Institute of Cardiovascular Regeneration Webtool Repository

Region Summary

Source ID	Type	Tax ID	Position
FBXO8	UCNEbase	9606	4:173652005-174199072
Gene	Transcript	Position	Biotype
ENSG00000248174 (RP11-148L24.1)	ENST00000503140 (RP11-148L24.1-002)	174097755-174120517	lincRNA
ENSG00000248174 (RP11-148L24.1)	ENST00000515444 (RP11-148L24.1-001)	174094660-174220398	lincRNA
ENSG00000250043 (RP11-161D15.2)	ENST00000502956 (RP11-161D15.2-001)	173896394-173911895	lincRNA
ENSG00000250043 (RP11-161D15.2)	ENST00000515825 (RP11-161D15.2-002)	173877471-173913252	lincRNA
ENSG00000250708 (RP11-161D15.1)	ENST00000509968 (RP11-161D15.1-002)	173897252-173929431	lincRNA
ENSG00000250708 (RP11-161D15.1)	ENST00000512263 (RP11-161D15.1-001)	173897273-173929525	lincRNA
ENSG00000250957 (RP11-248N22.1)	ENST00000511346 (RP11-248N22.1-001)	174135055-174154637	lincRNA
ENSG00000251213 (RP11-248N22.2)	ENST00000504167 (RP11-248N22.2-001)	174164441-174168913	lincRNA
ENSG00000251216 (RP11-161D15.3)	ENST00000503325 (RP11-161D15.3-002)	173982619-173990861	lincRNA
ENSG00000251216 (RP11-161D15.3)	ENST00000511291 (RP11-161D15.3-001)	173924207-173990851	lincRNA

CIL_0007KK_0002 (Click to Hide/Show)

