C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007QX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs683 VISTA 9606 1:60321185-60922199
GeneTranscriptPositionBiotype
ENSG00000162599 (NFIA)
nuclear factor I/A 		ENST00000357977 (NFIA-008) 61404076-61458037 protein_coding
ENST00000371184 (NFIA-006) 61082754-61455487 protein_coding
ENST00000371185 (NFIA-005) 61082748-61455526 protein_coding
ENST00000371187 (NFIA-003) 61082621-61456394 protein_coding
ENST00000371189 (NFIA-015) 61081862-61455562 protein_coding
ENST00000371191 (NFIA-002) 60865259-61455525 protein_coding
ENST00000403491 (NFIA-001) 61082308-61462793 protein_coding
ENST00000407417 (NFIA-014) 61077274-61455585 protein_coding
ENST00000476646 (NFIA-013) 61053830-61332586 protein_coding
ENST00000479364 (NFIA-009) 61081767-61406727 processed_transcript
ENST00000482020 (NFIA-010) 61352450-61404226 protein_coding
ENST00000485903 (NFIA-007) 61082723-61455524 protein_coding
ENST00000493627 (NFIA-011) 61406672-61455874 protein_coding
ENST00000496712 (NFIA-012) 61088412-61133028 protein_coding
ENSG00000226476 (RP11-776H12.1)
 ENST00000439156 (RP11-776H12.1-001) 60540249-60640491 lincRNA
ENSG00000231252 (RP11-436K8.1)
 ENST00000423403 (RP11-436K8.1-001) 60659631-60825584 lincRNA
CIL_0007QX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs683 VISTA 10090 4:97077584-97678602
GeneTranscriptPositionBiotype
ENSMUSG00000082683 (Gm12697)
predicted gene 12697 		ENSMUST00000118008 (Gm12697-001) 97556404-97557070 processed_pseudogene
ENSMUSG00000084159 (Gm12696)
predicted gene 12696 		ENSMUST00000122361 (Gm12696-001) 97521428-97522332 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007QX_0001ENSG00000162599ENST00000357977ENST00000371184ENST00000371185ENST00000371187ENST00000371189ENST00000371191ENST00000403491ENST00000407417ENST00000476646ENST00000479364ENST00000482020ENST00000485903ENST00000493627ENST00000496712ENSG00000226476ENST00000439156ENSG00000231252ENST00000423403CIL_0007QX_0002ENSMUSG00000082683ENSMUST00000118008ENSMUSG00000084159ENSMUST00000122361
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007QX_0001ENSG00000162599ENST00000357977ENST00000371187ENST00000403491ENST00000485903ENST00000493627ENSG00000226476ENST00000439156ENSG00000231252ENST00000423403CIL_0007QX_0002ENSMUSG00000082683ENSMUST00000118008ENSMUSG00000084159ENSMUST00000122361
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162599 ENST00000357977 N/A N/A 2.025±0.00 1.524±0.00 4.721±0.00 N/A 2.837±0.00 4.346±0.00 6.737±0.00 2.995±0.00 N/A 2.469±0.00 N/A N/A
ENST00000371184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371187 N/A N/A N/A N/A N/A 5.243±0.00 2.274±0.00 8.734±0.00 9.227±0.00 4.245±0.00 N/A N/A N/A N/A
ENST00000371189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000403491 6.647±0.00 5.506±0.00 1.804±0.00 4.603±3.33 4.968±0.50 6.136±0.36 6.285±3.10 5.983±2.42 8.302±4.80 3.051±1.18 2.247±1.18 5.790±4.25 0.705±0.42 4.453±2.64
ENST00000407417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.105±0.00 N/A N/A N/A
ENST00000493627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.272±0.00 N/A N/A
ENST00000496712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226476 ENST00000439156 N/A 0.044±0.00 N/A 0.417±0.08 0.081±0.04 0.129±0.02 0.048±0.02 N/A 0.027±0.00 0.164±0.00 0.025±0.00 0.542±0.38 0.153±0.11 0.097±0.00
ENSG00000231252 ENST00000423403 0.030±0.00 0.101±0.00 N/A 0.134±0.05 0.040±0.00 0.018±0.00 0.044±0.01 0.069±0.00 0.004±0.00 0.147±0.06 0.004±0.00 0.060±0.04 N/A 0.051±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000082683 ENSMUST00000118008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00
ENSMUSG00000084159 ENSMUST00000122361 5.567±1.81 3.333±0.87 6.553±0.40 15.985±2.57 5.160±1.75 5.758±0.92 5.537±0.35 7.917±1.43 8.593±4.02 6.836±0.40 1.245±0.21 11.347±10.30 24.420±17.12 5.655±0.57

Loading