C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007FO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144524-ENSG00000163273 CGP 9606 2:231781671-231926403
GeneTranscriptPositionBiotype
ENSG00000144524 (COPS7B)
COP9 signalosome subunit 7B 		ENST00000350033 (COPS7B-001) 231786414-231809253 protein_coding
ENST00000357490 (COPS7B-011) 231786436-231791762 nonsense_mediated_decay
ENST00000373608 (COPS7B-002) 231786448-231809253 protein_coding
ENST00000409091 (COPS7B-023) 231781685-231807695 protein_coding
ENST00000409295 (COPS7B-006) 231781678-231807815 protein_coding
ENST00000410017 (COPS7B-014) 231786445-231808723 protein_coding
ENST00000410024 (COPS7B-015) 231781671-231807724 protein_coding
ENST00000412591 (COPS7B-009) 231786434-231798943 protein_coding
ENST00000412922 (COPS7B-005) 231786445-231808764 nonsense_mediated_decay
ENST00000413197 (COPS7B-003) 231786434-231809247 nonsense_mediated_decay
ENST00000432387 (COPS7B-012) 231786436-231791808 nonsense_mediated_decay
ENST00000436564 (COPS7B-020) 231788689-231796145 nonsense_mediated_decay
ENST00000449174 (COPS7B-022) 231796187-231808724 protein_coding
ENST00000449784 (COPS7B-017) 231781707-231796311 nonsense_mediated_decay
ENST00000450501 (COPS7B-010) 231786435-231791786 nonsense_mediated_decay
ENST00000452375 (COPS7B-018) 231781707-231791169 nonsense_mediated_decay
ENST00000461350 (COPS7B-007) 231789654-231808723 retained_intron
ENST00000466901 (COPS7B-019) 231781708-231791976 retained_intron
ENST00000474042 (COPS7B-021) 231791604-231807797 retained_intron
ENST00000479430 (COPS7B-016) 231781707-231788927 retained_intron
ENST00000488111 (COPS7B-008) 231793516-231808722 retained_intron
ENST00000492423 (COPS7B-013) 231786445-231789149 retained_intron
ENST00000611614 (COPS7B-201) 231781671-231809254 protein_coding
ENST00000620578 (COPS7B-202) 231786383-231809254 protein_coding
ENSG00000156973 (PDE6D)
phosphodiesterase 6D, cGMP-specific, rod, delta 		ENST00000287600 (PDE6D-001) 231732425-231781309 protein_coding
ENST00000409772 (PDE6D-005) 231732804-231781291 protein_coding
ENST00000428104 (PDE6D-004) 231737187-231786272 protein_coding
ENST00000477748 (PDE6D-002) 231778723-231781282 processed_transcript
ENST00000486044 (PDE6D-006) 231737422-231781263 retained_intron
ENSG00000163273 (NPPC)
natriuretic peptide C 		ENST00000295440 (NPPC-001) 231925385-231926328 protein_coding
ENST00000409852 (NPPC-002) 231921820-231926403 protein_coding
ENSG00000260622 (RP11-690I21.3)
 ENST00000569668 (RP11-690I21.3-001) 231810348-231810844 processed_pseudogene
ENSG00000261096 (RP11-690I21.2)
 ENST00000563949 (RP11-690I21.2-001) 231809846-231812352 sense_overlapping
CIL_0007FO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026240-ENSMUSG00000026241 CGP 10090 1:86582904-86670571
GeneTranscriptPositionBiotype
ENSMUSG00000026240 (Cops7b)
COP9 (constitutive photomorphogenic) homolog, subunit 7b (Arabidopsis thaliana) 		ENSMUST00000027446 (Cops7b-201) 86587100-86606500 protein_coding
ENSMUST00000121534 (Cops7b-001) 86582904-86609375 protein_coding
ENSMUST00000122884 (Cops7b-002) 86587142-86606978 nonsense_mediated_decay
ENSMUST00000127219 (Cops7b-004) 86596740-86601164 processed_transcript
ENSMUST00000138280 (Cops7b-003) 86587131-86606326 nonsense_mediated_decay
ENSMUST00000149542 (Cops7b-005) 86582938-86589293 protein_coding
ENSMUSG00000026241 (Nppc)
natriuretic peptide type C 		ENSMUST00000027449 (Nppc-001) 86666291-86670571 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007FO_0001ENSG00000144524ENST00000350033ENST00000410017ENST00000410024ENST00000412922ENST00000413197ENST00000449174ENST00000461350ENST00000488111ENST00000492423ENST00000611614ENSG00000156973ENST00000287600ENST00000477748ENSG00000163273ENST00000295440ENST00000409852ENSG00000260622ENST00000569668ENSG00000261096ENST00000563949CIL_0007FO_0002ENSMUSG00000026240ENSMUST00000027446ENSMUST00000121534ENSMUST00000122884ENSMUST00000127219ENSMUST00000138280ENSMUST00000149542ENSMUSG00000026241ENSMUST00000027449
