C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007M1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ESRRB UCNEbase 9606 14:76034985-76675411
GeneTranscriptPositionBiotype
ENSG00000089916 (GPATCH2L)
G patch domain containing 2-like 		ENST00000261530 (GPATCH2L-003) 76151936-76214343 protein_coding
ENST00000312858 (GPATCH2L-014) 76151935-76202788 protein_coding
ENST00000553588 (GPATCH2L-010) 76180782-76196585 protein_coding
ENST00000554125 (GPATCH2L-001) 76151934-76180022 retained_intron
ENST00000554375 (GPATCH2L-004) 76151916-76202007 nonsense_mediated_decay
ENST00000554799 (GPATCH2L-006) 76170596-76195987 protein_coding
ENST00000556109 (GPATCH2L-008) 76151919-76154978 protein_coding
ENST00000556372 (GPATCH2L-013) 76195908-76254342 nonsense_mediated_decay
ENST00000556663 (GPATCH2L-002) 76153646-76174035 protein_coding
ENST00000556675 (GPATCH2L-012) 76180815-76234926 processed_transcript
ENST00000557207 (GPATCH2L-009) 76151930-76153002 protein_coding
ENST00000557263 (GPATCH2L-005) 76151922-76174035 protein_coding
ENST00000557542 (GPATCH2L-007) 76151919-76154681 protein_coding
ENST00000621494 (GPATCH2L-201) 76154354-76212803 protein_coding
ENSG00000119715 (ESRRB)
estrogen-related receptor beta 		ENST00000380887 (ESRRB-003) 76404429-76501841 protein_coding
ENST00000505752 (ESRRB-001) 76371144-76500865 nonsense_mediated_decay
ENST00000507951 (ESRRB-005) 76376357-76482129 processed_transcript
ENST00000509242 (ESRRB-201) 76407402-76501835 protein_coding
ENST00000509323 (ESRRB-004) 76439642-76463427 processed_transcript
ENST00000512784 (ESRRB-002) 76310614-76500704 protein_coding
ENST00000556177 (ESRRB-006) 76407538-76498511 protein_coding
ENST00000611036 (ESRRB-007) 76499646-76501835 retained_intron
ENSG00000242952 (RP11-187O7.1)
 ENST00000464073 (RP11-187O7.1-001) 76634775-76635661 transcribed_processed_pseudogene
ENSG00000258402 (RP11-516J2.1)
 ENST00000555465 (RP11-516J2.1-001) 76280943-76310066 lincRNA
ENSG00000259124 (RP11-187O7.3)
 ENST00000554926 (RP11-187O7.3-001) 76495363-76726712 lincRNA
ENSG00000271423 (CYCSP1)
cytochrome c, somatic pseudogene 1 		ENST00000604815 (CYCSP1-001) 76633714-76634028 processed_pseudogene
ENSG00000280078 (RP11-361H10.5)
 ENST00000624275 (RP11-361H10.5-001) 76279173-76283103 TEC
CIL_0007M1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ESRRB UCNEbase 10090 12:86115809-86636147
GeneTranscriptPositionBiotype
ENSMUSG00000007867 (Ift43)
intraflagellar transport 43 		ENSMUST00000054565 (Ift43-201) 86082561-86162458 protein_coding
ENSMUSG00000021254 (Gpatch2l)
G patch domain containing 2 like 		ENSMUST00000071106 (Gpatch2l-201) 86241890-86291414 protein_coding
ENSMUSG00000021255 (Esrrb)
estrogen related receptor, beta 		ENSMUST00000021680 (Esrrb-006) 86421883-86519800 protein_coding
ENSMUST00000110203 (Esrrb-003) 86421644-86515522 protein_coding
ENSMUST00000110204 (Esrrb-002) 86421644-86521625 protein_coding
ENSMUST00000116402 (Esrrb-001) 86361117-86521628 protein_coding
ENSMUST00000136464 (Esrrb-004) 86504409-86509967 processed_transcript
ENSMUST00000167891 (Esrrb-005) 86470117-86519065 protein_coding
ENSMUSG00000097488 (4732487G21Rik)
RIKEN cDNA 4732487G21 gene 		ENSMUST00000181495 (4732487G21Rik-201) 86290761-86306006 lincRNA
ENSMUSG00000097543 (Gm805)
predicted gene 805 		ENSMUST00000181667 (Gm805-201) 86169341-86195102 lincRNA
