C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007SJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2119 VISTA 9606 3:171005102-171609864
GeneTranscriptPositionBiotype
ENSG00000075651 (PLD1)
phospholipase D1, phosphatidylcholine-specific 		ENST00000331659 (PLD1-201) 171791790-171809924 protein_coding
ENST00000351298 (PLD1-001) 171600826-171810494 protein_coding
ENST00000356327 (PLD1-002) 171600405-171810438 protein_coding
ENST00000418087 (PLD1-010) 171735501-171771359 protein_coding
ENST00000440204 (PLD1-011) 171726004-171810462 nonsense_mediated_decay
ENST00000446289 (PLD1-003) 171611466-171674516 protein_coding
ENST00000460926 (PLD1-007) 171788567-171810441 processed_transcript
ENST00000463281 (PLD1-017) 171600405-171602338 processed_transcript
ENST00000465816 (PLD1-014) 171612279-171666305 processed_transcript
ENST00000467432 (PLD1-015) 171612307-171643154 retained_intron
ENST00000471075 (PLD1-004) 171653242-171677853 retained_intron
ENST00000475273 (PLD1-016) 171721354-171737932 processed_transcript
ENST00000481505 (PLD1-013) 171688695-171708870 retained_intron
ENST00000489995 (PLD1-009) 171765129-171771385 processed_transcript
ENST00000497307 (PLD1-006) 171788581-171810950 processed_transcript
ENST00000498278 (PLD1-012) 171713878-171810437 retained_intron
ENSG00000154310 (TNIK)
TRAF2 and NCK interacting kinase 		ENST00000284483 (TNIK-004) 171063881-171460063 protein_coding
ENST00000341852 (TNIK-003) 171063330-171460408 protein_coding
ENST00000357327 (TNIK-006) 171063881-171460063 protein_coding
ENST00000436636 (TNIK-001) 171061339-171460408 protein_coding
ENST00000459881 (TNIK-017) 171066487-171071406 retained_intron
ENST00000460047 (TNIK-007) 171063881-171460063 protein_coding
ENST00000464785 (TNIK-016) 171063552-171064042 processed_transcript
ENST00000465393 (TNIK-002) 171346934-171460405 protein_coding
ENST00000468757 (TNIK-012) 171157551-171225711 protein_coding
ENST00000470834 (TNIK-009) 171063881-171460063 protein_coding
ENST00000475336 (TNIK-005) 171063881-171460063 protein_coding
ENST00000484051 (TNIK-011) 171066374-171082682 retained_intron
ENST00000487846 (TNIK-015) 171066470-171079583 retained_intron
ENST00000488470 (TNIK-008) 171063881-171460063 protein_coding
ENST00000496492 (TNIK-010) 171063261-171102072 retained_intron
ENSG00000163581 (SLC2A2)
solute carrier family 2 (facilitated glucose transporter), member 2 		ENST00000314251 (SLC2A2-001) 170996348-171026750 protein_coding
ENST00000461867 (SLC2A2-007) 171005420-171018623 protein_coding
ENST00000469787 (SLC2A2-003) 170997755-171026743 nonsense_mediated_decay
ENST00000471379 (SLC2A2-004) 171005416-171007470 retained_intron
ENST00000497642 (SLC2A2-002) 170996820-171026720 nonsense_mediated_decay
ENSG00000222506 (Y_RNA)
Y RNA 		ENST00000410574 (Y_RNA.1-806) 171439526-171439627 misc_RNA
ENSG00000234594 (RP11-263C16.2)
 ENST00000420943 (RP11-263C16.2-001) 171534423-171534615 processed_pseudogene
ENSG00000240497 (RP11-185E8.1)
 ENST00000467896 (RP11-185E8.1-001) 171468084-171469633 lincRNA
ENSG00000279673 (RP11-185E8.2)