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144524 ENST00000350033 1.979±0.00 N/A N/A 2.958±1.61 2.009±0.00 1.688±0.00 N/A N/A 0.829±0.00 1.106±0.00 N/A 2.664±2.00 2.171±0.18 N/A
ENST00000357490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000410017 2.284±0.00 5.468±0.00 N/A N/A 3.406±0.00 2.145±0.00 1.858±0.00 3.659±0.00 1.203±0.00 2.335±0.00 2.798±1.23 6.360±0.51 3.776±0.03 11.650±0.00
ENST00000410024 N/A N/A N/A N/A N/A 1.269±0.00 N/A 0.840±0.00 N/A N/A N/A 0.947±0.00 N/A N/A
ENST00000412591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412922 N/A 4.101±0.00 N/A 6.539±0.00 2.897±0.00 2.406±0.00 2.569±0.00 2.351±0.00 1.759±0.00 3.901±0.00 N/A 6.247±0.99 4.287±0.61 12.418±3.60
ENST00000413197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.213±0.00 N/A
ENST00000432387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449174 N/A N/A N/A N/A N/A 2.258±0.00 N/A N/A N/A N/A N/A 12.727±0.00 8.619±0.00 28.782±0.00
ENST00000449784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461350 N/A N/A 1.243±0.00 N/A 0.448±0.00 0.726±0.00 0.516±0.00 0.246±0.00 N/A 0.832±0.00 N/A 1.295±0.62 N/A N/A
ENST00000466901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488111 N/A N/A 0.594±0.00 N/A 0.666±0.00 N/A N/A 0.625±0.00 1.480±0.00 N/A N/A N/A N/A N/A
ENST00000492423 N/A N/A N/A N/A 2.238±0.00 2.122±0.00 N/A N/A N/A N/A N/A 3.057±0.00 N/A N/A
ENST00000611614 N/A N/A N/A N/A N/A N/A N/A 1.670±0.00 N/A N/A N/A N/A N/A N/A
ENST00000620578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000156973 ENST00000287600 8.042±0.00 9.827±0.00 1.205±0.00 10.320±5.31 3.683±2.37 4.596±3.16 3.498±2.49 5.368±4.66 2.551±0.24 5.063±2.74 2.815±1.75 8.806±5.56 13.218±5.79 17.581±0.00
ENST00000409772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477748 N/A N/A N/A N/A N/A N/A N/A 0.541±0.00 N/A N/A N/A N/A N/A 19.631±5.52
ENST00000486044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163273 ENST00000295440 N/A 2.840±0.00 N/A 3.109±0.00 N/A N/A 0.660±0.05 N/A 0.755±0.00 N/A N/A N/A 0.247±0.09 3.878±0.00
ENST00000409852 N/A 0.348±0.00 0.064±0.00 0.887±0.09 0.012±0.00 N/A 0.210±0.00 N/A N/A N/A N/A 0.298±0.24 0.269±0.19 1.003±0.00
ENSG00000260622 ENST00000569668 N/A N/A N/A 0.331±0.10 N/A N/A N/A N/A N/A N/A N/A 0.103±0.00 N/A N/A
ENSG00000261096 ENST00000563949 0.017±0.00 0.099±0.00 0.290±0.00 0.223±0.02 0.051±0.02 0.213±0.19 0.049±0.00 0.091±0.02 0.244±0.00 N/A 0.025±0.00 0.082±0.06 0.045±0.02 0.060±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026240 ENSMUST00000027446 11.475±3.49 11.020±0.68 14.024±4.08 15.908±10.36 8.217±1.83 13.703±3.34 6.931±0.62 7.288±1.56 10.131±3.38 11.532±2.98 3.718±0.67 15.702±6.46 8.550±3.31 10.598±5.53
ENSMUST00000121534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.194±0.00 N/A N/A N/A
ENSMUST00000122884 N/A 1.596±0.00 N/A 1.444±0.00 1.856±0.00 N/A N/A N/A N/A N/A N/A 1.187±0.27 1.639±0.53 0.367±0.00
ENSMUST00000127219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.524±0.00
ENSMUST00000138280 2.126±0.00 N/A N/A 9.869±3.49 N/A N/A N/A 1.665±0.00 4.681±0.31 N/A 1.199±0.19 4.498±0.00 3.126±0.94 0.328±0.00
ENSMUST00000149542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.567±0.00
ENSMUSG00000026241 ENSMUST00000027449 0.695±0.47 0.211±0.06 0.064±0.02 1.668±0.31 0.395±0.07 0.129±0.10 0.055±0.03 0.053±0.03 0.045±0.04 0.091±0.05 0.301±0.16 20.803±10.74 5.457±2.26 0.110±0.07

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