Notice (8): Undefined index: CIL_0007KK_0002 [APP/View/Region/show.ctp, line 46]Code Context
        <tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
        <?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
	'region_arr' => array(
		'CIL_0007KK_0001' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	),
	'gene_desc_arr' => array(
		'ENSG00000248174' => null,
		'ENSG00000250043' => null,
		'ENSG00000250708' => null,
		'ENSG00000250957' => null,
		'ENSG00000251213' => null,
		'ENSG00000251216' => null,
		'ENSMUSG00000101485' => 'predicted gene 29173'
	),
	'gene_name_arr' => array(
		'ENSG00000248174' => 'RP11-148L24.1',
		'ENSG00000250043' => 'RP11-161D15.2',
		'ENSG00000250708' => 'RP11-161D15.1',
		'ENSG00000250957' => 'RP11-248N22.1',
		'ENSG00000251213' => 'RP11-248N22.2',
		'ENSG00000251216' => 'RP11-161D15.3',
		'ENSMUSG00000101485' => 'RP23-79K4.1'
	),
	'accession_table' => array(
		(int) 0 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 1 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 2 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		)
	),
	'all_tissues' => array(
		(int) 0 => 'Adipose',
		(int) 1 => 'Adrenal',
		(int) 2 => 'Brain',
		(int) 7 => 'Breast',
		(int) 8 => 'Colon',
		(int) 14 => 'Heart',
		(int) 19 => 'Kidney',
		(int) 21 => 'Liver',
		(int) 24 => 'Lung',
		(int) 27 => 'Ovary',
		(int) 33 => 'Placenta',
		(int) 39 => 'Testis'
	),
	'column_titles' => array(
		(int) 0 => 'Region Sub-Accession',
		(int) 1 => 'Tax ID',
		(int) 2 => 'Position',
		(int) 3 => 'Region Length'
	),
	'geneviewer' => array(
		(int) 9606 => array(
			'version' => 'GRCh38',
			'coord_key' => 'Homo sapiens',
			'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCh38.2bit',
			'bwgURI' => '/static/files/GRCh38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 10090 => array(
			'version' => 'GRCm38',
			'coord_key' => 'Mus musculus',
			'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCm38.2bit',
			'bwgURI' => '/static/files/GRCm38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 7955 => array(
			'version' => 'Zv9',
			'coord_key' => 'Danio rerio',
			'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
			'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
			'twoBitURI' => '/static/files/Zv9.2bit',
			'bwgURI' => '/static/files/Zv9.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		)
	),
	'transcript_count' => (int) 11,
	'longest_tissue_len' => (int) 8,
	'transcript_data' => array(
		'ENST00000503140' => array(
			'start' => '174097755',
			'end' => '174120517',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-148L24.1-002'
		),
		'ENST00000515444' => array(
			'start' => '174094660',
			'end' => '174220398',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-148L24.1-001'
		),
		'ENST00000502956' => array(
			'start' => '173896394',
			'end' => '173911895',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.2-001'
		),
		'ENST00000515825' => array(
			'start' => '173877471',
			'end' => '173913252',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.2-002'
		),
		'ENST00000509968' => array(
			'start' => '173897252',
			'end' => '173929431',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.1-002'
		),
		'ENST00000512263' => array(
			'start' => '173897273',
			'end' => '173929525',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.1-001'
		),
		'ENST00000511346' => array(
			'start' => '174135055',
			'end' => '174154637',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-248N22.1-001'
		),
		'ENST00000504167' => array(
			'start' => '174164441',
			'end' => '174168913',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-248N22.2-001'
		),
		'ENST00000503325' => array(
			'start' => '173982619',
			'end' => '173990861',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.3-002'
		),
		'ENST00000511291' => array(
			'start' => '173924207',
			'end' => '173990851',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.3-001'
		),
		'ENSMUST00000190897' => array(
			'start' => '56674370',
			'end' => '56675706',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP23-79K4.1-001'
		)
	),
	'accession_map' => array(
		'ENST000' => '9606',
		'ENSMUST' => '10090',
		'ENSDART' => '7955',
		'ENSG000' => '9606',
		'ENSMUSG' => '10090',
		'ENSDARG' => '7955'
	),
	'sci_name_map' => array(
		(int) 9606 => 'Homo_sapiens',
		(int) 10090 => 'Mus_musculus',
		(int) 7955 => 'Danio_rerio'
	),
	'UCSC_links' => array(
		(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
		(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
		(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
	),
	'expressed_region_arr' => array(
		'CIL_0007KK_0001' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	)
)
$region_arr = array(
	'CIL_0007KK_0001' => array(
		'genes_in_region' => array(
			'ENSG00000248174' => array(
				[maximum depth reached]
			),
			'ENSG00000250043' => array(
				[maximum depth reached]
			),
			'ENSG00000250708' => array(
				[maximum depth reached]
			),
			'ENSG00000250957' => array(
				[maximum depth reached]
			),
			'ENSG00000251213' => array(
				[maximum depth reached]
			),
			'ENSG00000251216' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Brain',
			(int) 1 => 'Colon',
			(int) 2 => 'Heart',
			(int) 3 => 'Kidney',
			(int) 4 => 'Ovary',
			(int) 5 => 'Placenta',
			(int) 6 => 'Testis',
			(int) 7 => 'Adipose',
			(int) 8 => 'Adrenal',
			(int) 9 => 'Brain',
			(int) 10 => 'Breast',
			(int) 11 => 'Colon',
			(int) 12 => 'Kidney',
			(int) 13 => 'Liver',
			(int) 14 => 'Lung',
			(int) 15 => 'Ovary',
			(int) 16 => 'Placenta',
			(int) 17 => 'Testis',
			(int) 18 => 'Heart',
			(int) 19 => 'Placenta',
			(int) 20 => 'Testis',
			(int) 21 => 'Testis',
			(int) 22 => 'Brain',
			(int) 23 => 'Colon',
			(int) 24 => 'Ovary',
			(int) 25 => 'Testis',
			(int) 26 => 'Colon',
			(int) 27 => 'Heart',
			(int) 28 => 'Lung',
			(int) 29 => 'Ovary',
			(int) 30 => 'Testis',
			(int) 31 => 'Colon',
			(int) 32 => 'Heart',
			(int) 33 => 'Liver',
			(int) 34 => 'Ovary',
			(int) 35 => 'Placenta',
			(int) 36 => 'Testis',
			(int) 37 => 'Placenta',
			(int) 38 => 'Brain',
			(int) 39 => 'Brain',
			(int) 40 => 'Colon',
			(int) 41 => 'Heart',
			(int) 42 => 'Liver',
			(int) 43 => 'Lung',
			(int) 44 => 'Ovary',
			(int) 45 => 'Placenta',
			(int) 46 => 'Testis'
		)
	)
)
$gene_desc_arr = array(
	'ENSG00000248174' => null,
	'ENSG00000250043' => null,
	'ENSG00000250708' => null,
	'ENSG00000250957' => null,
	'ENSG00000251213' => null,
	'ENSG00000251216' => null,
	'ENSMUSG00000101485' => 'predicted gene 29173'
)
$gene_name_arr = array(
	'ENSG00000248174' => 'RP11-148L24.1',
	'ENSG00000250043' => 'RP11-161D15.2',
	'ENSG00000250708' => 'RP11-161D15.1',
	'ENSG00000250957' => 'RP11-248N22.1',
	'ENSG00000251213' => 'RP11-248N22.2',
	'ENSG00000251216' => 'RP11-161D15.3',
	'ENSMUSG00000101485' => 'RP23-79K4.1'
)
$accession_table = array(
	(int) 0 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007KK_0001',
			'tax_id' => '9606',
			'chromosome' => '4',
			'seq_start' => '173652005',
			'seq_end' => '174199072',
			'region_length' => '547067',
			'region_type' => 'UCNEbase',
			'el_id' => 'FBXO8'
		)
	),
	(int) 1 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007KK_0002',
			'tax_id' => '10090',
			'chromosome' => '8',
			'seq_start' => '56639407',
			'seq_end' => '57214647',
			'region_length' => '575240',
			'region_type' => 'UCNEbase',
			'el_id' => 'FBXO8'
		)
	),
	(int) 2 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007KK_0003',
			'tax_id' => '7955',
			'chromosome' => '1',
			'seq_start' => '38719454',
			'seq_end' => '38748302',
			'region_length' => '28848',
			'region_type' => 'UCNEbase',
			'el_id' => 'FBXO8'
		)
	)
)
$all_tissues = array(
	(int) 0 => 'Adipose',
	(int) 1 => 'Adrenal',
	(int) 2 => 'Brain',
	(int) 7 => 'Breast',
	(int) 8 => 'Colon',
	(int) 14 => 'Heart',
	(int) 19 => 'Kidney',
	(int) 21 => 'Liver',
	(int) 24 => 'Lung',
	(int) 27 => 'Ovary',
	(int) 33 => 'Placenta',
	(int) 39 => 'Testis'
)
$column_titles = array(
	(int) 0 => 'Region Sub-Accession',
	(int) 1 => 'Tax ID',
	(int) 2 => 'Position',
	(int) 3 => 'Region Length'
)
$geneviewer = array(
	(int) 9606 => array(
		'version' => 'GRCh38',
		'coord_key' => 'Homo sapiens',
		'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCh38.2bit',
		'bwgURI' => '/static/files/GRCh38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 10090 => array(
		'version' => 'GRCm38',
		'coord_key' => 'Mus musculus',
		'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCm38.2bit',
		'bwgURI' => '/static/files/GRCm38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 7955 => array(
		'version' => 'Zv9',
		'coord_key' => 'Danio rerio',
		'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
		'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
		'twoBitURI' => '/static/files/Zv9.2bit',
		'bwgURI' => '/static/files/Zv9.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	)
)
$transcript_count = (int) 11
$longest_tissue_len = (int) 8
$transcript_data = array(
	'ENST00000503140' => array(
		'start' => '174097755',
		'end' => '174120517',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-148L24.1-002'
	),
	'ENST00000515444' => array(
		'start' => '174094660',
		'end' => '174220398',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-148L24.1-001'
	),
	'ENST00000502956' => array(
		'start' => '173896394',
		'end' => '173911895',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.2-001'
	),
	'ENST00000515825' => array(
		'start' => '173877471',
		'end' => '173913252',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.2-002'
	),
	'ENST00000509968' => array(
		'start' => '173897252',
		'end' => '173929431',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.1-002'