 ENST00000623631 (RP11-185E8.2-001) 171460612-171462256 TEC
CIL_0007SJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2119 VISTA 10090 3:28120093-28722161
GeneTranscriptPositionBiotype
ENSMUSG00000027690 (Slc2a2)
solute carrier family 2 (facilitated glucose transporter), member 2 		ENSMUST00000029240 (Slc2a2-001) 28697903-28728356 protein_coding
ENSMUST00000163536 (Slc2a2-003) 28698017-28727476 nonsense_mediated_decay
ENSMUST00000169047 (Slc2a2-002) 28721517-28728327 retained_intron
ENSMUSG00000027692 (Tnik)
TRAF2 and NCK interacting kinase 		ENSMUST00000159236 (Tnik-001) 28263215-28675858 protein_coding
ENSMUST00000159308 (Tnik-011) 28263643-28667982 protein_coding
ENSMUST00000159680 (Tnik-010) 28263563-28668223 protein_coding
ENSMUST00000159733 (Tnik-006) 28650027-28665945 retained_intron
ENSMUST00000160307 (Tnik-007) 28263563-28668223 protein_coding
ENSMUST00000160518 (Tnik-008) 28263643-28667982 protein_coding
ENSMUST00000160934 (Tnik-003) 28263214-28670585 nonsense_mediated_decay
ENSMUST00000161214 (Tnik-005) 28263276-28360786 retained_intron
ENSMUST00000161234 (Tnik-002) 28263276-28494134 retained_intron
ENSMUST00000161423 (Tnik-004) 28409431-28596083 processed_transcript
ENSMUST00000161964 (Tnik-014) 28263643-28667982 protein_coding
ENSMUST00000162037 (Tnik-016) 28263563-28666449 retained_intron
ENSMUST00000162225 (Tnik-015) 28629872-28638469 retained_intron
ENSMUST00000162485 (Tnik-009) 28263643-28667982 protein_coding
ENSMUST00000162777 (Tnik-013) 28263643-28667982 protein_coding
ENSMUSG00000027695 (Pld1)
phospholipase D1 		ENSMUST00000067757 (Pld1-002) 27984314-28133234 protein_coding
ENSMUST00000120834 (Pld1-001) 27938695-28133239 protein_coding
ENSMUST00000123539 (Pld1-004) 27984173-28132050 nonsense_mediated_decay
ENSMUST00000125338 (Pld1-007) 27950003-28028687 protein_coding
ENSMUST00000126594 (Pld1-009) 28109759-28130795 protein_coding
ENSMUST00000127139 (Pld1-005) 27950002-27957400 processed_transcript
ENSMUST00000131842 (Pld1-006) 28069514-28086686 retained_intron
ENSMUST00000148827 (Pld1-003) 28031262-28133362 protein_coding
ENSMUST00000149017 (Pld1-008) 28041266-28046797 processed_transcript
ENSMUSG00000091329 (1700112D23Rik)
RIKEN cDNA 1700112D23 gene 		ENSMUST00000167704 (1700112D23Rik-001) 28702667-28781108 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007SJ_0001ENSG00000075651ENST00000331659ENST00000351298ENST00000356327ENST00000440204ENST00000460926ENST00000465816ENSG00000154310ENST00000284483ENST00000341852ENST00000357327ENST00000436636ENST00000468757ENST00000470834ENST00000475336ENST00000496492ENSG00000163581ENST00000314251ENST00000461867ENST00000469787ENST00000497642ENSG00000222506ENST00000410574ENSG00000234594ENST00000420943ENSG00000240497ENST00000467896ENSG00000279673ENST00000623631CIL_0007SJ_0002ENSMUSG00000027690ENSMUST00000029240ENSMUST00000163536ENSMUST00000169047ENSMUSG00000027692ENSMUST00000159236ENSMUST00000159308ENSMUST00000159680ENSMUST00000160307ENSMUST00000160518ENSMUST00000160934ENSMUST00000161214ENSMUST00000161423ENSMUST00000161964ENSMUST00000162037ENSMUST00000162485ENSMUST00000162777ENSMUSG00000027695ENSMUST00000067757ENSMUST00000120834ENSMUST00000123539ENSMUST00000131842ENSMUST00000148827ENSMUSG00000091329ENSMUST00000167704
