C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007R6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs688 VISTA 9606 20:20192309-20793556
GeneTranscriptPositionBiotype
ENSG00000089101 (CFAP61)
cilia and flagella associated protein 61 		ENST00000245957 (CFAP61-004) 20052552-20360702 protein_coding
ENST00000340348 (CFAP61-014) 20052514-20166441 protein_coding
ENST00000377293 (CFAP61-005) 20221940-20265833 protein_coding
ENST00000377303 (CFAP61-016) 20052558-20075616 protein_coding
ENST00000377306 (CFAP61-007) 20052552-20172336 protein_coding
ENST00000377308 (CFAP61-003) 20225461-20360698 nonsense_mediated_decay
ENST00000389656 (CFAP61-201) 20228246-20265616 protein_coding
ENST00000431753 (CFAP61-010) 20169379-20228447 protein_coding
ENST00000442372 (CFAP61-008) 20085462-20166428 nonsense_mediated_decay
ENST00000451767 (CFAP61-202) 20056646-20172333 protein_coding
ENST00000468719 (CFAP61-011) 20196653-20251763 processed_transcript
ENST00000469994 (CFAP61-021) 20290302-20322814 processed_transcript
ENST00000471716 (CFAP61-020) 20184561-20196714 processed_transcript
ENST00000472660 (CFAP61-019) 20073892-20098749 protein_coding
ENST00000475466 (CFAP61-017) 20052579-20075224 protein_coding
ENST00000476414 (CFAP61-012) 20196653-20251763 processed_transcript
ENST00000486624 (CFAP61-002) 20226087-20228614 processed_transcript
ENST00000488640 (CFAP61-006) 20262971-20290357 processed_transcript
ENST00000493330 (CFAP61-001) 20220129-20225322 processed_transcript
ENST00000494029 (CFAP61-018) 20052558-20074378 nonsense_mediated_decay
ENST00000497372 (CFAP61-013) 20220167-20232926 processed_transcript
ENSG00000173404 (INSM1)
insulinoma-associated 1 		ENST00000310227 (INSM1-001) 20368121-20370949 protein_coding
ENSG00000188559 (RALGAPA2)
Ral GTPase activating protein, alpha subunit 2 (catalytic) 		ENST00000202677 (RALGAPA2-008) 20392767-20712488 protein_coding
ENST00000424981 (RALGAPA2-005) 20635351-20640806 retained_intron
ENST00000427175 (RALGAPA2-007) 20470933-20512600 protein_coding
ENST00000430436 (RALGAPA2-002) 20389552-20639900 protein_coding
ENST00000495793 (RALGAPA2-003) 20598784-20605412 processed_transcript
ENST00000620717 (RALGAPA2-201) 20392768-20512658 protein_coding
ENSG00000213384 (EIF4E2P1)
eukaryotic translation initiation factor 4E family member 2 pseudogene 1 		ENST00000393781 (EIF4E2P1-001) 20659710-20659964 processed_pseudogene
ENSG00000225417 (RP5-1178H5.2)
 ENST00000443692 (RP5-1178H5.2-001) 20214299-20215262 antisense
ENSG00000229500 (RPL17P1)
ribosomal protein L17 pseudogene 1 		ENST00000445304 (RPL17P1-001) 20253303-20253838 processed_pseudogene
ENSG00000243810 (RP5-1096J16.1)
 ENST00000460400 (RP5-1096J16.1-001) 20258407-20267809 antisense
ENSG00000264879 (RN7SL690P)
RNA, 7SL, cytoplasmic 690, pseudogene 		ENST00000582087 (RN7SL690P-201) 20316755-20316994 misc_RNA
ENSG00000278525 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000461220 (Metazoa_SRP.1-476) 20738433-20738731 misc_RNA
ENSG00000280229 (RP11-470C13.4)
 ENST00000623641 (RP11-470C13.4-001) 20363691-20365657 TEC
CIL_0007R6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs688 VISTA 10090 2:146024701-146625932
GeneTranscriptPositionBiotype
ENSMUSG00000042938 (Gm14117)
