C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007FP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163283-ENSG00000163286 CGP 9606 2:232378534-232410714
GeneTranscriptPositionBiotype
ENSG00000163283 (ALPP)
alkaline phosphatase, placental 		ENST00000392027 (ALPP-001) 232378534-232382889 protein_coding
ENST00000474529 (ALPP-003) 232378724-232379784 retained_intron
ENST00000485563 (ALPP-002) 232381239-232382609 retained_intron
ENSG00000163286 (ALPPL2)
alkaline phosphatase, placental-like 2 		ENST00000295453 (ALPPL2-001) 232406843-232410714 protein_coding
ENST00000611550 (ALPPL2-201) 232406895-232409872 protein_coding
ENSG00000244280 (ECEL1P2)
endothelin converting enzyme-like 1, pseudogene 2 		ENST00000461596 (ECEL1P2-002) 232385750-232387044 processed_transcript
ENST00000465689 (ECEL1P2-001) 232386701-232387457 transcribed_unprocessed_pseudogene

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CIL_0007FP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163286-ENSG00000163295 CGP 9606 2:232406843-232460032
GeneTranscriptPositionBiotype
ENSG00000163286 (ALPPL2)
alkaline phosphatase, placental-like 2 		ENST00000295453 (ALPPL2-001) 232406843-232410714 protein_coding
ENST00000611550 (ALPPL2-201) 232406895-232409872 protein_coding
ENSG00000163295 (ALPI)
alkaline phosphatase, intestinal 		ENST00000295463 (ALPI-001) 232456123-232460032 protein_coding
ENST00000457560 (ALPI-002) 232456125-232459284 nonsense_mediated_decay
ENSG00000204121 (AC068134.5)
 ENST00000373592 (AC068134.5-001) 232415818-232419816 unprocessed_pseudogene
ENSG00000223788 (DIS3L2P1)
DIS3L2 pseudogene 1 		ENST00000509197 (DIS3L2P1-001) 232442034-232447418 unprocessed_pseudogene
ENSG00000237087 (AC068134.6)
 ENST00000437095 (AC068134.6-001) 232420661-232421461 lincRNA

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CIL_0007FP_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026246-ENSMUSG00000079440 CGP 10090 1:87086694-87101606
GeneTranscriptPositionBiotype
ENSMUSG00000026246 (Alppl2)
alkaline phosphatase, placental-like 2 		ENSMUST00000027455 (Alppl2-001) 87086694-87089911 protein_coding
ENSMUST00000188310 (Alppl2-002) 87086695-87089928 protein_coding
ENSMUST00000190082 (Alppl2-003) 87088780-87089805 retained_intron
ENSMUSG00000079440 (Alpi)
alkaline phosphatase, intestinal 		ENSMUST00000113270 (Alpi-001) 87098002-87101606 protein_coding
ENSMUSG00000101625 (RP24-286D13.6)
predicted gene 29371 		ENSMUST00000186823 (RP24-286D13.6-001) 87080171-87096418 lincRNA

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CIL_0007FP_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000079440-ENSMUSG00000036500 CGP 10090 1:87098002-87127912
GeneTranscriptPositionBiotype
ENSMUSG00000036500 (Akp3)
alkaline phosphatase 3, intestine, not Mn requiring 		ENSMUST00000044878 (Akp3-001) 87125008-87127912 protein_coding
ENSMUST00000187662 (Akp3-002) 87124973-87127148 retained_intron
ENSMUSG00000079440 (Alpi)
alkaline phosphatase, intestinal 		ENSMUST00000113270 (Alpi-001) 87098002-87101606 protein_coding
ENSMUSG00000100940 (RP23-416O18.2)
predicted gene 29372 		ENSMUST00000191416 (RP23-416O18.2-001) 87116321-87117158 processed_pseudogene