	),
	'ENST00000512263' => array(
		'start' => '173897273',
		'end' => '173929525',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.1-001'
	),
	'ENST00000511346' => array(
		'start' => '174135055',
		'end' => '174154637',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-248N22.1-001'
	),
	'ENST00000504167' => array(
		'start' => '174164441',
		'end' => '174168913',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-248N22.2-001'
	),
	'ENST00000503325' => array(
		'start' => '173982619',
		'end' => '173990861',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.3-002'
	),
	'ENST00000511291' => array(
		'start' => '173924207',
		'end' => '173990851',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.3-001'
	),
	'ENSMUST00000190897' => array(
		'start' => '56674370',
		'end' => '56675706',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP23-79K4.1-001'
	)
)
$accession_map = array(
	'ENST000' => '9606',
	'ENSMUST' => '10090',
	'ENSDART' => '7955',
	'ENSG000' => '9606',
	'ENSMUSG' => '10090',
	'ENSDARG' => '7955'
)
$sci_name_map = array(
	(int) 9606 => 'Homo_sapiens',
	(int) 10090 => 'Mus_musculus',
	(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
	(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
	(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
	(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
	'CIL_0007KK_0001' => array(
		'genes_in_region' => array(
			'ENSG00000248174' => array(
				[maximum depth reached]
			),
			'ENSG00000250043' => array(
				[maximum depth reached]
			),
			'ENSG00000250708' => array(
				[maximum depth reached]
			),
			'ENSG00000250957' => array(
				[maximum depth reached]
			),
			'ENSG00000251213' => array(
				[maximum depth reached]
			),
			'ENSG00000251216' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Brain',
			(int) 1 => 'Colon',
			(int) 2 => 'Heart',
			(int) 3 => 'Kidney',
			(int) 4 => 'Ovary',
			(int) 5 => 'Placenta',
			(int) 6 => 'Testis',
			(int) 7 => 'Adipose',
			(int) 8 => 'Adrenal',
			(int) 9 => 'Brain',
			(int) 10 => 'Breast',
			(int) 11 => 'Colon',
			(int) 12 => 'Kidney',
			(int) 13 => 'Liver',
			(int) 14 => 'Lung',
			(int) 15 => 'Ovary',
			(int) 16 => 'Placenta',
			(int) 17 => 'Testis',
			(int) 18 => 'Heart',
			(int) 19 => 'Placenta',
			(int) 20 => 'Testis',
			(int) 21 => 'Testis',
			(int) 22 => 'Brain',
			(int) 23 => 'Colon',
			(int) 24 => 'Ovary',
			(int) 25 => 'Testis',
			(int) 26 => 'Colon',
			(int) 27 => 'Heart',
			(int) 28 => 'Lung',
			(int) 29 => 'Ovary',
			(int) 30 => 'Testis',
			(int) 31 => 'Colon',
			(int) 32 => 'Heart',
			(int) 33 => 'Liver',
			(int) 34 => 'Ovary',
			(int) 35 => 'Placenta',
			(int) 36 => 'Testis',
			(int) 37 => 'Placenta',
			(int) 38 => 'Brain',
			(int) 39 => 'Brain',
			(int) 40 => 'Colon',
			(int) 41 => 'Heart',
			(int) 42 => 'Liver',
			(int) 43 => 'Lung',
			(int) 44 => 'Ovary',
			(int) 45 => 'Placenta',
			(int) 46 => 'Testis'
		)
	)
)
$accession = array(
	'region_elements' => array(
		'region_element_id' => 'CIL_0007KK_0002',
		'tax_id' => '10090',
		'chromosome' => '8',
		'seq_start' => '56639407',
		'seq_end' => '57214647',
		'region_length' => '575240',
		'region_type' => 'UCNEbase',
		'el_id' => 'FBXO8'
	)
)
$gene_el = array(
	'ENST00000503325' => array(
		'Brain' => array(
			'average_FPKM' => '0.050',
			'stddev_FPKM' => '0.00'
		)
	),
	'ENST00000511291' => array(
		'Brain' => array(
			'average_FPKM' => '0.006',
			'stddev_FPKM' => '0.00'
		),
		'Colon' => array(
			'average_FPKM' => '0.056',
			'stddev_FPKM' => '0.00'
		),
		'Heart' => array(
			'average_FPKM' => '0.146',
			'stddev_FPKM' => '0.08'
		),
		'Liver' => array(
			'average_FPKM' => '0.005',
			'stddev_FPKM' => '0.00'
		),
		'Lung' => array(
			'average_FPKM' => '0.013',
			'stddev_FPKM' => '0.01'
		),
		'Ovary' => array(
			'average_FPKM' => '0.032',
			'stddev_FPKM' => '0.00'
		),
		'Placenta' => array(
			'average_FPKM' => '0.119',
			'stddev_FPKM' => '0.06'
		),
		'Testis' => array(
			'average_FPKM' => '0.284',
			'stddev_FPKM' => '0.23'
		)
	)
)
$gene_key = 'ENSG00000251216'
$is_first = false
$tran_el = array(
	'Brain' => array(
		'average_FPKM' => '0.006',
		'stddev_FPKM' => '0.00'
	),
	'Colon' => array(
		'average_FPKM' => '0.056',
		'stddev_FPKM' => '0.00'
	),
	'Heart' => array(
		'average_FPKM' => '0.146',
		'stddev_FPKM' => '0.08'
	),
	'Liver' => array(
		'average_FPKM' => '0.005',
		'stddev_FPKM' => '0.00'
	),
	'Lung' => array(
		'average_FPKM' => '0.013',
		'stddev_FPKM' => '0.01'
	),
	'Ovary' => array(
		'average_FPKM' => '0.032',
		'stddev_FPKM' => '0.00'
	),
	'Placenta' => array(
		'average_FPKM' => '0.119',
		'stddev_FPKM' => '0.06'
	),
	'Testis' => array(
		'average_FPKM' => '0.284',
		'stddev_FPKM' => '0.23'
	)
)
$tran_key = 'ENST00000511291'
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]Code Context
        <tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
        <?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
	'region_arr' => array(
		'CIL_0007KK_0001' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	),
	'gene_desc_arr' => array(
		'ENSG00000248174' => null,
		'ENSG00000250043' => null,
		'ENSG00000250708' => null,
		'ENSG00000250957' => null,
		'ENSG00000251213' => null,
		'ENSG00000251216' => null,
		'ENSMUSG00000101485' => 'predicted gene 29173'
	),
	'gene_name_arr' => array(
		'ENSG00000248174' => 'RP11-148L24.1',
		'ENSG00000250043' => 'RP11-161D15.2',
		'ENSG00000250708' => 'RP11-161D15.1',
		'ENSG00000250957' => 'RP11-248N22.1',
		'ENSG00000251213' => 'RP11-248N22.2',
		'ENSG00000251216' => 'RP11-161D15.3',
		'ENSMUSG00000101485' => 'RP23-79K4.1'
	),
	'accession_table' => array(
		(int) 0 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 1 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 2 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		)
	),
	'all_tissues' => array(
		(int) 0 => 'Adipose',
		(int) 1 => 'Adrenal',
		(int) 2 => 'Brain',
		(int) 7 => 'Breast',
		(int) 8 => 'Colon',
		(int) 14 => 'Heart',
		(int) 19 => 'Kidney',
		(int) 21 => 'Liver',
		(int) 24 => 'Lung',
		(int) 27 => 'Ovary',
		(int) 33 => 'Placenta',
		(int) 39 => 'Testis'
	),
	'column_titles' => array(
		(int) 0 => 'Region Sub-Accession',
		(int) 1 => 'Tax ID',
		(int) 2 => 'Position',
		(int) 3 => 'Region Length'
	),
	'geneviewer' => array(
		(int) 9606 => array(
			'version' => 'GRCh38',
			'coord_key' => 'Homo sapiens',
			'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCh38.2bit',
			'bwgURI' => '/static/files/GRCh38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 10090 => array(
			'version' => 'GRCm38',
			'coord_key' => 'Mus musculus',
			'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCm38.2bit',
			'bwgURI' => '/static/files/GRCm38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 7955 => array(
			'version' => 'Zv9',
			'coord_key' => 'Danio rerio',
			'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
			'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
			'twoBitURI' => '/static/files/Zv9.2bit',
			'bwgURI' => '/static/files/Zv9.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		)
	),
	'transcript_count' => (int) 11,
	'longest_tissue_len' => (int) 8,
	'transcript_data' => array(
		'ENST00000503140' => array(
			'start' => '174097755',
			'end' => '174120517',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-148L24.1-002'
		),
		'ENST00000515444' => array(
			'start' => '174094660',
			'end' => '174220398',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-148L24.1-001'
		),
		'ENST00000502956' => array(
			'start' => '173896394',
			'end' => '173911895',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.2-001'
		),
		'ENST00000515825' => array(
			'start' => '173877471',
			'end' => '173913252',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.2-002'
		),
		'ENST00000509968' => array(
			'start' => '173897252',
			'end' => '173929431',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.1-002'
		),
		'ENST00000512263' => array(
			'start' => '173897273',
			'end' => '173929525',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.1-001'
		),
		'ENST00000511346' => array(
			'start' => '174135055',
			'end' => '174154637',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-248N22.1-001'
		),
		'ENST00000504167' => array(
			'start' => '174164441',
			'end' => '174168913',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-248N22.2-001'
		),
		'ENST00000503325' => array(
			'start' => '173982619',
			'end' => '173990861',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.3-002'
		),
		'ENST00000511291' => array(
			'start' => '173924207',
			'end' => '173990851',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.3-001'
		),
		'ENSMUST00000190897' => array(
			'start' => '56674370',
			'end' => '56675706',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP23-79K4.1-001'
		)
	),
	'accession_map' => array(
		'ENST000' => '9606',
		'ENSMUST' => '10090',
		'ENSDART' => '7955',
		'ENSG000' => '9606',
		'ENSMUSG' => '10090',
		'ENSDARG' => '7955'
	),
	'sci_name_map' => array(
		(int) 9606 => 'Homo_sapiens',
		(int) 10090 => 'Mus_musculus',
		(int) 7955 => 'Danio_rerio'
	),
	'UCSC_links' => array(
		(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
		(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
		(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
	),
	'expressed_region_arr' => array(
		'CIL_0007KK_0001' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	)
)
$region_arr = array(
	'CIL_0007KK_0001' => array(
		'genes_in_region' => array(
			'ENSG00000248174' => array(
				[maximum depth reached]
			),
			'ENSG00000250043' => array(
				[maximum depth reached]
			),
			'ENSG00000250708' => array(
