C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007TL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2297 VISTA 9606 6:84971170-85574346
GeneTranscriptPositionBiotype
ENSG00000135317 (SNX14)
sorting nexin 14 		ENST00000314673 (SNX14-002) 85505499-85593895 protein_coding
ENST00000346348 (SNX14-001) 85505496-85593913 protein_coding
ENST00000369627 (SNX14-008) 85505802-85593850 protein_coding
ENST00000369635 (SNX14-005) 85513857-85593785 nonsense_mediated_decay
ENST00000418862 (SNX14-004) 85508007-85528351 protein_coding
ENST00000474645 (SNX14-003) 85505798-85508457 retained_intron
ENST00000503491 (SNX14-012) 85505806-85568483 retained_intron
ENST00000503608 (SNX14-019) 85517569-85533680 retained_intron
ENST00000504191 (SNX14-016) 85547402-85549758 retained_intron
ENST00000505648 (SNX14-009) 85505798-85594156 protein_coding
ENST00000506182 (SNX14-017) 85528264-85543787 retained_intron
ENST00000508658 (SNX14-020) 85507208-85514613 protein_coding
ENST00000508980 (SNX14-006) 85505799-85581846 processed_transcript
ENST00000509338 (SNX14-013) 85549789-85593885 protein_coding
ENST00000513865 (SNX14-007) 85505793-85593805 protein_coding
ENST00000513869 (SNX14-014) 85549824-85593857 nonsense_mediated_decay
ENST00000514419 (SNX14-015) 85549801-85593871 protein_coding
ENST00000514801 (SNX14-018) 85533675-85537024 retained_intron
ENST00000515216 (SNX14-011) 85507968-85589693 protein_coding
ENSG00000135318 (NT5E)
5'-nucleotidase, ecto (CD73) 		ENST00000257770 (NT5E-001) 85450091-85495778 protein_coding
ENST00000369646 (NT5E-002) 85450091-85471599 protein_coding
ENST00000369651 (NT5E-201) 85449584-85495791 protein_coding
ENST00000416334 (NT5E-003) 85471381-85492161 protein_coding
ENST00000437581 (NT5E-004) 85485397-85491325 protein_coding
ENSG00000213211 (KRT18P64)
keratin 18 pseudogene 64 		ENST00000434946 (KRT18P64-001) 85287789-85289007 processed_pseudogene
ENSG00000214460 (TPT1P6)
tumor protein, translationally-controlled 1 pseudogene 6 		ENST00000458298 (TPT1P6-001) 85427453-85427966 processed_pseudogene
ENSG00000216902 (RP1-161C16.1)
 ENST00000403365 (RP1-161C16.1-001) 85257328-85257694 processed_pseudogene
ENSG00000217060 (RP11-30P6.1)
 ENST00000402742 (RP11-30P6.1-001) 85286076-85290849 unprocessed_pseudogene
ENSG00000234155 (RP11-30P6.6)
 ENST00000455071 (RP11-30P6.6-001) 85387219-85390186 lincRNA
ENSG00000280232 (RP11-321N4.4)
 ENST00000624603 (RP11-321N4.4-001) 85498441-85499058 TEC

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0007TL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2297 VISTA 10090 9:87895357-88499255
GeneTranscriptPositionBiotype
ENSMUSG00000032420 (Nt5e)
5' nucleotidase, ecto 		ENSMUST00000034992 (Nt5e-001) 88327197-88372092 protein_coding
ENSMUST00000186789 (Nt5e-003) 88327618-88331219 retained_intron
ENSMUST00000187166 (Nt5e-002) 88327633-88367844 retained_intron
ENSMUSG00000032422 (Snx14)
sorting nexin 14 		ENSMUST00000126405 (Snx14-003) 88381539-88438929 nonsense_mediated_decay
ENSMUST00000126563 (Snx14-004) 88419698-88438912 retained_intron
ENSMUST00000140439 (Snx14-002) 88376752-88398621 retained_intron
ENSMUST00000165315 (Snx14-001) 88376750-88438951 protein_coding
ENSMUST00000173011 (Snx14-007) 88376752-88438898 protein_coding
ENSMUST00000173039 (Snx14-005) 88376764-88438958 protein_coding
ENSMUST00000174806 (Snx14-006) 88376767-88438914 protein_coding
ENSMUST00000187610 (Snx14-008) 88392206-88394474 retained_intron
ENSMUSG00000032423 (Syncrip)
synaptotagmin binding, cytoplasmic RNA interacting protein 		ENSMUST00000069221 (Syncrip-001) 88449739-88482559 protein_coding
ENSMUST00000172508 (Syncrip-009) 88479662-88482574 protein_coding
ENSMUST00000172828 (Syncrip-005) 88453938-88482149 nonsense_mediated_decay
ENSMUST00000173405 (Syncrip-010) 88476866-88481169 protein_coding
ENSMUST00000173801 (Syncrip-002) 88455578-88482555 protein_coding