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007FP_0001ENSG00000163283ENST00000392027ENST00000474529ENST00000485563ENSG00000163286ENST00000295453ENST00000611550ENSG00000244280ENST00000461596ENST00000465689CIL_0007FP_0002ENSG00000163286ENST00000295453ENST00000611550ENSG00000163295ENST00000295463ENST00000457560ENSG00000204121ENST00000373592ENSG00000223788ENST00000509197ENSG00000237087ENST00000437095CIL_0007FP_0003ENSMUSG00000026246ENSMUST00000027455ENSMUST00000188310ENSMUST00000190082ENSMUSG00000079440ENSMUST00000113270ENSMUSG00000101625ENSMUST00000186823CIL_0007FP_0004ENSMUSG00000036500ENSMUST00000044878ENSMUST00000187662ENSMUSG00000079440ENSMUST00000113270ENSMUSG00000100940ENSMUST00000191416
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007FP_0001ENSG00000163283ENST00000392027ENST00000474529ENST00000485563ENSG00000163286ENST00000295453ENST00000611550ENSG00000244280ENST00000461596ENST00000465689CIL_0007FP_0002ENSG00000163286ENST00000295453ENST00000611550ENSG00000163295ENST00000295463ENST00000457560ENSG00000204121ENST00000373592ENSG00000223788ENST00000509197ENSG00000237087ENST00000437095CIL_0007FP_0003ENSMUSG00000026246ENSMUST00000027455ENSMUST00000188310ENSMUST00000190082ENSMUSG00000079440ENSMUST00000113270ENSMUSG00000101625ENSMUST00000186823CIL_0007FP_0004ENSMUSG00000036500ENSMUST00000044878ENSMUST00000187662ENSMUSG00000079440ENSMUST00000113270ENSMUSG00000100940ENSMUST00000191416
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163283 ENST00000392027 N/A 0.057±0.00 N/A N/A 0.054±0.00 0.058±0.00 N/A 0.010±0.00 N/A 0.233±0.18 N/A 0.072±0.04 90.453±93.09 0.065±0.06
ENST00000474529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A
ENST00000485563 N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A 0.952±0.00 N/A 0.245±0.16 79.293±90.48 0.114±0.00
ENSG00000163286 ENST00000295453 N/A N/A N/A N/A N/A 0.166±0.00 N/A 0.039±0.00 N/A 0.269±0.21 N/A N/A N/A 0.227±0.11
ENST00000611550 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.098±0.00 N/A 0.065±0.02 0.824±0.61 0.041±0.00
ENSG00000244280 ENST00000461596 0.122±0.00 0.015±0.00 N/A 0.055±0.03 N/A 0.278±0.00 N/A N/A N/A 1.741±0.50 N/A 0.156±0.09 0.759±0.09 0.519±0.03
ENST00000465689 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.820±0.00 N/A 0.351±0.18 1.306±0.06 0.310±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163286 ENST00000295453 N/A N/A N/A N/A N/A 0.166±0.00 N/A 0.039±0.00 N/A 0.269±0.21 N/A N/A N/A 0.227±0.11
ENST00000611550 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.098±0.00 N/A 0.065±0.02 0.824±0.61 0.041±0.00
ENSG00000163295 ENST00000295463 N/A N/A 0.163±0.00 N/A N/A 0.330±0.26 N/A 0.405±0.00 N/A N/A N/A 0.172±0.13 N/A 0.029±0.00
ENST00000457560 N/A N/A 0.348±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000204121 ENST00000373592 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.163±0.00 N/A 0.027±0.01 0.110±0.01 N/A
ENSG00000223788 ENST00000509197 N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A N/A
ENSG00000237087 ENST00000437095 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.138±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026246 ENSMUST00000027455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.201±0.00 0.010±0.00 0.647±0.13
ENSMUST00000188310 0.033±0.00 N/A N/A N/A N/A 0.057±0.03 N/A N/A 0.006±0.00 0.030±0.00 N/A 0.127±0.08 0.024±0.00 0.620±0.54
ENSMUST00000190082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.120±0.00 0.115±0.00 0.163±0.00
ENSMUSG00000079440 ENSMUST00000113270 N/A 0.131±0.05 0.015±0.01 0.017±0.01 0.019±0.00 16.321±3.21 0.025±0.00 0.010±0.00 0.156±0.18 0.135±0.09 N/A 0.307±0.06 0.045±0.03 N/A
ENSMUSG00000101625 ENSMUST00000186823 0.223±0.07 0.115±0.04 2.664±1.08 0.662±0.00 0.376±0.19 0.115±0.05 0.271±0.20 0.067±0.04 0.103±0.06 0.174±0.06 0.098±0.01 2.700±2.21 0.189±0.20 1.129±0.44
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036500 ENSMUST00000044878 N/A N/A 0.020±0.00 0.029±0.00 0.034±0.01 0.056±0.02 0.034±0.00 N/A N/A 0.030±0.01 N/A 0.323±0.14 0.035±0.01 0.283±0.00
ENSMUST00000187662 N/A 0.069±0.00 N/A 0.010±0.00 N/A 0.089±0.02 0.034±0.00 N/A 0.024±0.00 0.025±0.00 N/A 0.100±0.00 N/A 0.068±0.00
ENSMUSG00000079440 ENSMUST00000113270 N/A 0.131±0.05 0.015±0.01 0.017±0.01 0.019±0.00 16.321±3.21 0.025±0.00 0.010±0.00 0.156±0.18 0.135±0.09 N/A 0.307±0.06 0.045±0.03 N/A
ENSMUSG00000100940 ENSMUST00000191416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.507±0.27

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