C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007OH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
NFIA UCNEbase 9606 1:60234802-61638594
GeneTranscriptPositionBiotype
ENSG00000162599 (NFIA)
nuclear factor I/A 		ENST00000357977 (NFIA-008) 61404076-61458037 protein_coding
ENST00000371184 (NFIA-006) 61082754-61455487 protein_coding
ENST00000371185 (NFIA-005) 61082748-61455526 protein_coding
ENST00000371187 (NFIA-003) 61082621-61456394 protein_coding
ENST00000371189 (NFIA-015) 61081862-61455562 protein_coding
ENST00000371191 (NFIA-002) 60865259-61455525 protein_coding
ENST00000403491 (NFIA-001) 61082308-61462793 protein_coding
ENST00000407417 (NFIA-014) 61077274-61455585 protein_coding
ENST00000476646 (NFIA-013) 61053830-61332586 protein_coding
ENST00000479364 (NFIA-009) 61081767-61406727 processed_transcript
ENST00000482020 (NFIA-010) 61352450-61404226 protein_coding
ENST00000485903 (NFIA-007) 61082723-61455524 protein_coding
ENST00000493627 (NFIA-011) 61406672-61455874 protein_coding
ENST00000496712 (NFIA-012) 61088412-61133028 protein_coding
ENSG00000226476 (RP11-776H12.1)
 ENST00000439156 (RP11-776H12.1-001) 60540249-60640491 lincRNA
ENSG00000231252 (RP11-436K8.1)
 ENST00000423403 (RP11-436K8.1-001) 60659631-60825584 lincRNA
ENSG00000237853 (NFIA-AS1)
NFIA antisense RNA 1 		ENST00000442027 (NFIA-AS1-001) 61248945-61253510 lincRNA
ENST00000596354 (NFIA-AS1-002) 61248994-61253510 lincRNA
ENST00000596404 (NFIA-AS1-003) 61248996-61253510 lincRNA
ENST00000617929 (NFIA-AS1-004) 61248965-61253510 lincRNA
ENSG00000237928 (NFIA-AS2)
NFIA antisense RNA 2 		ENST00000418662 (NFIA-AS2-002) 60940395-60952849 antisense
ENST00000421455 (NFIA-AS2-003) 60954054-60970745 antisense
ENST00000438559 (NFIA-AS2-001) 60940239-60970776 antisense
ENSG00000264551 (AC099791.1)
 ENST00000580743 (AC099791.1-201) 61629031-61629121 miRNA
ENSG00000270742 (RP4-802A10.1)
 ENST00000603233 (RP4-802A10.1-001) 61124733-61125202 sense_intronic
CIL_0007OH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
NFIA UCNEbase 10090 4:96979874-98319114
GeneTranscriptPositionBiotype
ENSMUSG00000028565 (Nfia)
nuclear factor I/A 		ENSMUST00000052018 (Nfia-004) 97777819-98118871 protein_coding
ENSMUST00000075448 (Nfia-001) 97777608-98118871 protein_coding
ENSMUST00000092532 (Nfia-201) 97777626-98118874 protein_coding
ENSMUST00000107057 (Nfia-002) 97777834-98118871 protein_coding
ENSMUST00000107062 (Nfia-003) 97777803-98118871 protein_coding
ENSMUST00000133011 (Nfia-006) 97911033-98042595 processed_transcript
ENSMUST00000148930 (Nfia-007) 97880119-98065355 protein_coding
ENSMUST00000152023 (Nfia-005) 97772734-98000466 protein_coding
ENSMUSG00000081096 (Gm12691)
predicted gene 12691 		ENSMUST00000120186 (Gm12691-001) 98146144-98146599 processed_pseudogene
ENSMUSG00000082388 (Gm12692)
predicted gene 12692 		ENSMUST00000121092 (Gm12692-001) 98234745-98235290 processed_pseudogene
ENSMUSG00000082683 (Gm12697)
predicted gene 12697 		ENSMUST00000118008 (Gm12697-001) 97556404-97557070 processed_pseudogene
ENSMUSG00000084159 (Gm12696)
predicted gene 12696 		ENSMUST00000122361 (Gm12696-001) 97521428-97522332 processed_pseudogene
ENSMUSG00000085710 (Gm12676)
predicted gene 12676 		ENSMUST00000149078 (Gm12676-001) 97754168-97757389 processed_transcript
CIL_0007OH_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
