C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007K3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ONECUT1 UCNEbase 9606 15:52752889-53754980
GeneTranscriptPositionBiotype
ENSG00000166415 (WDR72)
WD repeat domain 72 		ENST00000360509 (WDR72-002) 53515163-53759662 protein_coding
ENST00000396328 (WDR72-001) 53513741-53762878 protein_coding
ENST00000557913 (WDR72-003) 53515159-53759634 protein_coding
ENST00000559418 (WDR72-005) 53517470-53733183 protein_coding
ENST00000560036 (WDR72-004) 53615881-53759384 protein_coding
ENST00000567224 (WDR72-007) 53513741-53541103 processed_transcript
ENST00000567575 (WDR72-006) 53665692-53684627 processed_transcript
ENST00000614174 (WDR72-201) 53513742-53541080 protein_coding
ENSG00000169856 (ONECUT1)
one cut homeobox 1 		ENST00000305901 (ONECUT1-001) 52756989-52790012 protein_coding
ENST00000560699 (ONECUT1-003) 52757440-52781183 protein_coding
ENST00000561401 (ONECUT1-002) 52757315-52791078 processed_transcript
ENST00000570208 (ONECUT1-004) 52785725-52789396 nonsense_mediated_decay
ENSG00000214896 (RPSAP55)
ribosomal protein SA pseudogene 55 		ENST00000477347 (RPSAP55-001) 52885595-52886470 processed_pseudogene
ENSG00000259203 (RP11-209K10.2)
 ENST00000560818 (RP11-209K10.2-001) 52801614-52804942 lincRNA
ENSG00000259237 (RP11-209E8.1)
 ENST00000559915 (RP11-209E8.1-001) 53116365-53129698 lincRNA
ENSG00000259612 (EEF1A1P22)
eukaryotic translation elongation factor 1 alpha 1 pseudogene 22 		ENST00000559385 (EEF1A1P22-001) 52937139-52938518 processed_pseudogene
CIL_0007K3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ONECUT1 UCNEbase 10090 9:74115980-74893866
GeneTranscriptPositionBiotype
ENSMUSG00000043013 (Onecut1)
one cut domain, family member 1 		ENSMUST00000056006 (Onecut1-001) 74861921-74891781 protein_coding
ENSMUST00000160499 (Onecut1-002) 74866484-74890360 processed_transcript
ENSMUSG00000044976 (Wdr72)
WD repeat domain 72 		ENSMUST00000055879 (Wdr72-002) 74110356-74283203 protein_coding
ENSMUST00000098564 (Wdr72-001) 74110356-74142880 processed_transcript
ENSMUST00000149439 (Wdr72-003) 74274134-74283308 processed_transcript
ENSMUST00000184725 (Wdr72-005) 74110404-74113679 processed_transcript
ENSMUSG00000066477 (Gm16551)
predicted gene 16551 		ENSMUST00000160017 (Gm16551-003) 74848526-74852872 lincRNA
ENSMUST00000160842 (Gm16551-004) 74848995-74851204 retained_intron
ENSMUST00000160979 (Gm16551-001) 74847983-74852873 lincRNA
ENSMUST00000161862 (Gm16551-002) 74848437-74860134 lincRNA
ENSMUST00000162089 (Gm16551-005) 74848503-74849367 retained_intron
ENSMUSG00000093662 (Gm20649)
predicted gene 20649 		ENSMUST00000160950 (Gm20649-001) 74848463-74891476 lincRNA
ENSMUSG00000098272 (Gm27233)
predicted gene 27233 		ENSMUST00000184030 (Gm27233-001) 74709262-74709568 processed_pseudogene
ENSMUSG00000101596 (RP23-157H17.3)
predicted gene 28182 		ENSMUST00000188354 (RP23-157H17.3-001) 74852909-74855385 lincRNA
CIL_0007K3_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ONECUT1 UCNEbase 7955 18:36847319-37199395
