C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007OU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ZSWIM6 UCNEbase 9606 5:61496745-61738337
GeneTranscriptPositionBiotype
ENSG00000130449 (ZSWIM6)
zinc finger, SWIM-type containing 6 		ENST00000252744 (ZSWIM6-001) 61332273-61546170 protein_coding
ENSG00000178722 (C5orf64)
chromosome 5 open reading frame 64 		ENST00000313303 (C5orf64-201) 61686076-61706535 processed_transcript
ENST00000502395 (C5orf64-002) 61686872-61704183 retained_intron
ENST00000505642 (C5orf64-001) 61637809-61706535 lincRNA
ENST00000507461 (C5orf64-003) 61637708-61751763 lincRNA
ENST00000510414 (C5orf64-006) 61637809-61730378 lincRNA
ENST00000511407 (C5orf64-005) 61637781-61730573 lincRNA
ENSG00000223200 (AC008836.1)
 ENST00000411268 (AC008836.1-201) 61557283-61557367 miRNA
ENSG00000248529 (RP11-2O17.2)
 ENST00000505623 (RP11-2O17.2-003) 61658474-61687899 antisense
ENST00000507264 (RP11-2O17.2-002) 61663059-61687913 antisense
ENST00000513386 (RP11-2O17.2-001) 61663150-61698432 antisense
ENSG00000251575 (CTD-2170G1.2)
 ENST00000506550 (CTD-2170G1.2-001) 61732774-61735668 lincRNA
ENST00000512882 (CTD-2170G1.2-002) 61735138-61735669 lincRNA
ENSG00000279178 (C5orf64)
chromosome 5 open reading frame 64 		ENST00000623076 (C5orf64-202) 61643364-61704033 protein_coding
CIL_0007OU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ZSWIM6 UCNEbase 10090 13:107540388-107767306
GeneTranscriptPositionBiotype
ENSMUSG00000032846 (Zswim6)
zinc finger SWIM-type containing 6 		ENSMUST00000105097 (Zswim6-201) 107724618-107890064 protein_coding
ENSMUSG00000102000 (RP23-125L8.1)
RIKEN cDNA 1700006H21 gene 		ENSMUST00000188490 (RP23-125L8.1-001) 107687397-107692173 lincRNA
ENSMUST00000188960 (RP23-125L8.1-002) 107687397-107692162 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007OU_0001ENSG00000130449ENST00000252744ENSG00000178722ENST00000313303ENST00000502395ENST00000505642ENST00000507461ENST00000510414ENST00000511407ENSG00000223200ENST00000411268ENSG00000248529ENST00000505623ENST00000507264ENST00000513386ENSG00000251575ENST00000506550ENST00000512882ENSG00000279178ENST00000623076CIL_0007OU_0002ENSMUSG00000032846ENSMUST00000105097ENSMUSG00000102000ENSMUST00000188490ENSMUST00000188960
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007OU_0001ENSG00000130449ENST00000252744ENSG00000178722ENST00000313303ENST00000505642ENST00000507461ENST00000511407ENSG00000223200ENST00000411268ENSG00000248529ENST00000505623ENST00000507264ENST00000513386ENSG00000251575ENST00000506550ENST00000512882ENSG00000279178ENST00000623076CIL_0007OU_0002ENSMUSG00000032846ENSMUST00000105097ENSMUSG00000102000ENSMUST00000188490ENSMUST00000188960
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130449 ENST00000252744 1.867±0.00 1.440±0.00 N/A 5.258±0.00 2.312±0.00 2.199±0.00 1.631±0.00 1.791±1.17 0.970±0.16 4.368±1.75 0.868±0.06 1.381±0.69 1.042±0.34 3.740±0.16
ENSG00000178722 ENST00000313303 0.051±0.00 0.067±0.00 N/A 0.296±0.00 0.447±0.00 0.031±0.00 0.018±0.00 0.058±0.00 0.025±0.01 0.006±0.00 N/A 0.021±0.00 0.024±0.00 N/A
ENST00000502395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505642 N/A N/A N/A 0.683±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00
ENST00000507461 N/A N/A N/A 1.231±0.00 N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A 0.055±0.01
ENST00000510414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511407 N/A 0.134±0.00 N/A 1.272±0.00 N/A 0.722±0.00 N/A N/A N/A N/A N/A 0.065±0.00 N/A 0.099±0.00
ENSG00000223200 ENST00000411268 0.261±0.00 0.254±0.00 N/A N/A N/A N/A N/A N/A N/A 2.057±0.00 N/A N/A N/A N/A
ENSG00000248529 ENST00000505623 N/A N/A 0.089±0.00 0.086±0.05 N/A N/A 0.031±0.02 N/A N/A N/A N/A N/A N/A 0.291±0.00
ENST00000507264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.120±0.00
ENST00000513386 N/A N/A N/A 0.066±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.345±0.54
ENSG00000251575 ENST00000506550 N/A N/A N/A N/A N/A N/A N/A 0.090±0.00 0.018±0.00 N/A N/A N/A N/A 3.478±1.48
ENST00000512882 N/A N/A N/A N/A N/A N/A N/A 0.156±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000279178 ENST00000623076 N/A N/A N/A N/A N/A 0.199±0.00 0.354±0.00 N/A 0.086±0.00 N/A N/A N/A 0.253±0.00 0.191±0.15
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032846 ENSMUST00000105097 4.680±2.06 3.575±0.85 2.593±1.13 6.370±3.05 4.073±0.51 5.532±1.39 1.343±0.43 3.772±0.33 0.973±0.34 6.556±1.58 0.235±0.03 5.849±1.90 0.825±0.32 7.242±3.06
ENSMUSG00000102000 ENSMUST00000188490 N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A 1.275±0.69
ENSMUST00000188960 N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.161±0.00 0.016±0.00 4.256±0.74

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