				[maximum depth reached]
			),
			'ENSG00000250957' => array(
				[maximum depth reached]
			),
			'ENSG00000251213' => array(
				[maximum depth reached]
			),
			'ENSG00000251216' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Brain',
			(int) 1 => 'Colon',
			(int) 2 => 'Heart',
			(int) 3 => 'Kidney',
			(int) 4 => 'Ovary',
			(int) 5 => 'Placenta',
			(int) 6 => 'Testis',
			(int) 7 => 'Adipose',
			(int) 8 => 'Adrenal',
			(int) 9 => 'Brain',
			(int) 10 => 'Breast',
			(int) 11 => 'Colon',
			(int) 12 => 'Kidney',
			(int) 13 => 'Liver',
			(int) 14 => 'Lung',
			(int) 15 => 'Ovary',
			(int) 16 => 'Placenta',
			(int) 17 => 'Testis',
			(int) 18 => 'Heart',
			(int) 19 => 'Placenta',
			(int) 20 => 'Testis',
			(int) 21 => 'Testis',
			(int) 22 => 'Brain',
			(int) 23 => 'Colon',
			(int) 24 => 'Ovary',
			(int) 25 => 'Testis',
			(int) 26 => 'Colon',
			(int) 27 => 'Heart',
			(int) 28 => 'Lung',
			(int) 29 => 'Ovary',
			(int) 30 => 'Testis',
			(int) 31 => 'Colon',
			(int) 32 => 'Heart',
			(int) 33 => 'Liver',
			(int) 34 => 'Ovary',
			(int) 35 => 'Placenta',
			(int) 36 => 'Testis',
			(int) 37 => 'Placenta',
			(int) 38 => 'Brain',
			(int) 39 => 'Brain',
			(int) 40 => 'Colon',
			(int) 41 => 'Heart',
			(int) 42 => 'Liver',
			(int) 43 => 'Lung',
			(int) 44 => 'Ovary',
			(int) 45 => 'Placenta',
			(int) 46 => 'Testis'
		)
	)
)
$gene_desc_arr = array(
	'ENSG00000248174' => null,
	'ENSG00000250043' => null,
	'ENSG00000250708' => null,
	'ENSG00000250957' => null,
	'ENSG00000251213' => null,
	'ENSG00000251216' => null,
	'ENSMUSG00000101485' => 'predicted gene 29173'
)
$gene_name_arr = array(
	'ENSG00000248174' => 'RP11-148L24.1',
	'ENSG00000250043' => 'RP11-161D15.2',
	'ENSG00000250708' => 'RP11-161D15.1',
	'ENSG00000250957' => 'RP11-248N22.1',
	'ENSG00000251213' => 'RP11-248N22.2',
	'ENSG00000251216' => 'RP11-161D15.3',
	'ENSMUSG00000101485' => 'RP23-79K4.1'
)
$accession_table = array(
	(int) 0 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007KK_0001',
			'tax_id' => '9606',
			'chromosome' => '4',
			'seq_start' => '173652005',
			'seq_end' => '174199072',
			'region_length' => '547067',
			'region_type' => 'UCNEbase',
			'el_id' => 'FBXO8'
		)
	),
	(int) 1 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007KK_0002',
			'tax_id' => '10090',
			'chromosome' => '8',
			'seq_start' => '56639407',
			'seq_end' => '57214647',
			'region_length' => '575240',
			'region_type' => 'UCNEbase',
			'el_id' => 'FBXO8'
		)
	),
	(int) 2 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007KK_0003',
			'tax_id' => '7955',
			'chromosome' => '1',
			'seq_start' => '38719454',
			'seq_end' => '38748302',
			'region_length' => '28848',
			'region_type' => 'UCNEbase',
			'el_id' => 'FBXO8'
		)
	)
)
$all_tissues = array(
	(int) 0 => 'Adipose',
	(int) 1 => 'Adrenal',
	(int) 2 => 'Brain',
	(int) 7 => 'Breast',
	(int) 8 => 'Colon',
	(int) 14 => 'Heart',
	(int) 19 => 'Kidney',
	(int) 21 => 'Liver',
	(int) 24 => 'Lung',
	(int) 27 => 'Ovary',
	(int) 33 => 'Placenta',
	(int) 39 => 'Testis'
)
$column_titles = array(
	(int) 0 => 'Region Sub-Accession',
	(int) 1 => 'Tax ID',
	(int) 2 => 'Position',
	(int) 3 => 'Region Length'
)
$geneviewer = array(
	(int) 9606 => array(
		'version' => 'GRCh38',
		'coord_key' => 'Homo sapiens',
		'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCh38.2bit',
		'bwgURI' => '/static/files/GRCh38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 10090 => array(
		'version' => 'GRCm38',
		'coord_key' => 'Mus musculus',
		'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCm38.2bit',
		'bwgURI' => '/static/files/GRCm38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 7955 => array(
		'version' => 'Zv9',
		'coord_key' => 'Danio rerio',
		'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
		'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
		'twoBitURI' => '/static/files/Zv9.2bit',
		'bwgURI' => '/static/files/Zv9.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	)
)
$transcript_count = (int) 11
$longest_tissue_len = (int) 8
$transcript_data = array(
	'ENST00000503140' => array(
		'start' => '174097755',
		'end' => '174120517',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-148L24.1-002'
	),
	'ENST00000515444' => array(
		'start' => '174094660',
		'end' => '174220398',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-148L24.1-001'
	),
	'ENST00000502956' => array(
		'start' => '173896394',
		'end' => '173911895',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.2-001'
	),
	'ENST00000515825' => array(
		'start' => '173877471',
		'end' => '173913252',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.2-002'
	),
	'ENST00000509968' => array(
		'start' => '173897252',
		'end' => '173929431',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.1-002'
	),
	'ENST00000512263' => array(
		'start' => '173897273',
		'end' => '173929525',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.1-001'
	),
	'ENST00000511346' => array(
		'start' => '174135055',
		'end' => '174154637',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-248N22.1-001'
	),
	'ENST00000504167' => array(
		'start' => '174164441',
		'end' => '174168913',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-248N22.2-001'
	),
	'ENST00000503325' => array(
		'start' => '173982619',
		'end' => '173990861',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.3-002'
	),
	'ENST00000511291' => array(
		'start' => '173924207',
		'end' => '173990851',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.3-001'
	),
	'ENSMUST00000190897' => array(
		'start' => '56674370',
		'end' => '56675706',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP23-79K4.1-001'
	)
)
$accession_map = array(
	'ENST000' => '9606',
	'ENSMUST' => '10090',
	'ENSDART' => '7955',
	'ENSG000' => '9606',
	'ENSMUSG' => '10090',
	'ENSDARG' => '7955'
)
$sci_name_map = array(
	(int) 9606 => 'Homo_sapiens',
	(int) 10090 => 'Mus_musculus',
	(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
	(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
	(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
	(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
	'CIL_0007KK_0001' => array(
		'genes_in_region' => array(
			'ENSG00000248174' => array(
				[maximum depth reached]
			),
			'ENSG00000250043' => array(
				[maximum depth reached]
			),
			'ENSG00000250708' => array(
				[maximum depth reached]
			),
			'ENSG00000250957' => array(
				[maximum depth reached]
			),
			'ENSG00000251213' => array(
				[maximum depth reached]
			),
			'ENSG00000251216' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Brain',
			(int) 1 => 'Colon',
			(int) 2 => 'Heart',
			(int) 3 => 'Kidney',
			(int) 4 => 'Ovary',
			(int) 5 => 'Placenta',
			(int) 6 => 'Testis',
			(int) 7 => 'Adipose',
			(int) 8 => 'Adrenal',
			(int) 9 => 'Brain',
			(int) 10 => 'Breast',
			(int) 11 => 'Colon',
			(int) 12 => 'Kidney',
			(int) 13 => 'Liver',
			(int) 14 => 'Lung',
			(int) 15 => 'Ovary',
			(int) 16 => 'Placenta',
			(int) 17 => 'Testis',
			(int) 18 => 'Heart',
			(int) 19 => 'Placenta',
			(int) 20 => 'Testis',
			(int) 21 => 'Testis',
			(int) 22 => 'Brain',
			(int) 23 => 'Colon',
			(int) 24 => 'Ovary',
			(int) 25 => 'Testis',
			(int) 26 => 'Colon',
			(int) 27 => 'Heart',
			(int) 28 => 'Lung',
			(int) 29 => 'Ovary',
			(int) 30 => 'Testis',
			(int) 31 => 'Colon',
			(int) 32 => 'Heart',
			(int) 33 => 'Liver',
			(int) 34 => 'Ovary',
			(int) 35 => 'Placenta',
			(int) 36 => 'Testis',
			(int) 37 => 'Placenta',
			(int) 38 => 'Brain',
			(int) 39 => 'Brain',
			(int) 40 => 'Colon',
			(int) 41 => 'Heart',
			(int) 42 => 'Liver',
			(int) 43 => 'Lung',
			(int) 44 => 'Ovary',
			(int) 45 => 'Placenta',
			(int) 46 => 'Testis'
		)
	)
)
$accession = array(
	'region_elements' => array(
		'region_element_id' => 'CIL_0007KK_0002',
		'tax_id' => '10090',
		'chromosome' => '8',
		'seq_start' => '56639407',
		'seq_end' => '57214647',
		'region_length' => '575240',
		'region_type' => 'UCNEbase',
		'el_id' => 'FBXO8'
	)
)
$gene_el = array(
	'ENST00000503325' => array(
		'Brain' => array(
			'average_FPKM' => '0.050',
			'stddev_FPKM' => '0.00'
		)
	),
	'ENST00000511291' => array(
		'Brain' => array(
			'average_FPKM' => '0.006',
			'stddev_FPKM' => '0.00'
		),
		'Colon' => array(
			'average_FPKM' => '0.056',
			'stddev_FPKM' => '0.00'
		),
		'Heart' => array(
			'average_FPKM' => '0.146',
			'stddev_FPKM' => '0.08'
		),
		'Liver' => array(
			'average_FPKM' => '0.005',
			'stddev_FPKM' => '0.00'
		),
		'Lung' => array(
			'average_FPKM' => '0.013',
			'stddev_FPKM' => '0.01'
		),
		'Ovary' => array(
			'average_FPKM' => '0.032',
			'stddev_FPKM' => '0.00'
		),
		'Placenta' => array(
			'average_FPKM' => '0.119',
			'stddev_FPKM' => '0.06'
		),
		'Testis' => array(
			'average_FPKM' => '0.284',
			'stddev_FPKM' => '0.23'
		)
	)
)
$gene_key = 'ENSG00000251216'
$is_first = false
$tran_el = array(
	'Brain' => array(
		'average_FPKM' => '0.006',
		'stddev_FPKM' => '0.00'
	),
	'Colon' => array(
		'average_FPKM' => '0.056',
		'stddev_FPKM' => '0.00'
	),
	'Heart' => array(
		'average_FPKM' => '0.146',
		'stddev_FPKM' => '0.08'
	),
	'Liver' => array(
		'average_FPKM' => '0.005',
		'stddev_FPKM' => '0.00'
	),
	'Lung' => array(
		'average_FPKM' => '0.013',
		'stddev_FPKM' => '0.01'
	),
	'Ovary' => array(
		'average_FPKM' => '0.032',
		'stddev_FPKM' => '0.00'
	),
	'Placenta' => array(
		'average_FPKM' => '0.119',
		'stddev_FPKM' => '0.06'
	),
	'Testis' => array(
		'average_FPKM' => '0.284',
		'stddev_FPKM' => '0.23'
	)
)
$tran_key = 'ENST00000511291'
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Source ID		Type	Tax ID	Position
FBXO8		UCNEbase	10090	8:56639407-57214647
Gene		Transcript	Position	Biotype

