C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007FX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000030498-ENSDARG00000053869 CGP 7955 10:7778351-7837635
GeneTranscriptPositionBiotype
ENSDARG00000053869 (ankrd55)
ankyrin repeat domain 55 		ENSDART00000075982 (ankrd55-001) 7814066-7837635 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0007FX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134352-ENSG00000164512 CGP 9606 5:55935095-56233359
GeneTranscriptPositionBiotype
ENSG00000134352 (IL6ST)
interleukin 6 signal transducer 		ENST00000336909 (IL6ST-201) 55935099-55976314 protein_coding
ENST00000381286 (IL6ST-005) 55941765-55976278 protein_coding
ENST00000381287 (IL6ST-202) 55935125-55976314 protein_coding
ENST00000381293 (IL6ST-003) 55941765-55976278 protein_coding
ENST00000381294 (IL6ST-012) 55941082-55976278 protein_coding
ENST00000381298 (IL6ST-001) 55935095-55994993 protein_coding
ENST00000396816 (IL6ST-203) 55964209-55976278 protein_coding
ENST00000423954 (IL6ST-008) 55947565-55951506 processed_transcript
ENST00000502326 (IL6ST-011) 55941028-55994964 protein_coding
ENST00000503773 (IL6ST-006) 55940966-55994792 nonsense_mediated_decay
ENST00000506241 (IL6ST-009) 55955980-55960480 retained_intron
ENST00000522633 (IL6ST-007) 55947561-55982800 protein_coding
ENST00000523039 (IL6ST-010) 55941523-55947594 retained_intron
ENST00000577363 (IL6ST-004) 55964209-55994794 processed_transcript
ENST00000583149 (IL6ST-013) 55941694-55951637 retained_intron
ENSG00000164512 (ANKRD55)
ankyrin repeat domain 55 		ENST00000341048 (ANKRD55-001) 56099678-56233359 protein_coding
ENST00000434982 (ANKRD55-005) 56099882-56116951 protein_coding
ENST00000504958 (ANKRD55-002) 56099773-56232926 protein_coding
ENST00000505970 (ANKRD55-007) 56111578-56160929 processed_transcript
ENST00000513241 (ANKRD55-006) 56143783-56233294 protein_coding
ENST00000519114 (ANKRD55-008) 56176235-56233327 processed_transcript
ENSG00000227908 (FLJ31104)
uncharacterized LOC441072 		ENST00000500093 (FLJ31104-001) 55995167-56003649 antisense
ENSG00000238326 (snoU13)
Small nucleolar RNA U13 		ENST00000459441 (snoU13.1-204) 56000518-56000621 snoRNA
ENSG00000243592 (RPL17P22)
ribosomal protein L17 pseudogene 22 		ENST00000467688 (RPL17P22-001) 56136979-56137531 processed_pseudogene
ENSG00000249236 (CTD-2227I18.1)
 ENST00000511861 (CTD-2227I18.1-001) 56059050-56067372 lincRNA
ENSG00000251435 (RP11-365H8.2)
 ENST00000510813 (RP11-365H8.2-001) 56192530-56193633 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007FX_0001ENSDARG00000053869ENSDART00000075982CIL_0007FX_0002ENSG00000134352ENST00000336909ENST00000381286ENST00000381287ENST00000381293ENST00000381294ENST00000381298ENST00000396816ENST00000423954ENST00000502326ENST00000503773ENST00000506241ENST00000522633ENST00000523039ENST00000577363ENST00000583149ENSG00000164512ENST00000341048ENST00000434982ENST00000504958ENST00000505970ENST00000513241ENST00000519114ENSG00000227908ENST00000500093ENSG00000238326ENST00000459441ENSG00000243592ENST00000467688ENSG00000249236ENST00000511861ENSG00000251435ENST00000510813
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007FX_0001ENSDARG00000053869ENSDART00000075982CIL_0007FX_0002ENSG00000134352ENST00000336909ENST00000381298ENST00000502326ENST00000522633ENSG00000164512ENST00000341048ENST00000434982ENST00000504958ENST00000505970ENST00000519114ENSG00000227908ENST00000500093ENSG00000238326ENST00000459441ENSG00000243592ENST00000467688ENSG00000249236ENST00000511861ENSG00000251435ENST00000510813
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000053869 ENSDART00000075982 N/A N/A N/A 2.230±1.86 N/A N/A 0.038±0.00 0.239±0.00 0.031±0.00 N/A 0.207±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134352 ENST00000336909 N/A 4.201±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.922±1.27 22.140±0.00 5.564±0.00
ENST00000381286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000381287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000381293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000381294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000381298 N/A 9.766±0.00 N/A 10.027±6.05 25.723±0.00 N/A 2.535±0.00 37.514±0.00 12.460±0.00 42.383±0.00 3.996±0.00 21.574±7.82 6.700±3.83 2.109±0.00
ENST00000396816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502326 N/A N/A N/A N/A N/A N/A N/A N/A 23.819±0.00 N/A N/A N/A N/A N/A
ENST00000503773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522633 N/A N/A N/A N/A N/A N/A 15.604±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000523039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164512 ENST00000341048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.208±0.11 N/A
ENST00000434982 0.022±0.00 0.286±0.00 0.060±0.00 0.735±0.00 0.038±0.00 0.054±0.02 0.068±0.00 2.010±0.00 0.303±0.19 N/A N/A 0.066±0.00 0.164±0.14 7.086±0.00
ENST00000504958 N/A N/A N/A 0.165±0.00 0.091±0.00 N/A N/A 0.115±0.00 N/A N/A N/A N/A N/A N/A
ENST00000505970 0.039±0.00 N/A N/A N/A 0.144±0.00 0.026±0.00 0.119±0.00 N/A N/A 0.076±0.00 N/A N/A N/A N/A
ENST00000513241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519114 N/A N/A N/A 2.627±0.00 N/A N/A N/A N/A N/A 1.303±0.00 N/A N/A N/A N/A
ENSG00000227908 ENST00000500093 0.097±0.00 0.453±0.00 0.111±0.00 0.461±0.00 0.087±0.00 0.051±0.02 0.083±0.03 0.121±0.05 0.055±0.00 0.085±0.04 0.089±0.00 0.187±0.08 0.045±0.00 0.599±0.12
ENSG00000238326 ENST00000459441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.890±0.00 N/A N/A
ENSG00000243592 ENST00000467688 0.072±0.00 N/A N/A N/A N/A 0.023±0.00 0.045±0.00 N/A N/A 0.093±0.00 N/A 0.155±0.09 0.056±0.00 0.102±0.01
ENSG00000249236 ENST00000511861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.145±0.00 N/A
ENSG00000251435 ENST00000510813 N/A 0.027±0.00 N/A N/A 0.581±0.00 N/A N/A 0.443±0.00 N/A N/A N/A 0.141±0.12 N/A N/A

Loading