C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007I9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000018847-ENSDARG00000014310 CGP 7955 Zv9_scaffold3539:192-46956
GeneTranscriptPositionBiotype
ENSDARG00000014310 (arl1)
ADP-ribosylation factor-like 1 		ENSDART00000021786 (arl1-201) 43802-46956 protein_coding
ENSDARG00000018847 (UTP20)
UTP20, small subunit (SSU) processome component, homolog (yeast) 		ENSDART00000033957 (UTP20-201) 192-43587 protein_coding
CIL_0007I9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000120800-ENSG00000120805 CGP 9606 12:101280109-101407820
GeneTranscriptPositionBiotype
ENSG00000120800 (UTP20)
UTP20, small subunit (SSU) processome component, homolog (yeast) 		ENST00000261637 (UTP20-001) 101280109-101386616 protein_coding
ENST00000551345 (UTP20-004) 101326855-101329345 retained_intron
ENST00000551825 (UTP20-002) 101280128-101291427 retained_intron
ENST00000551998 (UTP20-003) 101289903-101290961 retained_intron
ENSG00000120805 (ARL1)
ADP-ribosylation factor-like 1 		ENST00000261636 (ARL1-001) 101393120-101407820 protein_coding
ENST00000536227 (ARL1-005) 101394944-101407461 protein_coding
ENST00000539055 (ARL1-004) 101394918-101407746 protein_coding
ENST00000548070 (ARL1-010) 101405884-101407502 protein_coding
ENST00000549283 (ARL1-009) 101396540-101407746 processed_transcript
ENST00000549302 (ARL1-006) 101403416-101407756 processed_transcript
ENST00000550597 (ARL1-012) 101395507-101401486 retained_intron
ENST00000551092 (ARL1-013) 101396414-101407762 nonsense_mediated_decay
ENST00000551671 (ARL1-007) 101396143-101407753 protein_coding
ENST00000551688 (ARL1-008) 101395488-101407749 protein_coding
ENST00000551828 (ARL1-011) 101395592-101407463 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007I9_0001ENSDARG00000014310ENSDART00000021786ENSDARG00000018847ENSDART00000033957CIL_0007I9_0002ENSG00000120800ENST00000261637ENST00000551345ENST00000551825ENST00000551998ENSG00000120805ENST00000261636ENST00000536227ENST00000539055ENST00000548070ENST00000549283ENST00000549302ENST00000550597ENST00000551092ENST00000551671ENST00000551688ENST00000551828
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007I9_0001ENSDARG00000014310ENSDART00000021786ENSDARG00000018847ENSDART00000033957CIL_0007I9_0002ENSG00000120800ENST00000261637ENSG00000120805ENST00000261636ENST00000536227ENST00000539055ENST00000549283ENST00000551828
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000014310 ENSDART00000021786 N/A N/A N/A 50.609±8.86 N/A N/A 16.105±7.23 17.519±8.72 4.329±0.00 N/A 11.045±0.00 N/A N/A N/A
ENSDARG00000018847 ENSDART00000033957 N/A N/A N/A 2.021±0.09 N/A N/A 1.147±1.11 1.187±0.68 2.554±0.00 N/A 1.460±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120800 ENST00000261637 0.906±0.00 0.973±0.00 1.562±0.00 0.133±0.00 1.605±1.16 1.378±0.71 0.902±0.12 0.921±0.34 0.532±0.22 1.309±0.99 0.721±0.23 2.249±1.90 0.859±0.25 1.314±0.10
ENST00000551345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000120805 ENST00000261636 11.324±0.00 9.612±0.00 4.003±0.00 14.962±4.65 10.727±2.68 9.712±8.12 9.276±4.81 11.448±8.44 9.373±0.09 8.957±3.86 5.392±2.01 14.574±6.47 12.176±1.32 12.934±5.46
ENST00000536227 N/A N/A N/A N/A 2.800±0.00 N/A N/A N/A 6.209±0.00 N/A N/A 7.310±0.00 N/A N/A
ENST00000539055 N/A N/A N/A N/A N/A N/A N/A 3.165±0.00 N/A N/A N/A N/A 6.659±0.00 N/A
ENST00000548070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549283 N/A N/A 4.883±0.00 9.871±0.00 11.362±0.00 9.240±0.00 9.282±0.00 6.241±0.00 11.786±0.00 14.261±0.00 4.183±0.00 18.922±10.45 32.491±0.00 29.641±0.00
ENST00000549302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551828 N/A N/A N/A 20.392±0.00 N/A N/A N/A 28.282±0.00 N/A N/A N/A 12.167±0.00 11.938±0.00 14.228±7.42

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