C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007UK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs233 VISTA 9606 12:23838078-24439790
GeneTranscriptPositionBiotype
ENSG00000134532 (SOX5)
SRY (sex determining region Y)-box 5 		ENST00000367206 (SOX5-006) 23536530-23950920 nonsense_mediated_decay
ENST00000381381 (SOX5-201) 23532298-23949703 protein_coding
ENST00000396007 (SOX5-001) 23534034-23584612 protein_coding
ENST00000441133 (SOX5-004) 23762475-23951020 protein_coding
ENST00000451604 (SOX5-002) 23532352-23949703 protein_coding
ENST00000535530 (SOX5-014) 23563316-23738506 processed_transcript
ENST00000536629 (SOX5-015) 23575813-23738506 processed_transcript
ENST00000536850 (SOX5-011) 23920038-23949592 processed_transcript
ENST00000536911 (SOX5-013) 23603921-23734715 retained_intron
ENST00000537393 (SOX5-008) 23533683-23949647 protein_coding
ENST00000538083 (SOX5-010) 23845991-23944352 protein_coding
ENST00000541536 (SOX5-009) 23533787-23896027 protein_coding
ENST00000541847 (SOX5-016) 23740851-23950907 protein_coding
ENST00000542241 (SOX5-012) 23575659-23632194 processed_transcript
ENST00000545921 (SOX5-007) 23534048-23951032 protein_coding
ENST00000546136 (SOX5-003) 23529500-23896026 protein_coding
ENSG00000255864 (RP11-444D3.1)
 ENST00000429944 (RP11-444D3.1-003) 24277250-24562493 lincRNA
ENST00000446891 (RP11-444D3.1-006) 24213342-24562487 lincRNA
ENST00000456299 (RP11-444D3.1-002) 24331286-24562544 lincRNA
ENST00000536729 (RP11-444D3.1-005) 24213343-24357430 lincRNA
ENST00000538905 (RP11-444D3.1-004) 24367935-24562382 lincRNA
ENST00000540811 (RP11-444D3.1-001) 24213256-24562590 lincRNA
ENSG00000256120 (RP11-778H2.1)
 ENST00000539583 (RP11-778H2.1-002) 24223287-24237965 lincRNA
ENST00000540733 (RP11-778H2.1-001) 24223271-24227508 lincRNA
CIL_0007UK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs233 VISTA 10090 6:144066812-144668484
GeneTranscriptPositionBiotype
ENSMUSG00000087157 (Sox5os2)
SRY (sex determining region Y)-box 5, opposite strand 2 		ENSMUST00000156443 (Sox5os2-001) 144481225-144501416 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007UK_0001ENSG00000134532ENST00000367206ENST00000381381ENST00000396007ENST00000441133ENST00000451604ENST00000535530ENST00000536629ENST00000536850ENST00000536911ENST00000537393ENST00000538083ENST00000541536ENST00000541847ENST00000542241ENST00000545921ENST00000546136ENSG00000255864ENST00000429944ENST00000446891ENST00000456299ENST00000536729ENST00000538905ENST00000540811ENSG00000256120ENST00000539583ENST00000540733CIL_0007UK_0002ENSMUSG00000087157ENSMUST00000156443
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007UK_0001ENSG00000134532ENST00000367206ENST00000396007ENST00000441133ENST00000451604ENST00000536911ENST00000537393ENST00000541536ENST00000541847ENST00000545921ENST00000546136ENSG00000255864ENST00000429944ENST00000446891ENST00000456299ENST00000536729ENST00000538905ENST00000540811ENSG00000256120ENST00000539583ENST00000540733CIL_0007UK_0002ENSMUSG00000087157ENSMUST00000156443
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134532 ENST00000367206 N/A N/A 0.595±0.00 N/A 0.679±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000381381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396007 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.229±0.00 N/A N/A N/A 31.087±8.27
ENST00000441133 N/A N/A 1.001±0.00 N/A N/A N/A N/A 13.340±0.00 N/A N/A N/A 3.800±0.00 N/A N/A
ENST00000451604 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.498±0.00 N/A 0.164±0.00 0.436±0.00 N/A
ENST00000535530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536911 N/A N/A N/A N/A N/A N/A 0.784±0.00 N/A N/A N/A N/A 4.359±0.00 N/A N/A
ENST00000537393 N/A N/A N/A 1.297±0.00 0.969±0.00 N/A N/A N/A 2.186±0.00 N/A 0.084±0.00 N/A 0.261±0.00 N/A
ENST00000538083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541536 N/A 0.243±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.747±0.00
ENST00000541847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.369±0.00 N/A N/A N/A
ENST00000542241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.178±0.00 N/A N/A
ENST00000546136 N/A 0.047±0.00 0.159±0.00 0.836±0.00 0.979±0.00 0.607±0.16 0.207±0.03 1.424±1.33 0.534±0.08 0.668±0.00 0.066±0.00 0.269±0.11 0.412±0.17 0.712±0.00
ENSG00000255864 ENST00000429944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.427±0.00 N/A 0.428±0.00 N/A
ENST00000446891 0.354±0.00 0.110±0.00 N/A 3.531±2.94 7.107±0.00 1.567±0.93 0.522±0.36 N/A 1.761±1.51 0.468±0.00 1.016±0.00 5.464±4.26 0.761±0.00 0.781±0.00
ENST00000456299 N/A N/A N/A N/A N/A N/A N/A N/A 1.938±0.00 N/A N/A N/A N/A 0.028±0.00
ENST00000536729 0.826±0.00 N/A 14.149±0.00 27.243±0.00 6.703±0.00 5.858±0.00 N/A 13.773±0.00 16.069±15.97 N/A N/A 5.172±4.78 N/A N/A
ENST00000538905 0.113±0.00 N/A 1.106±0.00 0.110±0.00 N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 0.071±0.00 0.040±0.00
ENST00000540811 N/A 0.153±0.00 1.692±0.00 1.836±0.00 2.268±1.79 N/A 1.329±0.00 4.199±0.00 1.600±1.53 0.157±0.00 N/A 1.745±1.23 0.292±0.05 N/A
ENSG00000256120 ENST00000539583 N/A 0.051±0.00 N/A N/A 0.130±0.00 N/A N/A N/A N/A N/A N/A 0.764±0.00 N/A 3.101±1.20
ENST00000540733 0.065±0.00 N/A N/A N/A N/A 0.990±0.00 N/A N/A N/A N/A N/A N/A N/A 1.010±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000087157 ENSMUST00000156443 0.120±0.05 N/A 0.015±0.00 N/A N/A N/A 0.120±0.00 N/A 0.018±0.00 0.088±0.01 N/A N/A N/A N/A

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