NFIA UCNEbase 7955 22:17015902-17274520
GeneTranscriptPositionBiotype
ENSDARG00000062420 (nfia)
nuclear factor I/A 		ENSDART00000063467 (nfia-201) 17057731-17219218 protein_coding
ENSDART00000090237 (nfia-202) 17061448-17219447 protein_coding
ENSDART00000090242 (nfia-203) 17061448-17219447 protein_coding
ENSDART00000138233 (nfia-001) 17061439-17219859 protein_coding
ENSDART00000138382 (nfia-002) 17121644-17274353 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007OH_0001ENSG00000162599ENST00000357977ENST00000371184ENST00000371185ENST00000371187ENST00000371189ENST00000371191ENST00000403491ENST00000407417ENST00000476646ENST00000479364ENST00000482020ENST00000485903ENST00000493627ENST00000496712ENSG00000226476ENST00000439156ENSG00000231252ENST00000423403ENSG00000237853ENST00000442027ENST00000596354ENST00000596404ENST00000617929ENSG00000237928ENST00000418662ENST00000421455ENST00000438559ENSG00000264551ENST00000580743ENSG00000270742ENST00000603233CIL_0007OH_0002ENSMUSG00000028565ENSMUST00000052018ENSMUST00000075448ENSMUST00000092532ENSMUST00000107057ENSMUST00000107062ENSMUST00000133011ENSMUST00000148930ENSMUST00000152023ENSMUSG00000081096ENSMUST00000120186ENSMUSG00000082388ENSMUST00000121092ENSMUSG00000082683ENSMUST00000118008ENSMUSG00000084159ENSMUST00000122361ENSMUSG00000085710ENSMUST00000149078CIL_0007OH_0003ENSDARG00000062420ENSDART00000063467ENSDART00000090237ENSDART00000090242ENSDART00000138233ENSDART00000138382
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007OH_0001ENSG00000162599ENST00000357977ENST00000371187ENST00000403491ENST00000485903ENST00000493627ENSG00000226476ENST00000439156ENSG00000231252ENST00000423403ENSG00000237853ENST00000442027ENST00000596354ENST00000596404ENST00000617929ENSG00000237928ENST00000418662ENST00000421455ENST00000438559ENSG00000264551ENST00000580743ENSG00000270742ENST00000603233CIL_0007OH_0002ENSMUSG00000028565ENSMUST00000052018ENSMUST00000075448ENSMUST00000092532ENSMUST00000107057ENSMUST00000107062ENSMUST00000148930ENSMUST00000152023ENSMUSG00000081096ENSMUST00000120186ENSMUSG00000082388ENSMUST00000121092ENSMUSG00000082683ENSMUST00000118008ENSMUSG00000084159ENSMUST00000122361ENSMUSG00000085710ENSMUST00000149078CIL_0007OH_0003ENSDARG00000062420ENSDART00000063467
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162599 ENST00000357977 N/A N/A 2.025±0.00 1.524±0.00 4.721±0.00 N/A 2.837±0.00 4.346±0.00 6.737±0.00 2.995±0.00 N/A 2.469±0.00 N/A N/A
ENST00000371184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371187 N/A N/A N/A N/A N/A 5.243±0.00 2.274±0.00 8.734±0.00 9.227±0.00 4.245±0.00 N/A N/A N/A N/A
ENST00000371189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000403491 6.647±0.00 5.506±0.00 1.804±0.00 4.603±3.33 4.968±0.50 6.136±0.36 6.285±3.10 5.983±2.42 8.302±4.80 3.051±1.18 2.247±1.18 5.790±4.25 0.705±0.42 4.453±2.64
ENST00000407417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.105±0.00 N/A N/A N/A
ENST00000493627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.272±0.00 N/A N/A
ENST00000496712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226476 ENST00000439156 N/A 0.044±0.00 N/A 0.417±0.08 0.081±0.04 0.129±0.02 0.048±0.02 N/A 0.027±0.00 0.164±0.00 0.025±0.00 0.542±0.38 0.153±0.11 0.097±0.00
ENSG00000231252 ENST00000423403 0.030±0.00 0.101±0.00 N/A 0.134±0.05 0.040±0.00 0.018±0.00 0.044±0.01 0.069±0.00 0.004±0.00 0.147±0.06 0.004±0.00 0.060±0.04 N/A 0.051±0.02