CIL_0007KK_0003 (Click to Hide/Show)

Notice (8): Undefined index: CIL_0007KK_0003 [APP/View/Region/show.ctp, line 46]Code Context
        <tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
        <?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
	'region_arr' => array(
		'CIL_0007KK_0001' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	),
	'gene_desc_arr' => array(
		'ENSG00000248174' => null,
		'ENSG00000250043' => null,
		'ENSG00000250708' => null,
		'ENSG00000250957' => null,
		'ENSG00000251213' => null,
		'ENSG00000251216' => null,
		'ENSMUSG00000101485' => 'predicted gene 29173'
	),
	'gene_name_arr' => array(
		'ENSG00000248174' => 'RP11-148L24.1',
		'ENSG00000250043' => 'RP11-161D15.2',
		'ENSG00000250708' => 'RP11-161D15.1',
		'ENSG00000250957' => 'RP11-248N22.1',
		'ENSG00000251213' => 'RP11-248N22.2',
		'ENSG00000251216' => 'RP11-161D15.3',
		'ENSMUSG00000101485' => 'RP23-79K4.1'
	),
	'accession_table' => array(
		(int) 0 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 1 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 2 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		)
	),
	'all_tissues' => array(
		(int) 0 => 'Adipose',
		(int) 1 => 'Adrenal',
		(int) 2 => 'Brain',
		(int) 7 => 'Breast',
		(int) 8 => 'Colon',
		(int) 14 => 'Heart',
		(int) 19 => 'Kidney',
		(int) 21 => 'Liver',
		(int) 24 => 'Lung',
		(int) 27 => 'Ovary',
		(int) 33 => 'Placenta',
		(int) 39 => 'Testis'
	),
	'column_titles' => array(
		(int) 0 => 'Region Sub-Accession',
		(int) 1 => 'Tax ID',
		(int) 2 => 'Position',
		(int) 3 => 'Region Length'
	),
	'geneviewer' => array(
		(int) 9606 => array(
			'version' => 'GRCh38',
			'coord_key' => 'Homo sapiens',
			'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCh38.2bit',
			'bwgURI' => '/static/files/GRCh38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 10090 => array(
			'version' => 'GRCm38',
			'coord_key' => 'Mus musculus',
			'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCm38.2bit',
			'bwgURI' => '/static/files/GRCm38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 7955 => array(
			'version' => 'Zv9',
			'coord_key' => 'Danio rerio',
			'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
			'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
			'twoBitURI' => '/static/files/Zv9.2bit',
			'bwgURI' => '/static/files/Zv9.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		)
	),
	'transcript_count' => (int) 11,
	'longest_tissue_len' => (int) 8,
	'transcript_data' => array(
		'ENST00000503140' => array(
			'start' => '174097755',
			'end' => '174120517',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-148L24.1-002'
		),
		'ENST00000515444' => array(
			'start' => '174094660',
			'end' => '174220398',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-148L24.1-001'
		),
		'ENST00000502956' => array(
			'start' => '173896394',
			'end' => '173911895',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.2-001'
		),
		'ENST00000515825' => array(
			'start' => '173877471',
			'end' => '173913252',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.2-002'
		),
		'ENST00000509968' => array(
			'start' => '173897252',
			'end' => '173929431',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.1-002'
		),
		'ENST00000512263' => array(
			'start' => '173897273',
			'end' => '173929525',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.1-001'
		),
		'ENST00000511346' => array(
			'start' => '174135055',
			'end' => '174154637',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-248N22.1-001'
		),
		'ENST00000504167' => array(
			'start' => '174164441',
			'end' => '174168913',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-248N22.2-001'
		),
		'ENST00000503325' => array(
			'start' => '173982619',
			'end' => '173990861',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.3-002'
		),
		'ENST00000511291' => array(
			'start' => '173924207',
			'end' => '173990851',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.3-001'
		),
		'ENSMUST00000190897' => array(
			'start' => '56674370',
			'end' => '56675706',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP23-79K4.1-001'
		)
	),
	'accession_map' => array(
		'ENST000' => '9606',
		'ENSMUST' => '10090',
		'ENSDART' => '7955',
		'ENSG000' => '9606',
		'ENSMUSG' => '10090',
		'ENSDARG' => '7955'
	),
	'sci_name_map' => array(
		(int) 9606 => 'Homo_sapiens',
		(int) 10090 => 'Mus_musculus',
		(int) 7955 => 'Danio_rerio'
	),
	'UCSC_links' => array(
		(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
		(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
		(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
	),
	'expressed_region_arr' => array(
		'CIL_0007KK_0001' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	)
)
$region_arr = array(
	'CIL_0007KK_0001' => array(
		'genes_in_region' => array(
			'ENSG00000248174' => array(
				[maximum depth reached]
			),
			'ENSG00000250043' => array(
				[maximum depth reached]
			),
			'ENSG00000250708' => array(
				[maximum depth reached]
			),
			'ENSG00000250957' => array(
				[maximum depth reached]
			),
			'ENSG00000251213' => array(
				[maximum depth reached]
			),
			'ENSG00000251216' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Brain',
			(int) 1 => 'Colon',
			(int) 2 => 'Heart',
			(int) 3 => 'Kidney',
			(int) 4 => 'Ovary',
			(int) 5 => 'Placenta',
			(int) 6 => 'Testis',
			(int) 7 => 'Adipose',
			(int) 8 => 'Adrenal',
			(int) 9 => 'Brain',
			(int) 10 => 'Breast',
			(int) 11 => 'Colon',
			(int) 12 => 'Kidney',
			(int) 13 => 'Liver',
			(int) 14 => 'Lung',
			(int) 15 => 'Ovary',
			(int) 16 => 'Placenta',
			(int) 17 => 'Testis',
			(int) 18 => 'Heart',
			(int) 19 => 'Placenta',
			(int) 20 => 'Testis',
			(int) 21 => 'Testis',
			(int) 22 => 'Brain',
			(int) 23 => 'Colon',
			(int) 24 => 'Ovary',
			(int) 25 => 'Testis',
			(int) 26 => 'Colon',
			(int) 27 => 'Heart',
			(int) 28 => 'Lung',
			(int) 29 => 'Ovary',
			(int) 30 => 'Testis',
			(int) 31 => 'Colon',
			(int) 32 => 'Heart',
			(int) 33 => 'Liver',
			(int) 34 => 'Ovary',
			(int) 35 => 'Placenta',
			(int) 36 => 'Testis',
			(int) 37 => 'Placenta',
			(int) 38 => 'Brain',
			(int) 39 => 'Brain',
			(int) 40 => 'Colon',
			(int) 41 => 'Heart',
			(int) 42 => 'Liver',
			(int) 43 => 'Lung',
			(int) 44 => 'Ovary',
			(int) 45 => 'Placenta',
			(int) 46 => 'Testis'
		)
	)
)
$gene_desc_arr = array(
	'ENSG00000248174' => null,
	'ENSG00000250043' => null,
	'ENSG00000250708' => null,
	'ENSG00000250957' => null,
	'ENSG00000251213' => null,
	'ENSG00000251216' => null,
	'ENSMUSG00000101485' => 'predicted gene 29173'
)
$gene_name_arr = array(
	'ENSG00000248174' => 'RP11-148L24.1',
	'ENSG00000250043' => 'RP11-161D15.2',
	'ENSG00000250708' => 'RP11-161D15.1',
	'ENSG00000250957' => 'RP11-248N22.1',
	'ENSG00000251213' => 'RP11-248N22.2',
	'ENSG00000251216' => 'RP11-161D15.3',
	'ENSMUSG00000101485' => 'RP23-79K4.1'
)
$accession_table = array(
	(int) 0 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007KK_0001',
			'tax_id' => '9606',
			'chromosome' => '4',
			'seq_start' => '173652005',
			'seq_end' => '174199072',
			'region_length' => '547067',
			'region_type' => 'UCNEbase',
			'el_id' => 'FBXO8'
		)
	),
	(int) 1 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007KK_0002',
			'tax_id' => '10090',
			'chromosome' => '8',
			'seq_start' => '56639407',
			'seq_end' => '57214647',
			'region_length' => '575240',
			'region_type' => 'UCNEbase',
			'el_id' => 'FBXO8'
		)
	),
	(int) 2 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007KK_0003',
			'tax_id' => '7955',
			'chromosome' => '1',
			'seq_start' => '38719454',
			'seq_end' => '38748302',
			'region_length' => '28848',
			'region_type' => 'UCNEbase',
			'el_id' => 'FBXO8'
		)
	)
)
$all_tissues = array(
	(int) 0 => 'Adipose',
	(int) 1 => 'Adrenal',
	(int) 2 => 'Brain',
	(int) 7 => 'Breast',
	(int) 8 => 'Colon',
	(int) 14 => 'Heart',
	(int) 19 => 'Kidney',
	(int) 21 => 'Liver',
	(int) 24 => 'Lung',
	(int) 27 => 'Ovary',
	(int) 33 => 'Placenta',
	(int) 39 => 'Testis'
)
$column_titles = array(
	(int) 0 => 'Region Sub-Accession',
	(int) 1 => 'Tax ID',
	(int) 2 => 'Position',
	(int) 3 => 'Region Length'
)
$geneviewer = array(
	(int) 9606 => array(
		'version' => 'GRCh38',
		'coord_key' => 'Homo sapiens',
		'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCh38.2bit',
		'bwgURI' => '/static/files/GRCh38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 10090 => array(
		'version' => 'GRCm38',
		'coord_key' => 'Mus musculus',
		'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCm38.2bit',
		'bwgURI' => '/static/files/GRCm38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 7955 => array(
		'version' => 'Zv9',
		'coord_key' => 'Danio rerio',
		'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
		'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
		'twoBitURI' => '/static/files/Zv9.2bit',
		'bwgURI' => '/static/files/Zv9.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	)
)
$transcript_count = (int) 11
$longest_tissue_len = (int) 8
$transcript_data = array(
	'ENST00000503140' => array(
		'start' => '174097755',
		'end' => '174120517',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-148L24.1-002'
	),
	'ENST00000515444' => array(
		'start' => '174094660',
		'end' => '174220398',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-148L24.1-001'
	),
	'ENST00000502956' => array(
		'start' => '173896394',
		'end' => '173911895',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.2-001'
	),
	'ENST00000515825' => array(
		'start' => '173877471',
		'end' => '173913252',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.2-002'
	),
	'ENST00000509968' => array(
		'start' => '173897252',
