C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007G3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000008461-ENSDARG00000038300 CGP 7955 8:42137964-42186903
GeneTranscriptPositionBiotype
ENSDARG00000008461 (anapc5)
anaphase promoting complex subunit 5 		ENSDART00000026592 (anapc5-201) 42137964-42156300 protein_coding
ENSDARG00000038300 (rnf34a)
ring finger protein 34a 		ENSDART00000055861 (rnf34a-201) 42161992-42186903 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0007G3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000089053-ENSG00000170633 CGP 9606 12:121308245-121430623
GeneTranscriptPositionBiotype
ENSG00000089053 (ANAPC5)
anaphase promoting complex subunit 5 		ENST00000261819 (ANAPC5-001) 121308357-121352462 protein_coding
ENST00000366333 (ANAPC5-022) 121318535-121321111 retained_intron
ENST00000422342 (ANAPC5-021) 121308245-121310394 retained_intron
ENST00000441917 (ANAPC5-003) 121308357-121347883 protein_coding
ENST00000534976 (ANAPC5-004) 121308357-121352304 retained_intron
ENST00000535463 (ANAPC5-020) 121328257-121328835 retained_intron
ENST00000535472 (ANAPC5-009) 121326353-121337367 processed_transcript
ENST00000535482 (ANAPC5-007) 121308358-121331391 protein_coding
ENST00000535641 (ANAPC5-008) 121308332-121335609 retained_intron
ENST00000536416 (ANAPC5-015) 121345840-121352417 processed_transcript
ENST00000536837 (ANAPC5-011) 121345999-121399896 protein_coding
ENST00000538223 (ANAPC5-017) 121328999-121337395 processed_transcript
ENST00000538334 (ANAPC5-019) 121326486-121335172 retained_intron
ENST00000539079 (ANAPC5-010) 121308357-121337393 nonsense_mediated_decay
ENST00000539612 (ANAPC5-018) 121330583-121342071 retained_intron
ENST00000539871 (ANAPC5-012) 121345924-121352395 protein_coding
ENST00000541652 (ANAPC5-016) 121335517-121347875 retained_intron
ENST00000541887 (ANAPC5-002) 121308357-121352388 protein_coding
ENST00000544314 (ANAPC5-006) 121308358-121335682 processed_transcript
ENST00000544442 (ANAPC5-013) 121335533-121352385 protein_coding
ENST00000545218 (ANAPC5-005) 121317890-121337331 processed_transcript
ENST00000545801 (ANAPC5-014) 121346795-121352327 retained_intron
ENSG00000089094 (KDM2B)
lysine (K)-specific demethylase 2B 		ENST00000377069 (KDM2B-005) 121429097-121580459 protein_coding
ENST00000377071 (KDM2B-001) 121429777-121580984 protein_coding
ENST00000446152 (KDM2B-006) 121509572-121579644 protein_coding
ENST00000536036 (KDM2B-023) 121439913-121441244 retained_intron
ENST00000536437 (KDM2B-201) 121429871-121580954 protein_coding
ENST00000538046 (KDM2B-004) 121493846-121581015 protein_coding
ENST00000538243 (KDM2B-013) 121444015-121470553 retained_intron
ENST00000538379 (KDM2B-015) 121510007-121536069 protein_coding
ENST00000538503 (KDM2B-020) 121429509-121549639 retained_intron
ENST00000539394 (KDM2B-007) 121532846-121580225 protein_coding
ENST00000540191 (KDM2B-008) 121574365-121580140 retained_intron
ENST00000541318 (KDM2B-014) 121513328-121536128 protein_coding
ENST00000541511 (KDM2B-012) 121521046-121536235 protein_coding
ENST00000542030 (KDM2B-017) 121509943-121524795 protein_coding
ENST00000542973 (KDM2B-022) 121429509-121509706 protein_coding
ENST00000543025 (KDM2B-002) 121429871-121580954 nonsense_mediated_decay
ENST00000543852 (KDM2B-011) 121516347-121537616 protein_coding
ENST00000545022 (KDM2B-016) 121513293-121534660 protein_coding
ENST00000611216 (KDM2B-202) 121429099-121581015 protein_coding
ENSG00000170633 (RNF34)
ring finger protein 34, E3 ubiquitin protein ligase 		ENST00000361234 (RNF34-001) 121400041-121424351 protein_coding
ENST00000392464 (RNF34-005) 121400144-121430623 protein_coding
ENST00000392465 (RNF34-002) 121400119-121424348 protein_coding
ENST00000553407 (RNF34-003) 121400129-121418740 retained_intron
ENST00000554484 (RNF34-004) 121419898-121424349 retained_intron
ENST00000554606 (RNF34-006) 121400142-121417789 protein_coding
ENST00000554868 (RNF34-009) 121409455-121417521 protein_coding
ENST00000555076 (RNF34-008) 121400147-121423906 protein_coding
ENST00000556562 (RNF34-007) 121400128-121416609 retained_intron
ENST00000557402 (RNF34-010) 121409475-121416286 protein_coding
ENST00000613529 (RNF34-201) 121400083-121424352 protein_coding

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CIL_0007G3_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029472-ENSMUSG00000029474 CGP 10090 5:122787469-122868945
GeneTranscriptPositionBiotype
ENSMUSG00000029472 (Anapc5)
anaphase-promoting complex subunit 5 		ENSMUST00000086216 (Anapc5-201) 122787469-122821339 protein_coding
ENSMUSG00000029474 (Rnf34)
ring finger protein 34 		ENSMUST00000031434 (Rnf34-201) 122850188-122868945 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007G3_0001ENSDARG00000008461ENSDART00000026592ENSDARG00000038300ENSDART00000055861CIL_0007G3_0002ENSG00000089053ENST00000261819ENST00000366333ENST00000422342ENST00000441917ENST00000534976ENST00000535463ENST00000535472ENST00000535482ENST00000535641ENST00000536416ENST00000536837ENST00000538223ENST00000538334ENST00000539079ENST00000539612ENST00000539871ENST00000541652ENST00000541887ENST00000544314ENST00000544442ENST00000545218ENST00000545801ENSG00000089094ENST00000377069ENST00000377071ENST00000446152ENST00000536036ENST00000536437ENST00000538046ENST00000538243ENST00000538379ENST00000538503ENST00000539394ENST00000540191ENST00000541318ENST00000541511ENST00000542030ENST00000542973ENST00000543025ENST00000543852ENST00000545022ENST00000611216ENSG00000170633ENST00000361234ENST00000392464ENST00000392465ENST00000553407ENST00000554484ENST00000554606ENST00000554868ENST00000555076ENST00000556562ENST00000557402ENST00000613529CIL_0007G3_0003ENSMUSG00000029472ENSMUST00000086216ENSMUSG00000029474ENSMUST00000031434
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007G3_0001ENSDARG00000008461ENSDART00000026592ENSDARG00000038300ENSDART00000055861CIL_0007G3_0002ENSG00000089053ENST00000261819ENST00000441917ENST00000534976ENST00000535482ENST00000535641ENST00000538334ENST00000539079ENST00000541887ENST00000544314ENST00000544442ENSG00000089094ENST00000377069ENST00000377071ENST00000538243ENST00000542973ENST00000611216ENSG00000170633ENST00000361234ENST00000392465ENST00000554484ENST00000613529CIL_0007G3_0003ENSMUSG00000029472ENSMUST00000086216ENSMUSG00000029474ENSMUST00000031434
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008461 ENSDART00000026592 N/A N/A N/A 1.702±1.25 N/A N/A 1.469±0.80 2.106±0.00 0.329±0.00 N/A 1.231±0.00 N/A N/A N/A