ENSMUST00000174145 (Syncrip-011) 88464601-88480744 retained_intron
ENSMUST00000174269 (Syncrip-006) 88452640-88482131 protein_coding
ENSMUST00000174282 (Syncrip-003) 88452689-88482196 protein_coding
ENSMUST00000174361 (Syncrip-008) 88456138-88480753 protein_coding
ENSMUST00000174391 (Syncrip-004) 88449731-88482248 protein_coding
ENSMUST00000174688 (Syncrip-007) 88452437-88480765 protein_coding
ENSMUST00000187770 (Syncrip-012) 88478723-88481224 retained_intron
ENSMUSG00000099886 (RP23-338I1.3)
predicted gene 2324 		ENSMUST00000187464 (RP23-338I1.3-001) 88121295-88122765 processed_pseudogene
ENSMUSG00000100337 (RP23-118M23.7)
predicted gene 5066 		ENSMUST00000188479 (RP23-118M23.7-001) 88280369-88281190 processed_pseudogene
ENSMUSG00000100782 (RP23-118M23.4)
predicted gene 28231 		ENSMUST00000190118 (RP23-118M23.4-001) 88259895-88263035 lincRNA
ENSMUSG00000101335 (RP24-286H7.4)
predicted gene 28229 		ENSMUST00000188747 (RP24-286H7.4-001) 88441500-88443652 sense_intronic
ENSMUSG00000102075 (RP23-338I1.1)
predicted gene 5368 		ENSMUST00000189012 (RP23-338I1.1-001) 88145969-88146554 processed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007TL_0001ENSG00000135317ENST00000314673ENST00000346348ENST00000369627ENST00000369635ENST00000418862ENST00000474645ENST00000503491ENST00000503608ENST00000504191ENST00000505648ENST00000506182ENST00000508658ENST00000508980ENST00000509338ENST00000513865ENST00000513869ENST00000514419ENST00000514801ENST00000515216ENSG00000135318ENST00000257770ENST00000369646ENST00000369651ENST00000416334ENST00000437581ENSG00000213211ENST00000434946ENSG00000214460ENST00000458298ENSG00000216902ENST00000403365ENSG00000217060ENST00000402742ENSG00000234155ENST00000455071ENSG00000280232ENST00000624603CIL_0007TL_0002ENSMUSG00000032420ENSMUST00000034992ENSMUST00000186789ENSMUST00000187166ENSMUSG00000032422ENSMUST00000126405ENSMUST00000126563ENSMUST00000140439ENSMUST00000165315ENSMUST00000173011ENSMUST00000173039ENSMUST00000174806ENSMUST00000187610ENSMUSG00000032423ENSMUST00000069221ENSMUST00000172508ENSMUST00000172828ENSMUST00000173405ENSMUST00000173801ENSMUST00000174145ENSMUST00000174269ENSMUST00000174282ENSMUST00000174361ENSMUST00000174391ENSMUST00000174688ENSMUST00000187770ENSMUSG00000099886ENSMUST00000187464ENSMUSG00000100337ENSMUST00000188479ENSMUSG00000100782ENSMUST00000190118ENSMUSG00000101335ENSMUST00000188747ENSMUSG00000102075ENSMUST00000189012
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007TL_0001ENSG00000135317ENST00000314673ENST00000369627ENST00000369635ENST00000505648ENSG00000135318ENST00000257770ENST00000369646ENST00000369651ENST00000416334ENSG00000213211ENST00000434946ENSG00000214460ENST00000458298ENSG00000216902ENST00000403365ENSG00000217060ENST00000402742ENSG00000234155ENST00000455071ENSG00000280232ENST00000624603CIL_0007TL_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135317 ENST00000314673 N/A N/A N/A 6.029±0.62 N/A N/A 1.388±0.00 N/A N/A N/A N/A 9.773±0.00 N/A N/A
ENST00000346348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000369627 N/A N/A 3.293±0.00 N/A N/A N/A N/A 5.719±0.00 N/A N/A N/A 6.378±0.00 N/A 12.008±0.00
ENST00000369635 N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.239±0.00 N/A N/A N/A N/A
ENST00000418862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505648 N/A N/A N/A 5.743±0.00 N/A N/A 1.788±0.00 N/A N/A N/A 1.002±0.00 N/A N/A 15.811±0.00
ENST00000506182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135318 ENST00000257770 9.870±0.00 9.598±0.00 0.897±0.00 2.445±0.12 5.257±0.66 6.907±3.45 1.151±0.74 6.071±2.28 6.442±0.89 1.856±0.73 0.659±0.23 7.980±5.61 14.792±5.45 5.535±1.35
ENST00000369646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.245±0.00 N/A N/A N/A
ENST00000369651 N/A N/A N/A N/A N/A 1.057±0.40 N/A N/A N/A 0.870±0.29 N/A N/A N/A 1.001±0.00