CIL_0007M1_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ESRRB UCNEbase 7955 17:52633941-53008451
GeneTranscriptPositionBiotype
ENSDARG00000040151 (esrrb)
estrogen-related receptor beta 		ENSDART00000007600 (esrrb-201) 52843627-52916658 protein_coding
ENSDARG00000087273 (IFT43)
intraflagellar transport 43 		ENSDART00000124303 (IFT43-201) 52648633-52649749 protein_coding
ENSDARG00000091391 (IFT43)
Intraflagellar transport protein 43 homolog 		ENSDART00000123726 (IFT43-201) 52624474-52640871 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007M1_0001ENSG00000089916ENST00000261530ENST00000312858ENST00000553588ENST00000554125ENST00000554375ENST00000554799ENST00000556109ENST00000556372ENST00000556663ENST00000556675ENST00000557207ENST00000557263ENST00000557542ENST00000621494ENSG00000119715ENST00000380887ENST00000505752ENST00000507951ENST00000509242ENST00000509323ENST00000512784ENST00000556177ENST00000611036ENSG00000242952ENST00000464073ENSG00000258402ENST00000555465ENSG00000259124ENST00000554926ENSG00000271423ENST00000604815ENSG00000280078ENST00000624275CIL_0007M1_0002ENSMUSG00000007867ENSMUST00000054565ENSMUSG00000021254ENSMUST00000071106ENSMUSG00000021255ENSMUST00000021680ENSMUST00000110203ENSMUST00000110204ENSMUST00000116402ENSMUST00000136464ENSMUST00000167891ENSMUSG00000097488ENSMUST00000181495ENSMUSG00000097543ENSMUST00000181667CIL_0007M1_0003ENSDARG00000040151ENSDART00000007600ENSDARG00000087273ENSDART00000124303ENSDARG00000091391ENSDART00000123726
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007M1_0001ENSG00000089916ENST00000261530ENST00000312858ENST00000554125ENST00000554375ENST00000557263ENST00000621494ENSG00000119715ENST00000380887ENST00000505752ENST00000507951ENST00000512784ENST00000556177ENST00000611036ENSG00000242952ENST00000464073ENSG00000258402ENST00000555465ENSG00000259124ENST00000554926ENSG00000271423ENST00000604815ENSG00000280078ENST00000624275CIL_0007M1_0002ENSMUSG00000007867ENSMUST00000054565ENSMUSG00000021254ENSMUST00000071106ENSMUSG00000021255ENSMUST00000021680ENSMUST00000110203ENSMUST00000110204ENSMUST00000116402ENSMUST00000136464ENSMUST00000167891ENSMUSG00000097488ENSMUST00000181495ENSMUSG00000097543ENSMUST00000181667CIL_0007M1_0003ENSDARG00000040151ENSDART00000007600ENSDARG00000087273ENSDART00000124303ENSDARG00000091391ENSDART00000123726
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000089916 ENST00000261530 N/A 1.465±0.00 0.409±0.00 1.133±0.00 1.169±0.34 1.058±0.30 0.500±0.22 N/A 1.056±0.69 0.679±0.24 0.579±0.00 0.554±0.00 0.485±0.06 N/A
ENST00000312858 N/A N/A N/A N/A N/A N/A 1.037±0.00 N/A N/A 2.050±0.00 1.819±0.00 N/A 0.948±0.00 N/A
ENST00000553588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554125 N/A N/A 0.795±0.00 0.852±0.00 N/A 0.855±0.00 0.430±0.00 N/A 1.827±0.00 1.688±0.00 N/A 1.748±0.00 N/A N/A
ENST00000554375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.657±0.00 N/A 1.504±0.02 N/A
ENST00000554799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.953±0.00 2.440±0.00 18.305±0.00
ENST00000557542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621494 0.870±0.00 N/A 0.923±0.00 1.260±0.00 1.448±0.00 1.153±0.00 0.448±0.16 0.399±0.00 1.991±0.00 1.276±0.27 1.056±0.37 0.741±0.12 0.334±0.18 3.070±0.00
