C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007X1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs154 VISTA 9606 16:51908698-52510165
GeneTranscriptPositionBiotype
ENSG00000103460 (TOX3)
TOX high mobility group box family member 3 		ENST00000219746 (TOX3-003) 52438008-52547008 protein_coding
ENST00000407228 (TOX3-002) 52438005-52547802 protein_coding
ENST00000563091 (TOX3-004) 52450348-52547419 protein_coding
ENST00000566696 (TOX3-006) 52438006-52445726 retained_intron
ENST00000568436 (TOX3-005) 52464018-52546840 nonsense_mediated_decay
ENSG00000260478 (RP11-142G1.1)
 ENST00000568286 (RP11-142G1.1-001) 52238082-52269440 lincRNA
ENSG00000260887 (CASC22)
cancer susceptibility candidate 22 (non-protein coding) 		ENST00000569713 (CASC22-001) 52258564-52280299 lincRNA
ENSG00000260975 (RP11-142G1.3)
 ENST00000569998 (RP11-142G1.3-001) 52198012-52227956 lincRNA
ENSG00000261470 (RP11-152O14.4)
 ENST00000568711 (RP11-152O14.4-001) 52078622-52080489 antisense
ENSG00000261749 (RP11-152O14.1)
 ENST00000566439 (RP11-152O14.1-001) 52085280-52099067 lincRNA
ENSG00000279427 (RP11-132F7.2)
 ENST00000624321 (RP11-132F7.2-001) 52436772-52437474 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0007X1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs154 VISTA 10090 8:89711558-90312979
GeneTranscriptPositionBiotype
ENSMUSG00000043668 (Tox3)
TOX high mobility group box family member 3 		ENSMUST00000109621 (Tox3-001) 90247040-90348343 protein_coding
ENSMUST00000176034 (Tox3-002) 90257946-90348126 protein_coding
ENSMUST00000176616 (Tox3-003) 90252706-90348131 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007X1_0001ENSG00000103460ENST00000219746ENST00000407228ENST00000563091ENST00000566696ENST00000568436ENSG00000260478ENST00000568286ENSG00000260887ENST00000569713ENSG00000260975ENST00000569998ENSG00000261470ENST00000568711ENSG00000261749ENST00000566439ENSG00000279427ENST00000624321CIL_0007X1_0002ENSMUSG00000043668ENSMUST00000109621ENSMUST00000176034ENSMUST00000176616
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007X1_0001ENSG00000103460ENST00000219746ENST00000407228ENST00000566696ENSG00000260478ENST00000568286ENSG00000260887ENST00000569713ENSG00000260975ENST00000569998ENSG00000261470ENST00000568711ENSG00000261749ENST00000566439ENSG00000279427ENST00000624321CIL_0007X1_0002ENSMUSG00000043668ENSMUST00000109621ENSMUST00000176034ENSMUST00000176616
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103460 ENST00000219746 0.801±0.00 N/A N/A 0.855±0.00 0.444±0.00 0.432±0.00 N/A 5.272±0.00 0.896±0.00 N/A 0.011±0.00 1.777±2.19 0.058±0.05 0.309±0.20
ENST00000407228 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00 0.002±0.00 0.588±0.00 N/A 0.106±0.00
ENST00000563091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566696 N/A N/A 0.436±0.00 N/A 0.267±0.00 N/A N/A N/A N/A 0.032±0.00 N/A 0.289±0.00 N/A N/A
ENST00000568436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260478 ENST00000568286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.032±0.00 N/A 0.162±0.00
ENSG00000260887 ENST00000569713 0.145±0.00 N/A N/A N/A N/A N/A N/A 0.535±0.00 N/A N/A N/A N/A N/A 0.636±0.34
ENSG00000260975 ENST00000569998 0.362±0.00 1.687±0.00 1.365±0.00 1.077±0.84 0.897±0.06 0.321±0.14 0.365±0.04 0.762±0.02 0.682±0.30 0.768±0.18 0.400±0.03 0.648±0.52 1.235±0.00 1.795±0.91
ENSG00000261470 ENST00000568711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.183±0.45
ENSG00000261749 ENST00000566439 N/A N/A N/A 0.058±0.00 N/A N/A N/A N/A N/A 0.294±0.00 N/A N/A N/A 1.733±0.93
ENSG00000279427 ENST00000624321 0.277±0.00 N/A 0.426±0.00 0.375±0.00 0.054±0.00 0.176±0.10 N/A 0.437±0.35 0.431±0.00 N/A N/A 0.423±0.24 N/A 0.083±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043668 ENSMUST00000109621 1.714±0.03 1.566±0.22 0.139±0.07 13.480±11.42 0.432±0.24 5.789±2.17 0.691±0.43 3.335±0.52 0.050±0.05 1.817±0.16 0.020±0.01 2.266±1.57 0.186±0.08 0.305±0.11
ENSMUST00000176034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A
ENSMUST00000176616 N/A N/A N/A N/A 0.082±0.00 N/A N/A N/A 0.050±0.00 N/A 0.094±0.00 N/A 0.149±0.00 N/A

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