GeneTranscriptPositionBiotype
ENSDARG00000007982 (onecut1)
one cut domain, family member 1 		ENSDART00000010177 (onecut1-001) 37192312-37197560 protein_coding
ENSDARG00000074442 (alx4b)
aristaless-like homeobox 4b 		ENSDART00000111260 (alx4b-201) 36758328-36998792 protein_coding
ENSDART00000132534 (alx4b-001) 36758328-36801751 protein_coding
ENSDARG00000093233 (si:ch211-215d8.2)
si:ch211-215d8.2 		ENSDART00000143735 (si:ch211-215d8.2-001) 37186836-37191791 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007K3_0001ENSG00000166415ENST00000360509ENST00000396328ENST00000557913ENST00000559418ENST00000560036ENST00000567224ENST00000567575ENST00000614174ENSG00000169856ENST00000305901ENST00000560699ENST00000561401ENST00000570208ENSG00000214896ENST00000477347ENSG00000259203ENST00000560818ENSG00000259237ENST00000559915ENSG00000259612ENST00000559385CIL_0007K3_0002ENSMUSG00000043013ENSMUST00000056006ENSMUST00000160499ENSMUSG00000044976ENSMUST00000055879ENSMUST00000098564ENSMUST00000149439ENSMUST00000184725ENSMUSG00000066477ENSMUST00000160017ENSMUST00000160842ENSMUST00000160979ENSMUST00000161862ENSMUST00000162089ENSMUSG00000093662ENSMUST00000160950ENSMUSG00000098272ENSMUST00000184030ENSMUSG00000101596ENSMUST00000188354CIL_0007K3_0003ENSDARG00000007982ENSDART00000010177ENSDARG00000074442ENSDART00000111260ENSDART00000132534ENSDARG00000093233ENSDART00000143735
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007K3_0001ENSG00000166415ENST00000360509ENST00000557913ENST00000559418ENST00000560036ENST00000567224ENST00000567575ENST00000614174ENSG00000169856ENST00000305901ENST00000560699ENST00000561401ENSG00000214896ENST00000477347ENSG00000259203ENST00000560818ENSG00000259237ENST00000559915ENSG00000259612ENST00000559385CIL_0007K3_0002ENSMUSG00000043013ENSMUST00000056006ENSMUST00000160499ENSMUSG00000044976ENSMUST00000055879ENSMUST00000098564ENSMUST00000149439ENSMUST00000184725ENSMUSG00000066477ENSMUST00000160017ENSMUST00000160979ENSMUSG00000093662ENSMUST00000160950ENSMUSG00000098272ENSMUST00000184030ENSMUSG00000101596ENSMUST00000188354CIL_0007K3_0003ENSDARG00000007982ENSDART00000010177ENSDARG00000074442ENSDART00000111260ENSDART00000132534ENSDARG00000093233ENSDART00000143735
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166415 ENST00000360509 N/A N/A 10.283±0.00 0.004±0.00 N/A 0.010±0.00 N/A 6.986±2.14 2.333±0.00 0.053±0.00 N/A 0.245±0.18 0.015±0.00 0.156±0.06
ENST00000396328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557913 N/A N/A N/A 0.013±0.01 N/A 0.010±0.00 N/A N/A N/A 0.009±0.00 N/A 0.175±0.02 0.015±0.00 N/A
ENST00000559418 N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560036 N/A N/A N/A 0.052±0.00 0.005±0.00 N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A
ENST00000567224 N/A N/A N/A 0.009±0.00 N/A N/A N/A N/A N/A N/A N/A 0.276±0.26 0.049±0.00 N/A
ENST00000567575 0.112±0.00 0.234±0.00 N/A 0.052±0.00 N/A N/A 0.042±0.00 N/A N/A 0.300±0.00 N/A N/A 0.351±0.00 N/A
ENST00000614174 N/A N/A N/A N/A 0.010±0.00 0.019±0.00 0.005±0.00 N/A 0.071±0.00 N/A N/A 0.050±0.00 0.083±0.06 0.131±0.06
