C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007TL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2297 VISTA 9606 6:84971170-85574346
GeneTranscriptPositionBiotype
ENSG00000135317 (SNX14)
sorting nexin 14 		ENST00000314673 (SNX14-002) 85505499-85593895 protein_coding
ENST00000346348 (SNX14-001) 85505496-85593913 protein_coding
ENST00000369627 (SNX14-008) 85505802-85593850 protein_coding
ENST00000369635 (SNX14-005) 85513857-85593785 nonsense_mediated_decay
ENST00000418862 (SNX14-004) 85508007-85528351 protein_coding
ENST00000474645 (SNX14-003) 85505798-85508457 retained_intron
ENST00000503491 (SNX14-012) 85505806-85568483 retained_intron
ENST00000503608 (SNX14-019) 85517569-85533680 retained_intron
ENST00000504191 (SNX14-016) 85547402-85549758 retained_intron
ENST00000505648 (SNX14-009) 85505798-85594156 protein_coding
ENST00000506182 (SNX14-017) 85528264-85543787 retained_intron
ENST00000508658 (SNX14-020) 85507208-85514613 protein_coding
ENST00000508980 (SNX14-006) 85505799-85581846 processed_transcript
ENST00000509338 (SNX14-013) 85549789-85593885 protein_coding
ENST00000513865 (SNX14-007) 85505793-85593805 protein_coding
ENST00000513869 (SNX14-014) 85549824-85593857 nonsense_mediated_decay
ENST00000514419 (SNX14-015) 85549801-85593871 protein_coding
ENST00000514801 (SNX14-018) 85533675-85537024 retained_intron
ENST00000515216 (SNX14-011) 85507968-85589693 protein_coding
ENSG00000135318 (NT5E)
5'-nucleotidase, ecto (CD73) 		ENST00000257770 (NT5E-001) 85450091-85495778 protein_coding
ENST00000369646 (NT5E-002) 85450091-85471599 protein_coding
ENST00000369651 (NT5E-201) 85449584-85495791 protein_coding
ENST00000416334 (NT5E-003) 85471381-85492161 protein_coding
ENST00000437581 (NT5E-004) 85485397-85491325 protein_coding
ENSG00000213211 (KRT18P64)
keratin 18 pseudogene 64 		ENST00000434946 (KRT18P64-001) 85287789-85289007 processed_pseudogene
ENSG00000214460 (TPT1P6)
tumor protein, translationally-controlled 1 pseudogene 6 		ENST00000458298 (TPT1P6-001) 85427453-85427966 processed_pseudogene
ENSG00000216902 (RP1-161C16.1)
 ENST00000403365 (RP1-161C16.1-001) 85257328-85257694 processed_pseudogene
ENSG00000217060 (RP11-30P6.1)
 ENST00000402742 (RP11-30P6.1-001) 85286076-85290849 unprocessed_pseudogene
ENSG00000234155 (RP11-30P6.6)
 ENST00000455071 (RP11-30P6.6-001) 85387219-85390186 lincRNA
ENSG00000280232 (RP11-321N4.4)
 ENST00000624603 (RP11-321N4.4-001) 85498441-85499058 TEC
CIL_0007TL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2297 VISTA 10090 9:87895357-88499255
GeneTranscriptPositionBiotype
ENSMUSG00000032420 (Nt5e)
5' nucleotidase, ecto 		ENSMUST00000034992 (Nt5e-001) 88327197-88372092 protein_coding
ENSMUST00000186789 (Nt5e-003) 88327618-88331219 retained_intron
ENSMUST00000187166 (Nt5e-002) 88327633-88367844 retained_intron
ENSMUSG00000032422 (Snx14)
sorting nexin 14 		ENSMUST00000126405 (Snx14-003) 88381539-88438929 nonsense_mediated_decay
ENSMUST00000126563 (Snx14-004) 88419698-88438912 retained_intron
ENSMUST00000140439 (Snx14-002) 88376752-88398621 retained_intron
ENSMUST00000165315 (Snx14-001) 88376750-88438951 protein_coding
ENSMUST00000173011 (Snx14-007) 88376752-88438898 protein_coding
ENSMUST00000173039 (Snx14-005) 88376764-88438958 protein_coding
ENSMUST00000174806 (Snx14-006) 88376767-88438914 protein_coding
ENSMUST00000187610 (Snx14-008) 88392206-88394474 retained_intron
ENSMUSG00000032423 (Syncrip)
synaptotagmin binding, cytoplasmic RNA interacting protein 		ENSMUST00000069221 (Syncrip-001) 88449739-88482559 protein_coding
ENSMUST00000172508 (Syncrip-009) 88479662-88482574 protein_coding
ENSMUST00000172828 (Syncrip-005) 88453938-88482149 nonsense_mediated_decay
ENSMUST00000173405 (Syncrip-010) 88476866-88481169 protein_coding
ENSMUST00000173801 (Syncrip-002) 88455578-88482555 protein_coding
ENSMUST00000174145 (Syncrip-011) 88464601-88480744 retained_intron