		'end' => '173929431',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.1-002'
	),
	'ENST00000512263' => array(
		'start' => '173897273',
		'end' => '173929525',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.1-001'
	),
	'ENST00000511346' => array(
		'start' => '174135055',
		'end' => '174154637',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-248N22.1-001'
	),
	'ENST00000504167' => array(
		'start' => '174164441',
		'end' => '174168913',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-248N22.2-001'
	),
	'ENST00000503325' => array(
		'start' => '173982619',
		'end' => '173990861',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.3-002'
	),
	'ENST00000511291' => array(
		'start' => '173924207',
		'end' => '173990851',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.3-001'
	),
	'ENSMUST00000190897' => array(
		'start' => '56674370',
		'end' => '56675706',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP23-79K4.1-001'
	)
)
$accession_map = array(
	'ENST000' => '9606',
	'ENSMUST' => '10090',
	'ENSDART' => '7955',
	'ENSG000' => '9606',
	'ENSMUSG' => '10090',
	'ENSDARG' => '7955'
)
$sci_name_map = array(
	(int) 9606 => 'Homo_sapiens',
	(int) 10090 => 'Mus_musculus',
	(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
	(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
	(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
	(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
	'CIL_0007KK_0001' => array(
		'genes_in_region' => array(
			'ENSG00000248174' => array(
				[maximum depth reached]
			),
			'ENSG00000250043' => array(
				[maximum depth reached]
			),
			'ENSG00000250708' => array(
				[maximum depth reached]
			),
			'ENSG00000250957' => array(
				[maximum depth reached]
			),
			'ENSG00000251213' => array(
				[maximum depth reached]
			),
			'ENSG00000251216' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Brain',
			(int) 1 => 'Colon',
			(int) 2 => 'Heart',
			(int) 3 => 'Kidney',
			(int) 4 => 'Ovary',
			(int) 5 => 'Placenta',
			(int) 6 => 'Testis',
			(int) 7 => 'Adipose',
			(int) 8 => 'Adrenal',
			(int) 9 => 'Brain',
			(int) 10 => 'Breast',
			(int) 11 => 'Colon',
			(int) 12 => 'Kidney',
			(int) 13 => 'Liver',
			(int) 14 => 'Lung',
			(int) 15 => 'Ovary',
			(int) 16 => 'Placenta',
			(int) 17 => 'Testis',
			(int) 18 => 'Heart',
			(int) 19 => 'Placenta',
			(int) 20 => 'Testis',
			(int) 21 => 'Testis',
			(int) 22 => 'Brain',
			(int) 23 => 'Colon',
			(int) 24 => 'Ovary',
			(int) 25 => 'Testis',
			(int) 26 => 'Colon',
			(int) 27 => 'Heart',
			(int) 28 => 'Lung',
			(int) 29 => 'Ovary',
			(int) 30 => 'Testis',
			(int) 31 => 'Colon',
			(int) 32 => 'Heart',
			(int) 33 => 'Liver',
			(int) 34 => 'Ovary',
			(int) 35 => 'Placenta',
			(int) 36 => 'Testis',
			(int) 37 => 'Placenta',
			(int) 38 => 'Brain',
			(int) 39 => 'Brain',
			(int) 40 => 'Colon',
			(int) 41 => 'Heart',
			(int) 42 => 'Liver',
			(int) 43 => 'Lung',
			(int) 44 => 'Ovary',
			(int) 45 => 'Placenta',
			(int) 46 => 'Testis'
		)
	)
)
$accession = array(
	'region_elements' => array(
		'region_element_id' => 'CIL_0007KK_0003',
		'tax_id' => '7955',
		'chromosome' => '1',
		'seq_start' => '38719454',
		'seq_end' => '38748302',
		'region_length' => '28848',
		'region_type' => 'UCNEbase',
		'el_id' => 'FBXO8'
	)
)
$gene_el = array(
	'ENST00000503325' => array(
		'Brain' => array(
			'average_FPKM' => '0.050',
			'stddev_FPKM' => '0.00'
		)
	),
	'ENST00000511291' => array(
		'Brain' => array(
			'average_FPKM' => '0.006',
			'stddev_FPKM' => '0.00'
		),
		'Colon' => array(
			'average_FPKM' => '0.056',
			'stddev_FPKM' => '0.00'
		),
		'Heart' => array(
			'average_FPKM' => '0.146',
			'stddev_FPKM' => '0.08'
		),
		'Liver' => array(
			'average_FPKM' => '0.005',
			'stddev_FPKM' => '0.00'
		),
		'Lung' => array(
			'average_FPKM' => '0.013',
			'stddev_FPKM' => '0.01'
		),
		'Ovary' => array(
			'average_FPKM' => '0.032',
			'stddev_FPKM' => '0.00'
		),
		'Placenta' => array(
			'average_FPKM' => '0.119',
			'stddev_FPKM' => '0.06'
		),
		'Testis' => array(
			'average_FPKM' => '0.284',
			'stddev_FPKM' => '0.23'
		)
	)
)
$gene_key = 'ENSG00000251216'
$is_first = false
$tran_el = array(
	'Brain' => array(
		'average_FPKM' => '0.006',
		'stddev_FPKM' => '0.00'
	),
	'Colon' => array(
		'average_FPKM' => '0.056',
		'stddev_FPKM' => '0.00'
	),
	'Heart' => array(
		'average_FPKM' => '0.146',
		'stddev_FPKM' => '0.08'
	),
	'Liver' => array(
		'average_FPKM' => '0.005',
		'stddev_FPKM' => '0.00'
	),
	'Lung' => array(
		'average_FPKM' => '0.013',
		'stddev_FPKM' => '0.01'
	),
	'Ovary' => array(
		'average_FPKM' => '0.032',
		'stddev_FPKM' => '0.00'
	),
	'Placenta' => array(
		'average_FPKM' => '0.119',
		'stddev_FPKM' => '0.06'
	),
	'Testis' => array(
		'average_FPKM' => '0.284',
		'stddev_FPKM' => '0.23'
	)
)
$tran_key = 'ENST00000511291'
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]Code Context
        <tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
        <?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
	'region_arr' => array(
		'CIL_0007KK_0001' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	),
	'gene_desc_arr' => array(
		'ENSG00000248174' => null,
		'ENSG00000250043' => null,
		'ENSG00000250708' => null,
		'ENSG00000250957' => null,
		'ENSG00000251213' => null,
		'ENSG00000251216' => null,
		'ENSMUSG00000101485' => 'predicted gene 29173'
	),
	'gene_name_arr' => array(
		'ENSG00000248174' => 'RP11-148L24.1',
		'ENSG00000250043' => 'RP11-161D15.2',
		'ENSG00000250708' => 'RP11-161D15.1',
		'ENSG00000250957' => 'RP11-248N22.1',
		'ENSG00000251213' => 'RP11-248N22.2',
		'ENSG00000251216' => 'RP11-161D15.3',
		'ENSMUSG00000101485' => 'RP23-79K4.1'
	),
	'accession_table' => array(
		(int) 0 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 1 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 2 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		)
	),
	'all_tissues' => array(
		(int) 0 => 'Adipose',
		(int) 1 => 'Adrenal',
		(int) 2 => 'Brain',
		(int) 7 => 'Breast',
		(int) 8 => 'Colon',
		(int) 14 => 'Heart',
		(int) 19 => 'Kidney',
		(int) 21 => 'Liver',
		(int) 24 => 'Lung',
		(int) 27 => 'Ovary',
		(int) 33 => 'Placenta',
		(int) 39 => 'Testis'
	),
	'column_titles' => array(
		(int) 0 => 'Region Sub-Accession',
		(int) 1 => 'Tax ID',
		(int) 2 => 'Position',
		(int) 3 => 'Region Length'
	),
	'geneviewer' => array(
		(int) 9606 => array(
			'version' => 'GRCh38',
			'coord_key' => 'Homo sapiens',
			'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCh38.2bit',
			'bwgURI' => '/static/files/GRCh38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 10090 => array(
			'version' => 'GRCm38',
			'coord_key' => 'Mus musculus',
			'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCm38.2bit',
			'bwgURI' => '/static/files/GRCm38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 7955 => array(
			'version' => 'Zv9',
			'coord_key' => 'Danio rerio',
			'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
			'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
			'twoBitURI' => '/static/files/Zv9.2bit',
			'bwgURI' => '/static/files/Zv9.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		)
	),
	'transcript_count' => (int) 11,
	'longest_tissue_len' => (int) 8,
	'transcript_data' => array(
		'ENST00000503140' => array(
			'start' => '174097755',
			'end' => '174120517',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-148L24.1-002'
		),
		'ENST00000515444' => array(
			'start' => '174094660',
			'end' => '174220398',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-148L24.1-001'
		),
		'ENST00000502956' => array(
			'start' => '173896394',
			'end' => '173911895',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.2-001'
		),
		'ENST00000515825' => array(
			'start' => '173877471',
			'end' => '173913252',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.2-002'
		),
		'ENST00000509968' => array(
			'start' => '173897252',
			'end' => '173929431',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.1-002'
		),
		'ENST00000512263' => array(
			'start' => '173897273',
			'end' => '173929525',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.1-001'
		),
		'ENST00000511346' => array(
			'start' => '174135055',
			'end' => '174154637',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-248N22.1-001'
		),
		'ENST00000504167' => array(
			'start' => '174164441',
			'end' => '174168913',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-248N22.2-001'
		),
		'ENST00000503325' => array(
			'start' => '173982619',
			'end' => '173990861',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.3-002'
		),
		'ENST00000511291' => array(
			'start' => '173924207',
			'end' => '173990851',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP11-161D15.3-001'
		),
		'ENSMUST00000190897' => array(
			'start' => '56674370',
			'end' => '56675706',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'RP23-79K4.1-001'
		)
	),
	'accession_map' => array(
		'ENST000' => '9606',
		'ENSMUST' => '10090',
		'ENSDART' => '7955',
		'ENSG000' => '9606',
		'ENSMUSG' => '10090',
		'ENSDARG' => '7955'
	),
	'sci_name_map' => array(
		(int) 9606 => 'Homo_sapiens',
		(int) 10090 => 'Mus_musculus',
		(int) 7955 => 'Danio_rerio'
	),
	'UCSC_links' => array(
		(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
		(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
		(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
	),
	'expressed_region_arr' => array(
		'CIL_0007KK_0001' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	)
)
$region_arr = array(
	'CIL_0007KK_0001' => array(
		'genes_in_region' => array(
			'ENSG00000248174' => array(
				[maximum depth reached]
			),
			'ENSG00000250043' => array(
				[maximum depth reached]
			),
			'ENSG00000250708' => array(