ENSG00000119715 ENST00000380887 N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505752 N/A N/A N/A N/A 0.115±0.00 N/A N/A 0.057±0.00 N/A N/A N/A N/A N/A 0.190±0.00
ENST00000507951 N/A N/A N/A N/A N/A 0.237±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512784 N/A 0.128±0.00 4.170±0.00 N/A N/A N/A N/A N/A 0.040±0.00 N/A N/A 0.104±0.00 0.053±0.00 0.522±0.00
ENST00000556177 0.055±0.00 N/A N/A 0.167±0.00 N/A N/A N/A N/A 0.036±0.00 N/A 1.300±0.42 0.032±0.01 N/A 0.645±0.00
ENST00000611036 0.122±0.00 0.196±0.00 1.497±0.00 0.032±0.02 0.133±0.06 N/A 1.596±0.00 4.408±0.00 N/A N/A 0.361±0.11 0.023±0.01 0.061±0.03 0.256±0.00
ENSG00000242952 ENST00000464073 0.036±0.00 0.113±0.00 N/A 0.041±0.00 0.098±0.00 0.107±0.00 0.034±0.00 0.171±0.00 0.050±0.00 0.071±0.00 0.064±0.00 0.183±0.00 0.278±0.00 0.034±0.00
ENSG00000258402 ENST00000555465 0.384±0.00 0.525±0.00 2.117±0.00 0.251±0.00 0.201±0.00 0.092±0.00 0.154±0.00 0.366±0.00 0.059±0.00 N/A 0.289±0.00 N/A N/A 0.317±0.23
ENSG00000259124 ENST00000554926 0.059±0.00 0.061±0.00 N/A 0.034±0.00 0.365±0.18 0.434±0.00 0.257±0.00 N/A 0.054±0.00 0.028±0.00 0.053±0.00 0.112±0.03 0.313±0.19 0.111±0.00
ENSG00000271423 ENST00000604815 N/A N/A N/A 0.122±0.00 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000280078 ENST00000624275 0.016±0.00 0.043±0.00 0.033±0.00 0.035±0.00 0.018±0.00 0.019±0.00 0.025±0.02 0.050±0.03 0.032±0.00 0.032±0.00 N/A 0.005±0.00 N/A 0.038±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007867 ENSMUST00000054565 7.940±1.55 5.554±1.29 14.094±0.00 6.523±0.77 6.364±2.34 6.505±1.88 10.953±2.06 5.823±3.06 2.101±0.74 14.869±4.49 1.648±1.05 12.539±4.86 31.202±32.58 60.079±9.51
ENSMUSG00000021254 ENSMUST00000071106 4.866±1.13 3.430±1.23 5.961±0.01 6.161±1.86 4.558±1.79 2.703±1.51 2.450±0.51 1.791±0.52 2.480±0.99 4.595±0.43 3.008±0.80 4.652±2.50 2.761±1.08 6.063±3.20
ENSMUSG00000021255 ENSMUST00000021680 0.029±0.00 0.049±0.01 0.004±0.00 N/A N/A 0.018±0.00 N/A N/A N/A 0.024±0.00 0.472±0.00 0.256±0.03 N/A N/A
ENSMUST00000110203 N/A 0.096±0.02 N/A N/A 0.951±0.00 N/A N/A N/A 0.116±0.00 0.022±0.00 N/A N/A N/A N/A
ENSMUST00000110204 0.036±0.02 0.033±0.01 0.007±0.00 2.087±1.53 0.524±0.12 N/A 2.157±0.31 7.323±1.34 0.139±0.08 0.063±0.01 1.066±0.41 0.249±0.09 1.220±1.18 1.571±0.00
ENSMUST00000116402 0.016±0.00 N/A N/A N/A 0.204±0.03 0.067±0.04 4.504±0.47 1.203±0.43 0.042±0.00 0.150±0.01 0.500±0.34 0.375±0.12 0.773±0.00 N/A
ENSMUST00000136464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.200±0.61 N/A N/A
ENSMUST00000167891 0.096±0.00 0.066±0.00 0.006±0.00 N/A N/A 0.190±0.06 N/A N/A 0.042±0.00 0.036±0.00 N/A 0.648±0.00 N/A 1.791±0.29
ENSMUSG00000097488 ENSMUST00000181495 1.369±0.00 N/A N/A N/A 0.930±0.08 N/A 0.737±0.00 1.122±0.04 0.683±0.11 N/A 0.565±0.00 1.789±0.00 0.925±0.31 N/A
ENSMUSG00000097543 ENSMUST00000181667 N/A 0.094±0.00 0.010±0.00 0.009±0.00 0.018±0.01 N/A N/A N/A N/A N/A N/A 0.006±0.00 0.009±0.01 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000040151 ENSDART00000007600 N/A N/A N/A 1.344±0.00 N/A N/A 0.192±0.07 N/A 0.058±0.00 N/A 1.425±0.00 N/A N/A N/A
ENSDARG00000087273 ENSDART00000124303 N/A N/A N/A 27.943±21.51 N/A N/A 10.402±7.95 20.160±0.00 N/A N/A 0.784±0.00 N/A N/A N/A
ENSDARG00000091391 ENSDART00000123726 N/A N/A N/A 15.030±8.58 N/A N/A 0.854±0.00 8.299±0.00 0.444±0.00 N/A 1.937±0.00 N/A N/A N/A

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