ENSMUST00000174269 (Syncrip-006) 88452640-88482131 protein_coding
ENSMUST00000174282 (Syncrip-003) 88452689-88482196 protein_coding
ENSMUST00000174361 (Syncrip-008) 88456138-88480753 protein_coding
ENSMUST00000174391 (Syncrip-004) 88449731-88482248 protein_coding
ENSMUST00000174688 (Syncrip-007) 88452437-88480765 protein_coding
ENSMUST00000187770 (Syncrip-012) 88478723-88481224 retained_intron
ENSMUSG00000099886 (RP23-338I1.3)
predicted gene 2324 		ENSMUST00000187464 (RP23-338I1.3-001) 88121295-88122765 processed_pseudogene
ENSMUSG00000100337 (RP23-118M23.7)
predicted gene 5066 		ENSMUST00000188479 (RP23-118M23.7-001) 88280369-88281190 processed_pseudogene
ENSMUSG00000100782 (RP23-118M23.4)
predicted gene 28231 		ENSMUST00000190118 (RP23-118M23.4-001) 88259895-88263035 lincRNA
ENSMUSG00000101335 (RP24-286H7.4)
predicted gene 28229 		ENSMUST00000188747 (RP24-286H7.4-001) 88441500-88443652 sense_intronic
ENSMUSG00000102075 (RP23-338I1.1)
predicted gene 5368 		ENSMUST00000189012 (RP23-338I1.1-001) 88145969-88146554 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007TL_0001ENSG00000135317ENST00000314673ENST00000346348ENST00000369627ENST00000369635ENST00000418862ENST00000474645ENST00000503491ENST00000503608ENST00000504191ENST00000505648ENST00000506182ENST00000508658ENST00000508980ENST00000509338ENST00000513865ENST00000513869ENST00000514419ENST00000514801ENST00000515216ENSG00000135318ENST00000257770ENST00000369646ENST00000369651ENST00000416334ENST00000437581ENSG00000213211ENST00000434946ENSG00000214460ENST00000458298ENSG00000216902ENST00000403365ENSG00000217060ENST00000402742ENSG00000234155ENST00000455071ENSG00000280232ENST00000624603CIL_0007TL_0002ENSMUSG00000032420ENSMUST00000034992ENSMUST00000186789ENSMUST00000187166ENSMUSG00000032422ENSMUST00000126405ENSMUST00000126563ENSMUST00000140439ENSMUST00000165315ENSMUST00000173011ENSMUST00000173039ENSMUST00000174806ENSMUST00000187610ENSMUSG00000032423ENSMUST00000069221ENSMUST00000172508ENSMUST00000172828ENSMUST00000173405ENSMUST00000173801ENSMUST00000174145ENSMUST00000174269ENSMUST00000174282ENSMUST00000174361ENSMUST00000174391ENSMUST00000174688ENSMUST00000187770ENSMUSG00000099886ENSMUST00000187464ENSMUSG00000100337ENSMUST00000188479ENSMUSG00000100782ENSMUST00000190118ENSMUSG00000101335ENSMUST00000188747ENSMUSG00000102075ENSMUST00000189012
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007TL_0001ENSG00000135317ENST00000314673ENST00000369627ENST00000369635ENST00000505648ENSG00000135318ENST00000257770ENST00000369646ENST00000369651ENST00000416334ENSG00000213211ENST00000434946ENSG00000214460ENST00000458298ENSG00000216902ENST00000403365ENSG00000217060ENST00000402742ENSG00000234155ENST00000455071ENSG00000280232ENST00000624603CIL_0007TL_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135317 ENST00000314673 N/A N/A N/A 6.029±0.62 N/A N/A 1.388±0.00 N/A N/A N/A N/A 9.773±0.00 N/A N/A
ENST00000346348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000369627 N/A N/A 3.293±0.00 N/A N/A N/A N/A 5.719±0.00 N/A N/A N/A 6.378±0.00 N/A 12.008±0.00
ENST00000369635 N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.239±0.00 N/A N/A N/A N/A
ENST00000418862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505648 N/A N/A N/A 5.743±0.00 N/A N/A 1.788±0.00 N/A N/A N/A 1.002±0.00 N/A N/A 15.811±0.00
ENST00000506182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135318 ENST00000257770 9.870±0.00 9.598±0.00 0.897±0.00 2.445±0.12 5.257±0.66 6.907±3.45 1.151±0.74 6.071±2.28 6.442±0.89 1.856±0.73 0.659±0.23 7.980±5.61 14.792±5.45 5.535±1.35
ENST00000369646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.245±0.00 N/A N/A N/A
ENST00000369651 N/A N/A N/A N/A N/A 1.057±0.40 N/A N/A N/A 0.870±0.29 N/A N/A N/A 1.001±0.00