ENSG00000237853 ENST00000442027 N/A N/A N/A N/A 0.056±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.451±1.10
ENST00000596354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.00
ENST00000596404 N/A 0.023±0.00 N/A 0.031±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617929 0.101±0.00 0.150±0.00 N/A 0.134±0.00 N/A N/A 0.171±0.00 N/A N/A N/A N/A 0.187±0.00 N/A 4.195±0.00
ENSG00000237928 ENST00000418662 0.067±0.00 0.125±0.00 N/A 0.173±0.00 N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A 0.090±0.00 N/A
ENST00000421455 0.187±0.00 0.253±0.00 N/A 0.677±0.09 0.020±0.00 0.108±0.00 N/A N/A 0.059±0.00 N/A N/A 0.083±0.00 N/A 0.036±0.00
ENST00000438559 N/A 0.060±0.00 N/A N/A 0.010±0.00 N/A N/A N/A N/A 0.084±0.00 N/A 0.098±0.02 0.054±0.00 0.066±0.00
ENSG00000264551 ENST00000580743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.249±0.00
ENSG00000270742 ENST00000603233 N/A 0.389±0.00 N/A 0.189±0.00 0.075±0.00 2.662±0.00 0.207±0.04 0.238±0.09 2.867±0.00 2.214±0.00 N/A 0.922±1.08 N/A 0.099±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028565 ENSMUST00000052018 2.826±0.00 5.789±2.33 N/A 0.574±0.00 N/A N/A N/A N/A 1.863±1.24 N/A 0.506±0.30 4.417±1.35 0.116±0.07 N/A
ENSMUST00000075448 6.633±0.98 9.152±3.26 4.953±0.89 10.463±0.22 7.367±1.39 4.063±0.67 4.546±0.86 5.563±0.37 3.019±2.16 6.899±1.00 0.794±0.33 6.601±2.86 0.619±0.52 0.811±0.39
ENSMUST00000092532 2.219±0.00 N/A N/A 1.600±0.00 1.874±0.36 0.776±0.00 1.140±0.23 N/A 0.740±0.51 1.250±0.00 0.254±0.00 1.818±0.62 0.255±0.00 0.191±0.01
ENSMUST00000107057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.390±0.07 0.743±0.00 N/A N/A
ENSMUST00000107062 2.271±0.30 2.936±0.21 2.080±0.52 N/A 2.087±0.86 1.279±0.22 1.700±0.40 1.274±0.40 0.800±0.56 2.271±0.32 0.634±0.28 3.407±0.93 0.177±0.00 0.225±0.04
ENSMUST00000133011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148930 26.915±4.53 20.759±2.94 N/A N/A 25.736±4.32 10.645±2.05 18.349±1.70 13.720±3.82 7.453±4.44 18.518±1.43 N/A 30.983±11.73 N/A 2.508±0.55
ENSMUST00000152023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.531±0.00 N/A
ENSMUSG00000081096 ENSMUST00000120186 N/A N/A N/A 0.198±0.13 N/A N/A 0.179±0.05 0.117±0.00 0.167±0.11 N/A N/A 0.157±0.05 0.306±0.00 N/A
ENSMUSG00000082388 ENSMUST00000121092 N/A N/A N/A 0.042±0.01 N/A 0.126±0.00 0.092±0.02 N/A N/A 0.081±0.00 N/A 0.346±0.29 0.104±0.04 N/A
ENSMUSG00000082683 ENSMUST00000118008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00
ENSMUSG00000084159 ENSMUST00000122361 5.567±1.81 3.333±0.87 6.553±0.40 15.985±2.57 5.160±1.75 5.758±0.92 5.537±0.35 7.917±1.43 8.593±4.02 6.836±0.40 1.245±0.21 11.347±10.30 24.420±17.12 5.655±0.57
ENSMUSG00000085710 ENSMUST00000149078 0.105±0.07 0.086±0.01 N/A 0.134±0.09 0.094±0.04 0.168±0.06 0.077±0.04 0.132±0.09 0.050±0.01 0.106±0.05 0.123±0.04 0.211±0.11 0.035±0.04 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000062420 ENSDART00000063467 N/A N/A N/A 5.895±0.00 N/A N/A 6.820±1.06 3.601±0.76 0.679±0.00 N/A N/A N/A N/A N/A
ENSDART00000090237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000090242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000138233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000138382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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