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000075651 ENST00000331659 0.096±0.00 0.143±0.00 0.076±0.00 0.155±0.02 0.784±0.77 0.564±0.51 0.024±0.00 0.016±0.00 0.222±0.00 0.150±0.00 N/A 0.380±0.26 0.042±0.04 0.101±0.06
ENST00000351298 3.061±0.00 1.528±0.00 N/A 1.537±0.52 1.927±0.67 2.020±0.35 3.809±1.75 2.641±1.55 1.313±0.64 1.416±0.06 0.185±0.15 2.237±1.05 1.612±0.23 1.528±1.10
ENST00000356327 1.005±0.00 N/A N/A 0.671±0.31 3.601±0.00 0.893±0.00 N/A N/A N/A N/A N/A 1.954±1.25 1.147±0.31 0.911±0.00
ENST00000418087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.101±0.00 N/A N/A N/A
ENST00000446289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460926 N/A N/A N/A 2.974±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.492±0.00 N/A N/A N/A
ENST00000467432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000154310 ENST00000284483 N/A N/A N/A 2.771±0.00 N/A N/A N/A N/A N/A N/A 0.935±0.00 N/A N/A N/A
ENST00000341852 N/A N/A 0.377±0.00 N/A N/A 0.795±0.00 N/A N/A N/A N/A 1.629±0.00 0.254±0.06 N/A N/A
ENST00000357327 N/A N/A 0.625±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.624±0.00 N/A
ENST00000436636 0.238±0.00 1.148±0.00 N/A 7.614±0.77 1.150±0.62 2.273±0.02 1.470±0.28 2.193±0.00 1.810±0.32 2.037±0.52 1.587±0.11 0.320±0.18 0.528±0.05 4.960±0.55
ENST00000459881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468757 N/A N/A 2.205±0.00 N/A N/A N/A N/A N/A 2.896±0.00 N/A N/A N/A N/A N/A
ENST00000470834 0.111±0.00 N/A N/A N/A 0.860±0.00 N/A N/A N/A N/A 1.009±0.00 N/A 0.281±0.01 0.251±0.00 N/A
ENST00000475336 N/A N/A 0.704±0.00 N/A N/A N/A N/A 1.261±0.00 N/A N/A N/A N/A 0.230±0.00 3.188±0.00
ENST00000484051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496492 N/A N/A N/A N/A 1.403±0.00 2.187±0.00 0.991±0.00 N/A 1.520±0.00 2.738±0.00 N/A N/A N/A 2.926±0.00
ENSG00000163581 ENST00000314251 N/A N/A 1.033±0.00 N/A 0.363±0.00 N/A N/A 76.715±73.00 19.928±19.81 N/A N/A N/A 0.014±0.00 0.023±0.01
ENST00000461867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.00
ENST00000469787 N/A N/A 2.591±0.00 N/A N/A N/A N/A 77.446±0.00 N/A 0.294±0.00 N/A 0.020±0.00 N/A 0.015±0.00
ENST00000471379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497642 N/A N/A 1.533±0.00 N/A 0.103±0.00 N/A 0.063±0.00 N/A N/A 0.003±0.00 0.096±0.00 N/A N/A N/A
ENSG00000222506 ENST00000410574 N/A N/A N/A N/A N/A N/A 0.305±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000234594 ENST00000420943 N/A N/A N/A 0.357±0.00 0.243±0.00 0.152±0.00 1.572±0.00 N/A 0.357±0.00 0.339±0.00 0.528±0.00 N/A N/A N/A
ENSG00000240497 ENST00000467896 N/A N/A N/A 0.132±0.00 N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 0.100±0.00 0.106±0.01
ENSG00000279673 ENST00000623631 N/A 0.554±0.00 N/A 0.381±0.07 0.160±0.04 0.168±0.00 0.118±0.00 0.124±0.10 0.246±0.02 0.085±0.00 0.111±0.00 0.171±0.06 0.205±0.14 0.241±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027690 ENSMUST00000029240 0.140±0.08 N/A N/A 0.064±0.00 0.117±0.04 0.059±0.00 0.055±0.00 45.369±9.08 45.011±28.37 0.036±0.00 N/A 0.217±0.09 6.592±7.53 0.062±0.03