ENST00000416334 N/A N/A N/A N/A N/A N/A 0.730±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000437581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213211 ENST00000434946 N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A 0.017±0.00 N/A 0.073±0.06
ENSG00000214460 ENST00000458298 0.572±0.00 0.995±0.00 N/A 0.209±0.00 0.464±0.00 0.781±0.00 0.207±0.00 0.519±0.00 0.111±0.00 0.260±0.00 1.375±0.00 0.550±0.04 0.473±0.00 0.464±0.18
ENSG00000216902 ENST00000403365 N/A 0.076±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000217060 ENST00000402742 N/A N/A N/A 0.014±0.00 0.007±0.00 N/A N/A N/A N/A N/A 0.006±0.00 0.016±0.00 N/A 0.025±0.01
ENSG00000234155 ENST00000455071 N/A 0.013±0.00 0.851±0.00 0.017±0.00 0.059±0.06 0.716±0.41 0.064±0.00 2.279±1.89 0.822±0.00 N/A N/A 0.037±0.01 N/A 0.029±0.01
ENSG00000280232 ENST00000624603 0.066±0.00 0.410±0.00 N/A 0.117±0.00 0.065±0.00 N/A 0.061±0.00 0.591±0.00 0.055±0.00 0.090±0.00 0.113±0.00 0.568±0.00 N/A 0.121±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032420 ENSMUST00000034992 1.153±0.75 1.301±0.55 17.068±2.11 0.749±0.18 2.911±0.47 12.141±3.84 3.581±0.60 10.411±2.02 11.110±5.23 16.769±0.59 0.475±0.10 1.632±0.53 12.625±7.78 2.510±0.84
ENSMUST00000186789 N/A 1.225±1.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187166 N/A 0.773±0.00 N/A N/A 0.878±0.09 6.639±2.41 0.584±0.00 N/A N/A N/A N/A 0.802±0.32 N/A N/A
ENSMUSG00000032422 ENSMUST00000126405 2.071±0.00 9.186±1.59 N/A N/A 2.211±0.00 3.367±0.00 3.202±0.40 N/A 1.823±0.09 6.354±0.00 N/A N/A N/A N/A
ENSMUST00000126563 N/A 53.641±11.69 N/A N/A 12.545±3.86 17.138±5.47 N/A 6.527±0.00 6.908±1.77 18.762±2.90 N/A 17.431±3.62 N/A N/A
ENSMUST00000140439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165315 4.312±1.51 N/A 16.537±0.86 N/A 3.167±0.36 5.175±0.00 3.791±0.90 4.667±1.35 6.151±2.30 7.453±1.94 N/A 9.893±5.25 12.758±2.25 8.320±1.45
ENSMUST00000173011 N/A N/A N/A N/A 3.487±0.16 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173039 N/A 8.337±2.50 N/A N/A 3.380±0.06 6.706±2.24 N/A 5.776±1.30 3.440±1.42 3.839±0.38 N/A 3.115±0.72 N/A 3.113±0.00
ENSMUST00000174806 N/A N/A N/A 9.361±0.00 N/A N/A 2.955±0.00 N/A N/A N/A 3.656±0.54 N/A N/A N/A
ENSMUST00000187610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032423 ENSMUST00000069221 2.546±1.00 N/A 7.673±1.18 7.942±1.37 1.756±0.84 N/A 1.533±0.29 2.436±0.10 2.928±1.49 3.478±0.78 3.490±1.57 1.906±0.00 4.218±0.34 N/A
ENSMUST00000172508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172828 N/A N/A N/A 31.428±0.00 N/A N/A N/A N/A N/A N/A 5.518±0.80 36.811±24.67 49.299±33.35 68.909±0.00
ENSMUST00000173405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173801 N/A 6.057±0.00 N/A 11.475±0.00 4.197±0.00 4.709±0.00 2.501±0.15 5.100±0.00 4.923±3.37 N/A N/A 2.916±1.11 10.651±0.22 5.147±1.46
ENSMUST00000174145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174282 N/A N/A N/A 9.522±0.00 N/A N/A 2.131±0.00 N/A 5.801±2.69 N/A 3.301±0.61 10.683±1.49 10.784±3.48 N/A
ENSMUST00000174361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174391 N/A N/A N/A 5.231±0.45 N/A N/A N/A N/A N/A N/A 3.146±1.61 5.520±2.48 2.836±0.00 N/A
ENSMUST00000174688 N/A N/A N/A N/A N/A N/A N/A N/A 4.937±0.63 N/A N/A N/A N/A N/A
ENSMUST00000187770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000099886 ENSMUST00000187464 N/A N/A N/A 0.030±0.00 N/A N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100337 ENSMUST00000188479 0.105±0.02 N/A 0.023±0.00 N/A N/A 0.243±0.09 0.132±0.02 0.084±0.00 0.044±0.00 0.096±0.00 N/A N/A 0.050±0.00 0.164±0.05
ENSMUSG00000100782 ENSMUST00000190118 0.016±0.00 N/A N/A N/A N/A 0.048±0.02 0.172±0.05 0.014±0.00 N/A 0.082±0.02 N/A 0.094±0.04 0.012±0.01 0.015±0.00
ENSMUSG00000101335 ENSMUST00000188747 0.410±0.19 0.519±0.28 1.316±0.31 0.952±0.77 0.514±0.14 0.461±0.11 0.173±0.01 0.286±0.12 0.907±0.55 0.335±0.11 0.830±0.17 0.497±0.36 0.491±0.32 0.426±0.18
ENSMUSG00000102075 ENSMUST00000189012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A

Loading