				[maximum depth reached]
			),
			'ENSG00000250957' => array(
				[maximum depth reached]
			),
			'ENSG00000251213' => array(
				[maximum depth reached]
			),
			'ENSG00000251216' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Brain',
			(int) 1 => 'Colon',
			(int) 2 => 'Heart',
			(int) 3 => 'Kidney',
			(int) 4 => 'Ovary',
			(int) 5 => 'Placenta',
			(int) 6 => 'Testis',
			(int) 7 => 'Adipose',
			(int) 8 => 'Adrenal',
			(int) 9 => 'Brain',
			(int) 10 => 'Breast',
			(int) 11 => 'Colon',
			(int) 12 => 'Kidney',
			(int) 13 => 'Liver',
			(int) 14 => 'Lung',
			(int) 15 => 'Ovary',
			(int) 16 => 'Placenta',
			(int) 17 => 'Testis',
			(int) 18 => 'Heart',
			(int) 19 => 'Placenta',
			(int) 20 => 'Testis',
			(int) 21 => 'Testis',
			(int) 22 => 'Brain',
			(int) 23 => 'Colon',
			(int) 24 => 'Ovary',
			(int) 25 => 'Testis',
			(int) 26 => 'Colon',
			(int) 27 => 'Heart',
			(int) 28 => 'Lung',
			(int) 29 => 'Ovary',
			(int) 30 => 'Testis',
			(int) 31 => 'Colon',
			(int) 32 => 'Heart',
			(int) 33 => 'Liver',
			(int) 34 => 'Ovary',
			(int) 35 => 'Placenta',
			(int) 36 => 'Testis',
			(int) 37 => 'Placenta',
			(int) 38 => 'Brain',
			(int) 39 => 'Brain',
			(int) 40 => 'Colon',
			(int) 41 => 'Heart',
			(int) 42 => 'Liver',
			(int) 43 => 'Lung',
			(int) 44 => 'Ovary',
			(int) 45 => 'Placenta',
			(int) 46 => 'Testis'
		)
	)
)
$gene_desc_arr = array(
	'ENSG00000248174' => null,
	'ENSG00000250043' => null,
	'ENSG00000250708' => null,
	'ENSG00000250957' => null,
	'ENSG00000251213' => null,
	'ENSG00000251216' => null,
	'ENSMUSG00000101485' => 'predicted gene 29173'
)
$gene_name_arr = array(
	'ENSG00000248174' => 'RP11-148L24.1',
	'ENSG00000250043' => 'RP11-161D15.2',
	'ENSG00000250708' => 'RP11-161D15.1',
	'ENSG00000250957' => 'RP11-248N22.1',
	'ENSG00000251213' => 'RP11-248N22.2',
	'ENSG00000251216' => 'RP11-161D15.3',
	'ENSMUSG00000101485' => 'RP23-79K4.1'
)
$accession_table = array(
	(int) 0 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007KK_0001',
			'tax_id' => '9606',
			'chromosome' => '4',
			'seq_start' => '173652005',
			'seq_end' => '174199072',
			'region_length' => '547067',
			'region_type' => 'UCNEbase',
			'el_id' => 'FBXO8'
		)
	),
	(int) 1 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007KK_0002',
			'tax_id' => '10090',
			'chromosome' => '8',
			'seq_start' => '56639407',
			'seq_end' => '57214647',
			'region_length' => '575240',
			'region_type' => 'UCNEbase',
			'el_id' => 'FBXO8'
		)
	),
	(int) 2 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007KK_0003',
			'tax_id' => '7955',
			'chromosome' => '1',
			'seq_start' => '38719454',
			'seq_end' => '38748302',
			'region_length' => '28848',
			'region_type' => 'UCNEbase',
			'el_id' => 'FBXO8'
		)
	)
)
$all_tissues = array(
	(int) 0 => 'Adipose',
	(int) 1 => 'Adrenal',
	(int) 2 => 'Brain',
	(int) 7 => 'Breast',
	(int) 8 => 'Colon',
	(int) 14 => 'Heart',
	(int) 19 => 'Kidney',
	(int) 21 => 'Liver',
	(int) 24 => 'Lung',
	(int) 27 => 'Ovary',
	(int) 33 => 'Placenta',
	(int) 39 => 'Testis'
)
$column_titles = array(
	(int) 0 => 'Region Sub-Accession',
	(int) 1 => 'Tax ID',
	(int) 2 => 'Position',
	(int) 3 => 'Region Length'
)
$geneviewer = array(
	(int) 9606 => array(
		'version' => 'GRCh38',
		'coord_key' => 'Homo sapiens',
		'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCh38.2bit',
		'bwgURI' => '/static/files/GRCh38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 10090 => array(
		'version' => 'GRCm38',
		'coord_key' => 'Mus musculus',
		'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCm38.2bit',
		'bwgURI' => '/static/files/GRCm38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 7955 => array(
		'version' => 'Zv9',
		'coord_key' => 'Danio rerio',
		'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
		'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
		'twoBitURI' => '/static/files/Zv9.2bit',
		'bwgURI' => '/static/files/Zv9.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	)
)
$transcript_count = (int) 11
$longest_tissue_len = (int) 8
$transcript_data = array(
	'ENST00000503140' => array(
		'start' => '174097755',
		'end' => '174120517',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-148L24.1-002'
	),
	'ENST00000515444' => array(
		'start' => '174094660',
		'end' => '174220398',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-148L24.1-001'
	),
	'ENST00000502956' => array(
		'start' => '173896394',
		'end' => '173911895',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.2-001'
	),
	'ENST00000515825' => array(
		'start' => '173877471',
		'end' => '173913252',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.2-002'
	),
	'ENST00000509968' => array(
		'start' => '173897252',
		'end' => '173929431',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.1-002'
	),
	'ENST00000512263' => array(
		'start' => '173897273',
		'end' => '173929525',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.1-001'
	),
	'ENST00000511346' => array(
		'start' => '174135055',
		'end' => '174154637',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-248N22.1-001'
	),
	'ENST00000504167' => array(
		'start' => '174164441',
		'end' => '174168913',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-248N22.2-001'
	),
	'ENST00000503325' => array(
		'start' => '173982619',
		'end' => '173990861',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.3-002'
	),
	'ENST00000511291' => array(
		'start' => '173924207',
		'end' => '173990851',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP11-161D15.3-001'
	),
	'ENSMUST00000190897' => array(
		'start' => '56674370',
		'end' => '56675706',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'RP23-79K4.1-001'
	)
)
$accession_map = array(
	'ENST000' => '9606',
	'ENSMUST' => '10090',
	'ENSDART' => '7955',
	'ENSG000' => '9606',
	'ENSMUSG' => '10090',
	'ENSDARG' => '7955'
)
$sci_name_map = array(
	(int) 9606 => 'Homo_sapiens',
	(int) 10090 => 'Mus_musculus',
	(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
	(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
	(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
	(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
	'CIL_0007KK_0001' => array(
		'genes_in_region' => array(
			'ENSG00000248174' => array(
				[maximum depth reached]
			),
			'ENSG00000250043' => array(
				[maximum depth reached]
			),
			'ENSG00000250708' => array(
				[maximum depth reached]
			),
			'ENSG00000250957' => array(
				[maximum depth reached]
			),
			'ENSG00000251213' => array(
				[maximum depth reached]
			),
			'ENSG00000251216' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Brain',
			(int) 1 => 'Colon',
			(int) 2 => 'Heart',
			(int) 3 => 'Kidney',
			(int) 4 => 'Ovary',
			(int) 5 => 'Placenta',
			(int) 6 => 'Testis',
			(int) 7 => 'Adipose',
			(int) 8 => 'Adrenal',
			(int) 9 => 'Brain',
			(int) 10 => 'Breast',
			(int) 11 => 'Colon',
			(int) 12 => 'Kidney',
			(int) 13 => 'Liver',
			(int) 14 => 'Lung',
			(int) 15 => 'Ovary',
			(int) 16 => 'Placenta',
			(int) 17 => 'Testis',
			(int) 18 => 'Heart',
			(int) 19 => 'Placenta',
			(int) 20 => 'Testis',
			(int) 21 => 'Testis',
			(int) 22 => 'Brain',
			(int) 23 => 'Colon',
			(int) 24 => 'Ovary',
			(int) 25 => 'Testis',
			(int) 26 => 'Colon',
			(int) 27 => 'Heart',
			(int) 28 => 'Lung',
			(int) 29 => 'Ovary',
			(int) 30 => 'Testis',
			(int) 31 => 'Colon',
			(int) 32 => 'Heart',
			(int) 33 => 'Liver',
			(int) 34 => 'Ovary',
			(int) 35 => 'Placenta',
			(int) 36 => 'Testis',
			(int) 37 => 'Placenta',
			(int) 38 => 'Brain',
			(int) 39 => 'Brain',
			(int) 40 => 'Colon',
			(int) 41 => 'Heart',
			(int) 42 => 'Liver',
			(int) 43 => 'Lung',
			(int) 44 => 'Ovary',
			(int) 45 => 'Placenta',
			(int) 46 => 'Testis'
		)
	)
)
$accession = array(
	'region_elements' => array(
		'region_element_id' => 'CIL_0007KK_0003',
		'tax_id' => '7955',
		'chromosome' => '1',
		'seq_start' => '38719454',
		'seq_end' => '38748302',
		'region_length' => '28848',
		'region_type' => 'UCNEbase',
		'el_id' => 'FBXO8'
	)
)
$gene_el = array(
	'ENST00000503325' => array(
		'Brain' => array(
			'average_FPKM' => '0.050',
			'stddev_FPKM' => '0.00'
		)
	),
	'ENST00000511291' => array(
		'Brain' => array(
			'average_FPKM' => '0.006',
			'stddev_FPKM' => '0.00'
		),
		'Colon' => array(
			'average_FPKM' => '0.056',
			'stddev_FPKM' => '0.00'
		),
		'Heart' => array(
			'average_FPKM' => '0.146',
			'stddev_FPKM' => '0.08'
		),
		'Liver' => array(
			'average_FPKM' => '0.005',
			'stddev_FPKM' => '0.00'
		),
		'Lung' => array(
			'average_FPKM' => '0.013',
			'stddev_FPKM' => '0.01'
		),
		'Ovary' => array(
			'average_FPKM' => '0.032',
			'stddev_FPKM' => '0.00'
		),
		'Placenta' => array(
			'average_FPKM' => '0.119',
			'stddev_FPKM' => '0.06'
		),
		'Testis' => array(
			'average_FPKM' => '0.284',
			'stddev_FPKM' => '0.23'
		)
	)
)
$gene_key = 'ENSG00000251216'
$is_first = false
$tran_el = array(
	'Brain' => array(
		'average_FPKM' => '0.006',
		'stddev_FPKM' => '0.00'
	),
	'Colon' => array(
		'average_FPKM' => '0.056',
		'stddev_FPKM' => '0.00'
	),
	'Heart' => array(
		'average_FPKM' => '0.146',
		'stddev_FPKM' => '0.08'
	),
	'Liver' => array(
		'average_FPKM' => '0.005',
		'stddev_FPKM' => '0.00'
	),
	'Lung' => array(
		'average_FPKM' => '0.013',
		'stddev_FPKM' => '0.01'
	),
	'Ovary' => array(
		'average_FPKM' => '0.032',
		'stddev_FPKM' => '0.00'
	),
	'Placenta' => array(
		'average_FPKM' => '0.119',
		'stddev_FPKM' => '0.06'
	),
	'Testis' => array(
		'average_FPKM' => '0.284',
		'stddev_FPKM' => '0.23'
	)
)
$tran_key = 'ENST00000511291'
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Source ID		Type	Tax ID	Position
FBXO8		UCNEbase	7955	1:38719454-38748302
Gene		Transcript	Position	Biotype

