±0.00 0.113±0.00 N/A 0.917±0.11 N/A 0.068±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024521 ENSMUST00000025399 1.200±0.94 0.311±0.16 1.983±0.21 0.479±0.28 1.882±1.28 7.431±2.34 0.075±0.03 3.715±0.56 0.498±0.41 3.062±0.14 0.068±0.08 0.703±0.30 4.516±2.28 0.540±0.19
ENSMUSG00000046318 ENSMUST00000061103 0.208±0.09 6.589±1.62 0.138±0.00 0.215±0.12 0.574±0.36 0.260±0.13 0.617±0.08 0.516±0.16 0.492±0.24 0.805±0.22 0.172±0.09 18.725±7.80 0.347±0.10 0.927±0.49
ENSMUST00000130300 0.184±0.00 9.779±0.00 N/A N/A 0.666±0.39 0.603±0.10 N/A 0.800±0.00 0.510±0.15 1.467±0.27 0.077±0.00 N/A N/A 2.666±0.81
ENSMUST00000146610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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