ENSG00000169856 ENST00000305901 N/A N/A N/A 0.017±0.01 N/A 0.040±0.00 0.026±0.02 0.044±0.00 N/A N/A N/A 0.135±0.00 N/A 0.404±0.03
ENST00000560699 N/A N/A N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00
ENST00000561401 0.044±0.00 N/A N/A 0.100±0.00 N/A N/A N/A N/A N/A 0.103±0.00 N/A 0.121±0.00 N/A N/A
ENST00000570208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214896 ENST00000477347 0.018±0.00 0.075±0.00 N/A 0.020±0.00 0.058±0.00 0.018±0.00 N/A 0.042±0.02 0.017±0.00 0.018±0.00 0.016±0.00 N/A 0.038±0.00 0.028±0.01
ENSG00000259203 ENST00000560818 N/A N/A N/A N/A N/A N/A N/A N/A 1.022±0.00 N/A N/A 0.106±0.00 N/A 0.348±0.04
ENSG00000259237 ENST00000559915 0.109±0.00 N/A N/A N/A N/A 0.060±0.00 N/A N/A N/A N/A N/A 0.054±0.00 N/A N/A
ENSG00000259612 ENST00000559385 0.849±0.00 0.653±0.00 0.042±0.00 0.222±0.00 0.316±0.28 0.449±0.39 0.099±0.00 0.604±0.02 0.064±0.02 0.774±0.00 0.155±0.00 0.331±0.18 0.534±0.23 0.360±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043013 ENSMUST00000056006 0.007±0.00 0.014±0.01 0.006±0.00 0.125±0.00 0.050±0.00 0.031±0.01 N/A 0.007±0.00 9.538±5.12 N/A N/A 0.100±0.04 0.088±0.08 0.074±0.02
ENSMUST00000160499 N/A N/A N/A N/A N/A 0.236±0.00 N/A N/A 7.676±3.52 N/A N/A 0.054±0.00 N/A N/A
ENSMUSG00000044976 ENSMUST00000055879 0.246±0.00 N/A 0.495±0.06 0.041±0.01 0.025±0.01 0.143±0.03 0.047±0.04 2.497±1.70 0.522±0.68 0.200±0.10 0.007±0.00 0.133±0.07 0.207±0.10 0.029±0.01
ENSMUST00000098564 N/A N/A N/A N/A N/A 0.084±0.00 0.029±0.00 N/A 0.012±0.00 N/A N/A 0.270±0.00 N/A N/A
ENSMUST00000149439 0.022±0.00 N/A 0.254±0.00 0.052±0.01 0.043±0.00 N/A N/A N/A N/A 0.556±0.00 0.020±0.01 N/A N/A 0.049±0.00
ENSMUST00000184725 0.169±0.00 N/A N/A N/A 0.120±0.08 N/A N/A N/A 0.472±0.47 0.104±0.00 N/A 0.137±0.05 N/A 0.059±0.00
ENSMUSG00000066477 ENSMUST00000160017 N/A N/A N/A N/A N/A N/A N/A N/A 12.476±11.67 N/A N/A N/A N/A N/A
ENSMUST00000160842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160979 0.087±0.02 0.131±0.04 0.010±0.00 0.519±0.42 0.212±0.17 0.044±0.02 0.059±0.03 0.043±0.02 11.157±0.00 0.110±0.07 N/A 0.763±0.36 0.043±0.03 0.093±0.04
ENSMUST00000161862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000093662 ENSMUST00000160950 N/A N/A 0.007±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A
ENSMUSG00000098272 ENSMUST00000184030 N/A N/A N/A 0.055±0.00 N/A N/A N/A N/A 0.241±0.07 N/A N/A N/A N/A N/A
ENSMUSG00000101596 ENSMUST00000188354 N/A N/A N/A 0.086±0.00 N/A 0.037±0.01 N/A N/A 0.188±0.20 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007982 ENSDART00000010177 N/A N/A N/A 1.218±0.82 N/A N/A N/A 0.079±0.00 0.144±0.00 N/A 0.112±0.00 N/A N/A N/A
ENSDARG00000074442 ENSDART00000111260 N/A N/A N/A 0.028±0.00 N/A N/A 0.085±0.03 0.464±0.27 N/A N/A N/A N/A N/A N/A
ENSDART00000132534 N/A N/A N/A N/A N/A N/A 0.337±0.08 0.312±0.03 N/A N/A 0.067±0.00 N/A N/A N/A
ENSDARG00000093233 ENSDART00000143735 N/A N/A N/A 2.438±0.75 N/A N/A 0.130±0.00 N/A N/A N/A N/A N/A N/A N/A

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