Expression Patterns

Heat Map

Heat Map (Expressed Only)

Numeric Values

Gene

Transcript

Adipose

Adrenal

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Ovary

Placenta

Testis

ENSG00000248174

ENST00000503140

N/A

0.059±0.00

N/A

0.767±0.55

0.138±0.00

0.057±0.00

N/A

0.223±0.18

0.111±0.04

0.166±0.07

ENST00000515444

0.049±0.00

0.069±0.00

0.106±0.01

0.068±0.00

0.035±0.00

N/A

0.058±0.00

0.547±0.47

0.008±0.00

0.098±0.08

0.076±0.04

0.047±0.00

ENSG00000250043

ENST00000502956

N/A

0.015±0.00

N/A

0.028±0.00

0.129±0.10

ENST00000515825

N/A

0.126±0.01

ENSG00000250708

ENST00000509968

N/A

0.093±0.00

N/A

0.084±0.00

N/A

0.203±0.00

N/A

1.462±1.34

ENST00000512263

N/A

0.153±0.00

0.792±0.00

N/A

0.470±0.00

0.585±0.17

N/A

0.929±0.00

ENSG00000250957

ENST00000511346

N/A

0.282±0.00

0.053±0.00

N/A

0.055±0.00

N/A

0.191±0.00

0.054±0.02

0.072±0.00

ENSG00000251213

ENST00000504167

N/A

0.107±0.00

N/A

ENSG00000251216

ENST00000503325

N/A

0.050±0.00

N/A

ENST00000511291

N/A

0.006±0.00

N/A

0.056±0.00

0.146±0.08

N/A

0.005±0.00

0.013±0.01

0.032±0.00

0.119±0.06

0.284±0.23

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

Expression Patterns

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