ENST00000416334 N/A N/A N/A N/A N/A N/A 0.730±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000437581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213211 ENST00000434946 N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A 0.017±0.00 N/A 0.073±0.06
ENSG00000214460 ENST00000458298 0.572±0.00 0.995±0.00 N/A 0.209±0.00 0.464±0.00 0.781±0.00 0.207±0.00 0.519±0.00 0.111±0.00 0.260±0.00 1.375±0.00 0.550±0.04 0.473±0.00 0.464±0.18
ENSG00000216902 ENST00000403365 N/A 0.076±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000217060 ENST00000402742 N/A N/A N/A 0.014±0.00 0.007±0.00 N/A N/A N/A N/A N/A 0.006±0.00 0.016±0.00 N/A 0.025±0.01
ENSG00000234155 ENST00000455071 N/A 0.013±0.00 0.851±0.00 0.017±0.00 0.059±0.06 0.716±0.41 0.064±0.00 2.279±1.89 0.822±0.00 N/A N/A 0.037±0.01 N/A 0.029±0.01
ENSG00000280232 ENST00000624603 0.066±0.00 0.410±0.00 N/A 0.117±0.00 0.065±0.00 N/A 0.061±0.00 0.591±0.00 0.055±0.00 0.090±0.00 0.113±0.00 0.568±0.00 N/A 0.121±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032420 ENSMUST00000034992 1.153±0.75 1.301±0.55 17.068±2.11 0.749±0.18 2.911±0.47 12.141±3.84 3.581±0.60 10.411±2.02 11.110±5.23 16.769±0.59 0.475±0.10 1.632±0.53 12.625±7.78 2.510±0.84
ENSMUST00000186789 N/A 1.225±1.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187166 N/A 0.773±0.00 N/A N/A 0.878±0.09 6.639±2.41 0.584±0.00 N/A N/A N/A N/A 0.802±0.32 N/A N/A
ENSMUSG00000032422 ENSMUST00000126405 2.071±0.00 9.186±1.59 N/A N/A 2.211±0.00 3.367±0.00 3.202±0.40 N/A 1.823±0.09 6.354±0.00 N/A N/A N/A N/A
ENSMUST00000126563 N/A 53.641±11.69 N/A N/A 12.545±3.86 17.138±5.47 N/A 6.527±0.00 6.908±1.77 18.762±2.90 N/A 17.431±3.62 N/A N/A
ENSMUST00000140439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165315 4.312±1.51 N/A 16.537±0.86 N/A 3.167±0.36 5.175±0.00 3.791±0.90 4.667±1.35 6.151±2.30 7.453±1.94 N/A 9.893±5.25 12.758±2.25 8.320±1.45
ENSMUST00000173011 N/A N/A N/A N/A 3.487±0.16 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173039 N/A 8.337±2.50 N/A N/A 3.380±0.06 6.706±2.24 N/A 5.776±1.30 3.440±1.42 3.839±0.38 N/A 3.115±0.72 N/A 3.113±0.00
ENSMUST00000174806 N/A N/A N/A 9.361±0.00 N/A N/A 2.955±0.00 N/A N/A N/A 3.656±0.54 N/A N/A N/A
ENSMUST00000187610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032423 ENSMUST00000069221 2.546±1.00 N/A 7.673±1.18 7.942±1.37 1.756±0.84 N/A 1.533±0.29 2.436±0.10 2.928±1.49 3.478±0.78 3.490±1.57 1.906±0.00 4.218±0.34 N/A
ENSMUST00000172508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172828 N/A N/A N/A 31.428±0.00 N/A N/A N/A N/A N/A N/A 5.518±0.80 36.811±24.67 49.299±33.35 68.909±0.00
ENSMUST00000173405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173801 N/A 6.057±0.00 N/A 11.475±0.00 4.197±0.00 4.709±0.00 2.501±0.15 5.100±0.00 4.923±3.37 N/A N/A 2.916±1.11 10.651±0.22 5.147±1.46
ENSMUST00000174145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174282 N/A N/A N/A 9.522±0.00 N/A N/A 2.131±0.00 N/A 5.801±2.69 N/A 3.301±0.61 10.683±1.49 10.784±3.48 N/A
ENSMUST00000174361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174391 N/A N/A N/A 5.231±0.45 N/A N/A N/A N/A N/A N/A 3.146±1.61 5.520±2.48 2.836±0.00 N/A
ENSMUST00000174688 N/A N/A N/A N/A N/A N/A N/A N/A 4.937±0.63 N/A N/A N/A N/A N/A
ENSMUST00000187770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000099886 ENSMUST00000187464 N/A N/A N/A 0.030±0.00 N/A N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100337 ENSMUST00000188479 0.105±0.02 N/A 0.023±0.00 N/A N/A 0.243±0.09 0.132±0.02 0.084±0.00 0.044±0.00 0.096±0.00 N/A N/A 0.050±0.00 0.164±0.05
ENSMUSG00000100782 ENSMUST00000190118 0.016±0.00 N/A N/A N/A N/A 0.048±0.02 0.172±0.05 0.014±0.00 N/A 0.082±0.02 N/A 0.094±0.04 0.012±0.01 0.015±0.00
ENSMUSG00000101335 ENSMUST00000188747 0.410±0.19 0.519±0.28 1.316±0.31 0.952±0.77 0.514±0.14 0.461±0.11 0.173±0.01 0.286±0.12 0.907±0.55 0.335±0.11 0.830±0.17 0.497±0.36 0.491±0.32 0.426±0.18
ENSMUSG00000102075 ENSMUST00000189012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A

Loading