ENSMUST00000163536 0.136±0.00 0.064±0.03 0.027±0.00 0.041±0.01 0.213±0.19 0.050±0.00 0.037±0.01 11.278±0.00 27.755±7.00 0.080±0.00 N/A 0.218±0.09 0.378±0.11 0.079±0.02
ENSMUST00000169047 N/A 0.082±0.00 0.032±0.01 0.008±0.00 0.041±0.00 0.067±0.00 0.062±0.01 N/A N/A 0.056±0.01 0.034±0.00 0.337±0.12 0.293±0.00 0.045±0.00
ENSMUSG00000027692 ENSMUST00000159236 0.184±0.08 0.256±0.05 1.126±0.63 1.072±0.00 0.692±0.21 0.325±0.09 1.169±0.00 0.053±0.03 0.067±0.05 0.614±0.31 0.659±0.00 0.257±0.07 0.083±0.02 0.354±0.00
ENSMUST00000159308 N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A
ENSMUST00000159680 0.506±0.38 0.413±0.08 N/A N/A 1.167±0.06 0.575±0.18 1.090±0.33 N/A N/A 1.903±0.77 1.653±0.81 0.842±0.47 0.200±0.00 0.986±0.34
ENSMUST00000159733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160307 N/A 1.241±0.00 N/A 6.924±4.12 N/A 0.782±0.00 0.959±0.30 0.109±0.00 0.121±0.04 N/A N/A 0.799±0.17 N/A N/A
ENSMUST00000160518 N/A 0.943±0.24 N/A N/A N/A 0.938±0.17 N/A 0.140±0.03 0.160±0.07 0.789±0.02 N/A 0.974±0.52 N/A N/A
ENSMUST00000160934 0.647±0.36 0.537±0.08 2.799±0.62 10.376±3.48 0.365±0.00 0.613±0.12 0.494±0.09 0.105±0.03 0.340±0.19 0.636±0.17 1.340±0.43 1.133±1.07 0.605±0.19 1.324±0.34
ENSMUST00000161214 N/A N/A N/A N/A N/A N/A N/A 0.181±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000161234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.616±0.00 1.150±0.44 12.816±0.00
ENSMUST00000161964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.363±0.00 N/A N/A
ENSMUST00000162037 N/A N/A N/A N/A N/A 0.878±0.42 N/A 0.111±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000162225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162485 N/A N/A N/A 31.433±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.056±0.00
ENSMUST00000162777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.213±0.00
ENSMUSG00000027695 ENSMUST00000067757 1.256±0.76 0.153±0.01 4.143±0.05 0.651±0.25 1.233±0.96 2.979±1.24 0.683±0.07 1.076±0.49 0.690±0.32 0.706±0.00 0.306±0.15 1.728±1.58 1.584±0.93 0.216±0.06
ENSMUST00000120834 2.443±1.07 0.170±0.14 1.530±0.55 0.276±0.03 0.821±0.29 3.498±1.85 0.866±0.18 1.109±0.46 1.180±0.47 2.545±1.17 0.230±0.04 1.192±0.47 1.761±0.68 N/A
ENSMUST00000123539 N/A N/A N/A 0.239±0.00 0.406±0.13 1.455±0.08 0.344±0.00 0.576±0.16 0.151±0.00 1.369±0.00 0.212±0.00 1.116±0.26 0.727±0.00 0.067±0.00
ENSMUST00000125338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.252±0.14
ENSMUST00000148827 0.857±0.00 0.438±0.16 0.908±0.00 0.388±0.00 0.596±0.25 2.675±1.09 0.244±0.00 0.740±0.22 0.623±0.36 1.540±0.17 0.502±0.11 1.498±0.74 0.624±0.00 0.173±0.07
ENSMUST00000149017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000091329 ENSMUST00000167704 0.261±0.09 0.512±0.00 0.125±0.01 0.246±0.00 0.266±0.11 N/A N/A 0.498±0.31 0.457±0.24 N/A 0.071±0.02 0.932±0.63 0.220±0.12 5.453±4.58

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