C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007PX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs856 VISTA 9606 X:148447492-149048635
GeneTranscriptPositionBiotype
ENSG00000155966 (AFF2)
AF4/FMR2 family, member 2
ENST00000286437 (AFF2-201) 148719091-149000663 protein_coding
ENST00000342251 (AFF2-003) 148500708-148994424 protein_coding
ENST00000370457 (AFF2-202) 148500619-149000663 protein_coding
ENST00000370458 (AFF2-002) 148501009-148904377 protein_coding
ENST00000370460 (AFF2-001) 148500619-149000663 protein_coding
ENSG00000176970 (RPL7L1P11)
ribosomal protein L7-like 1 pseudogene 11
ENST00000446092 (RPL7L1P11-001) 148464708-148465428 processed_pseudogene
ENSG00000222313 (RN7SKP267)
RNA, 7SK small nuclear pseudogene 267
ENST00000410381 (RN7SKP267-201) 148822164-148822448 misc_RNA
ENSG00000223516 (AFF2-IT1)
AFF2 intronic transcript 1 (non-protein coding)
ENST00000435346 (AFF2-IT1-001) 148546878-148547397 sense_intronic
ENSG00000237741 (AC002368.4)
ENST00000456981 (AC002368.4-001) 148498113-148500615 antisense
CIL_0007PX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs856 VISTA 10090 X:69323406-69924546
GeneTranscriptPositionBiotype
ENSMUSG00000031189 (Aff2)
AF4/FMR2 family, member 2
ENSMUST00000033532 (Aff2-001) 69360294-69868037 protein_coding
ENSMUST00000139977 (Aff2-004) 69360505-69544623 processed_transcript
ENSMUST00000143097 (Aff2-002) 69360700-69785176 processed_transcript
ENSMUST00000151662 (Aff2-003) 69856695-69866777 retained_intron
ENSMUSG00000082926 (Gm8172)
predicted pseudogene 8172
ENSMUST00000120762 (Gm8172-001) 69605496-69606245 processed_pseudogene
ENSMUSG00000086676 (Gm14705)
predicted gene 14705
ENSMUST00000154109 (Gm14705-001) 69356596-69361269 antisense
ENSMUST00000187253 (Gm14705-002) 69357958-69360341 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007PX_0001ENSG00000155966ENST00000286437ENST00000342251ENST00000370457ENST00000370458ENST00000370460ENSG00000176970ENST00000446092ENSG00000222313ENST00000410381ENSG00000223516ENST00000435346ENSG00000237741ENST00000456981CIL_0007PX_0002ENSMUSG00000031189ENSMUST00000033532ENSMUST00000139977ENSMUST00000143097ENSMUST00000151662ENSMUSG00000082926ENSMUST00000120762ENSMUSG00000086676ENSMUST00000154109ENSMUST00000187253
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007PX_0001ENSG00000155966ENST00000286437ENST00000342251ENST00000370457ENST00000370458ENSG00000176970ENST00000446092ENSG00000222313ENST00000410381ENSG00000223516ENST00000435346ENSG00000237741ENST00000456981CIL_0007PX_0002ENSMUSG00000031189ENSMUST00000033532ENSMUST00000139977ENSMUST00000143097ENSMUST00000151662ENSMUSG00000082926ENSMUST00000120762ENSMUSG00000086676ENSMUST00000154109
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000155966 ENST00000286437 N/A 0.037±0.00 N/A 0.346±0.00 0.176±0.00 0.024±0.00 0.011±0.00 N/A 0.009±0.00 0.100±0.00 N/A 0.174±0.21 1.022±0.19 0.677±0.24
ENST00000342251 0.109±0.00 0.019±0.00 0.094±0.00 0.793±0.32 0.198±0.11 0.116±0.00 0.029±0.00 0.213±0.00 N/A 0.612±0.07 0.086±0.00 0.196±0.17 1.453±0.41 0.748±0.26
ENST00000370457 N/A 0.012±0.00 N/A 0.488±0.07 N/A 0.008±0.00 N/A 0.048±0.00 0.124±0.00 0.621±0.00 N/A N/A 0.570±0.00 0.200±0.00
ENST00000370458 N/A N/A N/A 3.126±0.00 N/A 0.415±0.00 0.074±0.00 0.026±0.00 0.641±0.00 1.787±0.00 N/A 1.265±0.00 N/A N/A
ENST00000370460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176970 ENST00000446092 N/A N/A N/A N/A N/A N/A N/A 0.098±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000222313 ENST00000410381 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.434±0.00 N/A N/A N/A N/A
ENSG00000223516 ENST00000435346 N/A N/A 0.268±0.00 N/A N/A N/A N/A N/A N/A 2.426±0.00 N/A 0.925±0.85 N/A N/A
ENSG00000237741 ENST00000456981 N/A N/A N/A 0.074±0.00 N/A N/A N/A N/A N/A N/A N/A 0.132±0.00 0.195±0.11 0.115±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031189 ENSMUST00000033532 0.307±0.25 0.427±0.07 N/A 3.238±0.80 0.195±0.08 0.112±0.03 0.277±0.24 0.042±0.02 0.033±0.03 0.574±0.27 0.022±0.02 6.076±2.79 0.758±0.00 0.209±0.14
ENSMUST00000139977 N/A 0.708±0.18 N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A N/A
ENSMUST00000143097 N/A N/A N/A N/A N/A N/A N/A 0.038±0.02 0.042±0.00 N/A N/A N/A N/A 0.075±0.00
ENSMUST00000151662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A
ENSMUSG00000082926 ENSMUST00000120762 0.159±0.00 N/A 0.200±0.02 0.687±0.26 0.252±0.11 N/A 0.073±0.03 0.063±0.01 0.083±0.05 0.146±0.07 0.112±0.05 0.338±0.14 0.229±0.14 0.056±0.01
ENSMUSG00000086676 ENSMUST00000154109 N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000187253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading