C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007QO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm642 VISTA 9606 8:126288458-126889589
GeneTranscriptPositionBiotype
ENSG00000168672 (FAM84B)
family with sequence similarity 84, member B 		ENST00000304916 (FAM84B-001) 126552442-126558393 protein_coding
ENST00000517458 (FAM84B-002) 126552815-126556419 processed_transcript
ENSG00000207138 (RNU6-869P)
RNA, U6 small nuclear 869, pseudogene 		ENST00000384409 (RNU6-869P-201) 126504763-126504869 snRNA
ENSG00000212451 (RNU11-4P)
RNA, U11 small nuclear 4, pseudogene 		ENST00000391149 (RNU11-4P-201) 126671522-126671654 snRNA
ENSG00000244791 (RP11-65D17.1)
 ENST00000500180 (RP11-65D17.1-001) 126325495-126329535 lincRNA
ENSG00000253220 (RP11-103H7.2)
 ENST00000521428 (RP11-103H7.2-001) 126498149-126500303 lincRNA
ENSG00000253438 (PCAT1)
prostate cancer associated transcript 1 (non-protein coding) 		ENST00000519319 (PCAT1-001) 126847055-127013713 lincRNA
ENST00000561978 (PCAT1-002) 127013154-127021014 lincRNA
ENSG00000253530 (RP11-103H7.3)
 ENST00000519123 (RP11-103H7.3-001) 126518698-126522351 lincRNA
ENSG00000253543 (RP11-89K10.2)
 ENST00000523708 (RP11-89K10.2-001) 126582631-126583006 processed_pseudogene
ENSG00000254286 (RP11-89K10.1)
 ENST00000517773 (RP11-89K10.1-002) 126557886-126617741 antisense
ENST00000517915 (RP11-89K10.1-003) 126589214-126634784 antisense
ENST00000519880 (RP11-89K10.1-001) 126557875-126713415 antisense
ENST00000520512 (RP11-89K10.1-004) 126557895-126676413 antisense
CIL_0007QO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm642 VISTA 10090 15:60552996-61154287
GeneTranscriptPositionBiotype
ENSMUSG00000022347 (A1bg)
alpha-1-B glycoprotein 		ENSMUST00000096418 (A1bg-201) 60917589-60921270 protein_coding
ENSMUSG00000072568 (Fam84b)
family with sequence similarity 84, member B 		ENSMUST00000100635 (Fam84b-001) 60818994-60825080 protein_coding
ENSMUST00000186536 (Fam84b-002) 60825032-60853778 processed_transcript
ENSMUSG00000097493 (9930014A18Rik)
RIKEN cDNA 9930014A18 gene 		ENSMUST00000180730 (9930014A18Rik-002) 60822271-60828650 antisense
ENSMUST00000181910 (9930014A18Rik-001) 60824341-60831793 antisense
ENSMUST00000186605 (9930014A18Rik-004) 60823402-60823939 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007QO_0001ENSG00000168672ENST00000304916ENST00000517458ENSG00000207138ENST00000384409ENSG00000212451ENST00000391149ENSG00000244791ENST00000500180ENSG00000253220ENST00000521428ENSG00000253438ENST00000519319ENST00000561978ENSG00000253530ENST00000519123ENSG00000253543ENST00000523708ENSG00000254286ENST00000517773ENST00000517915ENST00000519880ENST00000520512CIL_0007QO_0002ENSMUSG00000022347ENSMUST00000096418ENSMUSG00000072568ENSMUST00000100635ENSMUST00000186536ENSMUSG00000097493ENSMUST00000180730ENSMUST00000181910ENSMUST00000186605
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007QO_0001ENSG00000168672ENST00000304916ENST00000517458ENSG00000207138ENST00000384409ENSG00000212451ENST00000391149ENSG00000244791ENST00000500180ENSG00000253220ENST00000521428ENSG00000253438ENST00000519319ENST00000561978ENSG00000253530ENST00000519123ENSG00000253543ENST00000523708ENSG00000254286ENST00000517773ENST00000517915ENST00000519880ENST00000520512CIL_0007QO_0002ENSMUSG00000022347ENSMUST00000096418ENSMUSG00000072568ENSMUST00000100635ENSMUSG00000097493ENSMUST00000180730
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168672 ENST00000304916 4.347±0.00 5.401±0.00 1.603±0.00 2.539±1.26 4.383±2.16 1.635±0.19 1.384±0.65 8.640±5.93 1.214±0.28 3.207±0.74 0.376±0.02 4.280±2.23 3.802±0.29 1.351±0.27
ENST00000517458 N/A 4.229±0.00 N/A N/A 4.105±0.00 1.550±0.04 N/A 5.512±2.27 1.236±0.00 3.023±0.00 0.574±0.00 4.384±0.82 N/A 1.861±0.00
ENSG00000207138 ENST00000384409 N/A N/A N/A N/A 0.193±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212451 ENST00000391149 N/A N/A N/A N/A 0.662±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000244791 ENST00000500180 0.046±0.00 0.186±0.00 N/A 0.068±0.00 0.046±0.00 N/A N/A 0.082±0.00 0.056±0.00 0.040±0.00 N/A 0.131±0.15 0.064±0.02 0.271±0.03
ENSG00000253220 ENST00000521428 N/A 0.071±0.00 N/A N/A 0.037±0.00 N/A N/A N/A 0.063±0.00 N/A N/A 0.758±0.00 0.121±0.00 0.267±0.06
ENSG00000253438 ENST00000519319 N/A N/A N/A N/A N/A N/A 0.070±0.00 0.577±0.00 N/A N/A N/A N/A N/A 0.119±0.01
ENST00000561978 0.124±0.00 0.304±0.00 N/A 0.136±0.00 0.180±0.00 0.152±0.00 0.030±0.00 0.221±0.00 0.042±0.00 0.050±0.00 0.019±0.00 0.052±0.02 0.019±0.01 0.088±0.05
ENSG00000253530 ENST00000519123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00
ENSG00000253543 ENST00000523708 N/A 0.085±0.00 N/A 0.045±0.00 0.043±0.00 N/A N/A N/A 0.038±0.00 N/A N/A 0.097±0.00 N/A 0.038±0.00
ENSG00000254286 ENST00000517773 N/A 0.112±0.00 N/A N/A N/A N/A N/A 0.129±0.00 N/A 0.329±0.02 N/A 0.467±0.33 0.110±0.00 2.623±0.54
ENST00000517915 N/A 0.224±0.00 N/A N/A 0.134±0.00 N/A N/A N/A 0.064±0.00 0.085±0.00 N/A N/A N/A N/A
ENST00000519880 N/A 0.229±0.00 0.422±0.00 N/A N/A N/A 0.127±0.00 N/A N/A 0.632±0.00 N/A 0.166±0.00 N/A N/A
ENST00000520512 N/A N/A N/A N/A N/A N/A 0.079±0.04 0.161±0.00 0.060±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022347 ENSMUST00000096418 0.146±0.00 0.143±0.03 0.004±0.00 0.020±0.01 0.041±0.01 0.048±0.02 0.047±0.02 0.031±0.01 567.910±568.57 0.029±0.01 0.096±0.06 0.292±0.15 N/A 0.124±0.05
ENSMUSG00000072568 ENSMUST00000100635 1.593±0.23 0.966±0.24 5.853±0.66 1.586±0.84 1.390±0.25 1.622±0.11 0.988±0.28 3.520±0.45 1.775±0.74 6.400±0.78 0.843±0.15 3.948±2.86 2.148±2.54 0.210±0.10
ENSMUST00000186536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097493 ENSMUST00000180730 5.497±1.02 6.904±2.91 6.244±1.17 2.368±0.85 8.223±3.92 17.204±2.59 2.315±0.09 13.269±1.95 4.071±2.51 30.128±4.99 0.558±0.15 17.378±6.17 0.492±0.13 0.617±0.24
ENSMUST00000181910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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