ENSDARG00000038300 ENSDART00000055861 N/A N/A N/A 3.335±1.20 N/A N/A 1.288±0.77 2.855±0.71 0.274±0.00 N/A 0.437±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000089053 ENST00000261819 5.830±0.00 11.906±0.00 N/A 11.261±4.90 7.579±2.63 7.978±0.00 5.366±3.37 N/A N/A 4.683±0.00 10.315±0.00 11.505±6.77 N/A 9.767±0.00
ENST00000366333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441917 N/A N/A 1.730±0.00 7.867±0.00 N/A N/A N/A 4.620±0.00 N/A 5.585±0.00 N/A 11.146±0.00 8.502±0.00 12.120±0.00
ENST00000534976 N/A N/A N/A N/A 2.628±0.00 N/A 0.813±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000535463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535482 N/A N/A N/A N/A N/A N/A N/A 2.408±0.00 N/A N/A N/A N/A N/A N/A
ENST00000535641 N/A N/A N/A N/A N/A N/A N/A 7.294±0.00 N/A N/A 2.061±0.00 N/A N/A N/A
ENST00000536416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538334 N/A 3.077±0.00 N/A N/A N/A 1.365±0.00 N/A N/A 2.403±0.00 1.578±0.00 N/A 1.554±0.01 N/A N/A
ENST00000539079 5.682±0.00 N/A N/A 5.548±0.00 N/A N/A N/A N/A 5.368±0.00 N/A 3.688±0.39 N/A 8.265±1.89 N/A
ENST00000539612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541887 7.426±0.00 10.431±0.00 N/A N/A 11.533±0.00 4.845±0.02 6.191±0.00 12.183±0.00 9.033±0.00 N/A 5.095±0.21 24.354±0.50 15.901±7.04 8.119±0.00
ENST00000544314 8.067±0.00 25.804±0.00 N/A 12.953±0.00 13.419±0.00 10.339±0.00 9.870±0.00 23.033±0.00 15.430±0.00 12.313±0.00 9.734±0.00 31.532±0.40 8.388±0.00 15.160±0.00
ENST00000544442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.301±0.00 N/A 23.013±0.00
ENST00000545218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000089094 ENST00000377069 N/A N/A N/A 1.194±0.00 1.479±0.23 N/A N/A N/A N/A N/A N/A 2.866±0.36 1.074±0.00 4.159±0.00
ENST00000377071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.926±0.00 N/A N/A
ENST00000446152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538243 N/A N/A 0.772±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542973 3.260±0.00 10.525±0.00 N/A N/A 2.732±0.49 N/A N/A 2.079±0.68 1.455±0.19 N/A 1.692±0.00 12.974±7.37 4.888±1.94 7.494±0.26
ENST00000543025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611216 N/A 5.961±0.00 N/A 3.850±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000170633 ENST00000361234 4.924±0.00 N/A 1.396±0.00 10.301±0.62 6.834±0.41 4.825±0.74 5.217±2.73 4.288±1.68 4.204±1.91 6.259±0.55 10.590±6.73 11.742±5.10 8.478±3.05 11.303±1.17
ENST00000392464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.382±0.00
ENST00000553407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554484 N/A N/A 1.359±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613529 2.866±0.00 N/A N/A 8.489±0.00 N/A 6.067±0.00 N/A 4.209±0.00 2.105±0.00 N/A N/A N/A N/A 9.517±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029472 ENSMUST00000086216 86.896±22.25 48.283±5.56 62.341±8.53 95.685±44.25 64.943±16.77 41.594±10.55 39.287±7.40 42.478±8.11 42.546±35.76 43.753±10.81 166.221±24.99 87.255±21.64 63.456±27.36 24.605±8.45
ENSMUSG00000029474 ENSMUST00000031434 12.642±4.76 6.339±0.32 10.524±1.42 21.435±2.12 7.398±1.77 9.273±2.28 12.747±0.85 12.410±1.60 5.197±1.69 12.453±0.62 9.038±0.64 16.694±4.83 21.094±2.94 27.323±4.07

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