predicted gene 14117 		ENSMUST00000122417 (Gm14117-001) 146305547-146306389 processed_pseudogene
ENSMUSG00000068154 (Insm1)
insulinoma-associated 1 		ENSMUST00000089257 (Insm1-001) 146221921-146225020 protein_coding
ENSMUSG00000085796 (4933406D12Rik)
RIKEN cDNA 4933406D12 gene 		ENSMUST00000147212 (4933406D12Rik-001) 146542931-146546108 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007R6_0001ENSG00000089101ENST00000245957ENST00000472660ENSG00000173404ENST00000310227ENSG00000188559ENST00000202677ENST00000430436ENST00000495793ENSG00000213384ENST00000393781ENSG00000225417ENST00000443692ENSG00000229500ENST00000445304ENSG00000243810ENST00000460400ENSG00000264879ENST00000582087ENSG00000278525ENST00000461220ENSG00000280229ENST00000623641CIL_0007R6_0002ENSMUSG00000042938ENSMUST00000122417ENSMUSG00000068154ENSMUST00000089257ENSMUSG00000085796ENSMUST00000147212
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000089101 ENST00000245957 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.781±0.00 N/A N/A N/A 7.846±0.72
ENST00000340348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000389656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.275±0.00 N/A N/A N/A
ENST00000475466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000173404 ENST00000310227 N/A 0.026±0.00 N/A 0.709±0.47 0.043±0.00 0.289±0.19 0.009±0.00 0.009±0.00 N/A 0.136±0.08 N/A 0.069±0.04 N/A 0.838±0.18
ENSG00000188559 ENST00000202677 N/A 1.476±0.00 2.484±0.00 N/A N/A 3.009±0.00 N/A 3.131±0.00 N/A N/A 1.944±0.00 4.798±0.00 N/A 0.891±0.00
ENST00000424981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430436 4.480±0.00 2.545±0.00 1.674±0.00 0.471±0.20 3.312±1.65 1.549±0.00 0.449±0.00 4.825±0.69 2.695±0.98 4.826±1.31 2.917±0.00 3.113±2.23 3.190±0.50 2.734±1.13
ENST00000495793 N/A N/A 11.599±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213384 ENST00000393781 0.218±0.00 N/A N/A N/A N/A N/A N/A 2.808±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000225417 ENST00000443692 N/A N/A N/A N/A N/A N/A 0.252±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000229500 ENST00000445304 0.026±0.00 0.027±0.00 0.243±0.00 N/A 0.110±0.00 N/A 0.101±0.00 N/A N/A N/A N/A N/A N/A 0.169±0.00
ENSG00000243810 ENST00000460400 0.068±0.00 N/A N/A 0.122±0.00 0.076±0.00 N/A 0.065±0.00 N/A N/A 0.297±0.00 N/A N/A 0.186±0.00 0.131±0.00
ENSG00000264879 ENST00000582087 0.491±0.00 0.892±0.00 N/A 0.196±0.00 1.336±0.00 0.257±0.00 0.633±0.00 0.835±0.00 N/A 0.091±0.00 0.231±0.00 N/A N/A 0.153±0.01
ENSG00000278525 ENST00000461220 N/A N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A 0.060±0.00 N/A N/A N/A N/A
ENSG00000280229 ENST00000623641 N/A N/A N/A 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042938 ENSMUST00000122417 0.622±0.22 0.387±0.08 0.451±0.28 0.582±0.07 1.066±0.62 0.741±0.27 1.732±0.26 0.580±0.21 0.533±0.32 0.797±0.42 0.386±0.18 1.381±0.57 0.399±0.17 0.469±0.19
ENSMUSG00000068154 ENSMUST00000089257 0.012±0.00 4.203±1.68 0.021±0.00 17.317±13.64 2.292±1.59 2.162±0.28 0.010±0.00 0.072±0.04 0.035±0.06 0.116±0.06 0.147±0.00 0.308±0.16 0.035±0.02 0.015±0.01
ENSMUSG00000085796 ENSMUST00000147212 N/A N/A 0.049±0.01 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.494±0.24

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