C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007GJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131379-ENSG00000154783 CGP 9606 3:14675099-14934565
GeneTranscriptPositionBiotype
ENSG00000131379 (C3orf20)
chromosome 3 open reading frame 20 		ENST00000253697 (C3orf20-001) 14675099-14773034 protein_coding
ENST00000412910 (C3orf20-004) 14675179-14773034 protein_coding
ENST00000435614 (C3orf20-003) 14675141-14773005 protein_coding
ENST00000495387 (C3orf20-005) 14704355-14722239 processed_transcript
ENSG00000154783 (FGD5)
FYVE, RhoGEF and PH domain containing 5 		ENST00000285046 (FGD5-001) 14818962-14934388 protein_coding
ENST00000457774 (FGD5-005) 14821432-14900453 protein_coding
ENST00000468662 (FGD5-002) 14882305-14933438 processed_transcript
ENST00000476851 (FGD5-003) 14896962-14933439 processed_transcript
ENST00000487605 (FGD5-004) 14930763-14933438 retained_intron
ENST00000543601 (FGD5-201) 14818962-14934565 protein_coding
ENSG00000230172 (AC090957.2)
 ENST00000422657 (AC090957.2-001) 14764952-14767440 antisense
ENSG00000260902 (RP11-95M5.1)
 ENST00000566553 (RP11-95M5.1-001) 14799331-14811414 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0007GJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034063-ENSMUSG00000034037 CGP 10090 6:91914759-92076004
GeneTranscriptPositionBiotype
ENSMUSG00000034037 (Fgd5)
FYVE, RhoGEF and PH domain containing 5 		ENSMUST00000089334 (Fgd5-001) 91978878-92076004 protein_coding
ENSMUST00000113466 (Fgd5-201) 91987110-92076004 protein_coding
ENSMUST00000130369 (Fgd5-003) 92071188-92074215 processed_transcript
ENSMUST00000146743 (Fgd5-002) 92067429-92076004 processed_transcript
ENSMUSG00000034063 (4930590J08Rik)
RIKEN cDNA 4930590J08 gene 		ENSMUST00000059318 (4930590J08Rik-201) 91914759-91950640 protein_coding
ENSMUSG00000087317 (4930466I24Rik)
RIKEN cDNA 4930466I24 gene 		ENSMUST00000144105 (4930466I24Rik-001) 92012394-92016117 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007GJ_0001ENSG00000131379ENST00000253697ENST00000412910ENST00000435614ENST00000495387ENSG00000154783ENST00000285046ENST00000457774ENST00000468662ENST00000476851ENST00000487605ENST00000543601ENSG00000230172ENST00000422657ENSG00000260902ENST00000566553CIL_0007GJ_0002ENSMUSG00000034037ENSMUST00000089334ENSMUST00000113466ENSMUST00000130369ENSMUST00000146743ENSMUSG00000034063ENSMUST00000059318ENSMUSG00000087317ENSMUST00000144105
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007GJ_0001ENSG00000131379ENST00000253697ENST00000412910ENST00000435614ENST00000495387ENSG00000154783ENST00000285046ENSG00000230172ENST00000422657ENSG00000260902ENST00000566553CIL_0007GJ_0002ENSMUSG00000034037ENSMUST00000089334ENSMUST00000113466ENSMUST00000146743ENSMUSG00000034063ENSMUST00000059318ENSMUSG00000087317ENSMUST00000144105
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131379 ENST00000253697 0.005±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A 0.013±0.00 N/A 0.549±0.09
ENST00000412910 N/A N/A 0.009±0.00 N/A N/A N/A N/A 0.087±0.06 N/A N/A N/A N/A 0.073±0.03 2.287±0.63
ENST00000435614 N/A N/A 0.010±0.00 0.104±0.00 N/A N/A 0.023±0.00 0.014±0.00 N/A N/A N/A N/A N/A 0.857±0.00
ENST00000495387 N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000154783 ENST00000285046 15.815±0.00 8.790±0.00 3.536±0.00 N/A N/A N/A 1.662±0.00 N/A 3.714±0.00 8.870±4.56 N/A N/A 13.179±1.89 N/A
ENST00000457774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230172 ENST00000422657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00
ENSG00000260902 ENST00000566553 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A 0.029±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034037 ENSMUST00000089334 4.142±1.36 3.095±0.48 1.702±0.49 1.881±1.36 2.397±1.11 1.485±0.35 3.073±0.30 3.060±0.49 0.577±0.25 10.786±1.20 1.444±0.49 3.017±0.76 1.161±1.09 0.283±0.05
ENSMUST00000113466 N/A N/A N/A 0.351±0.00 0.440±0.00 N/A N/A N/A 0.227±0.00 N/A 0.955±0.32 2.980±1.41 0.222±0.00 0.106±0.00
ENSMUST00000130369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146743 4.086±2.16 N/A 2.491±0.06 1.781±0.55 1.254±0.00 1.126±0.09 1.646±0.37 1.906±0.20 0.525±0.24 N/A 1.099±0.43 2.370±0.47 1.150±0.42 0.170±0.00
ENSMUSG00000034063 ENSMUST00000059318 0.036±0.01 0.058±0.04 0.013±0.00 0.058±0.03 0.037±0.01 0.034±0.00 0.028±0.01 0.021±0.00 0.011±0.00 0.025±0.01 0.025±0.01 0.059±0.04 0.157±0.10 23.126±12.47
ENSMUSG00000087317 ENSMUST00000144105 0.030±0.00 0.045±0.01 0.003±0.00 0.021±0.01 0.026±0.01 0.027±0.00 0.047±0.02 0.048±0.04 0.021±0.01 0.156±0.03 0.026±0.01 0.051±0.02 0.014±0.01 0.134±0.07

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