C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007XQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1246 VISTA 9606 13:111315720-111916741
GeneTranscriptPositionBiotype
ENSG00000153495 (TEX29)
testis expressed 29 		ENST00000283547 (TEX29-002) 111320668-111344247 protein_coding
ENST00000497241 (TEX29-001) 111316184-111344249 nonsense_mediated_decay
ENSG00000204398 (RP11-65D24.2)
 ENST00000375713 (RP11-65D24.2-001) 111588291-111672608 lincRNA
ENST00000607406 (RP11-65D24.2-002) 111588201-111589941 lincRNA
ENSG00000215881 (RP11-65D24.1)
 ENST00000401043 (RP11-65D24.1-001) 111596009-111642079 lincRNA
ENSG00000226903 (LINC00354)
long intergenic non-protein coding RNA 354 		ENST00000412119 (LINC00354-001) 111899988-111900936 lincRNA
ENST00000440860 (LINC00354-002) 111899985-111901176 lincRNA
CIL_0007XQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1246 VISTA 10090 8:11765991-12366965
GeneTranscriptPositionBiotype
ENSMUSG00000031512 (Tex29)
testis expressed 29 		ENSMUST00000033909 (Tex29-001) 11840474-11855761 protein_coding
ENSMUST00000132536 (Tex29-002) 11842061-11855757 processed_transcript
ENSMUST00000144007 (Tex29-003) 11840611-11844158 processed_transcript
ENSMUST00000166638 (Tex29-201) 11840919-11855705 protein_coding
ENSMUSG00000074473 (A230072I06Rik)
RIKEN cDNA A230072I06 gene 		ENSMUST00000098935 (A230072I06Rik-201) 12278819-12280657 protein_coding
ENSMUSG00000086500 (Gm15875)
predicted gene 15875 		ENSMUST00000152264 (Gm15875-001) 11838978-11840400 antisense
ENSMUSG00000089234 (Gm22207)
predicted gene, 22207 		ENSMUST00000158609 (Gm22207-201) 12356153-12356469 misc_RNA
ENSMUSG00000101899 (RP24-133K20.2)
predicted gene 29175 		ENSMUST00000189500 (RP24-133K20.2-001) 12282211-12282612 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007XQ_0001ENSG00000153495ENST00000283547ENST00000497241ENSG00000204398ENST00000375713ENST00000607406ENSG00000215881ENST00000401043ENSG00000226903ENST00000412119ENST00000440860CIL_0007XQ_0002ENSMUSG00000031512ENSMUST00000033909ENSMUST00000132536ENSMUST00000144007ENSMUST00000166638ENSMUSG00000074473ENSMUST00000098935ENSMUSG00000086500ENSMUST00000152264ENSMUSG00000089234ENSMUST00000158609ENSMUSG00000101899ENSMUST00000189500
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007XQ_0001ENSG00000153495ENST00000283547ENST00000497241ENSG00000204398ENST00000375713ENST00000607406ENSG00000215881ENST00000401043ENSG00000226903ENST00000412119ENST00000440860CIL_0007XQ_0002ENSMUSG00000031512ENSMUST00000033909ENSMUST00000132536ENSMUST00000144007ENSMUST00000166638ENSMUSG00000074473ENSMUST00000098935ENSMUSG00000086500ENSMUST00000152264ENSMUSG00000089234ENSMUST00000158609ENSMUSG00000101899ENSMUST00000189500
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000153495 ENST00000283547 0.258±0.00 0.112±0.00 N/A 0.856±0.28 N/A 0.215±0.00 0.052±0.00 0.138±0.00 0.131±0.00 N/A N/A 0.310±0.11 0.205±0.01 24.531±4.61
ENST00000497241 N/A N/A N/A N/A 0.201±0.00 N/A N/A 0.155±0.00 N/A 0.389±0.00 N/A N/A N/A N/A
ENSG00000204398 ENST00000375713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.671±0.40
ENST00000607406 N/A N/A N/A N/A N/A 0.087±0.00 0.029±0.00 0.055±0.00 N/A N/A 0.112±0.00 N/A N/A 0.231±0.08
ENSG00000215881 ENST00000401043 N/A N/A N/A 0.152±0.00 0.192±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.296±0.00
ENSG00000226903 ENST00000412119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.585±0.80
ENST00000440860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.870±0.32
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031512 ENSMUST00000033909 N/A N/A N/A N/A 0.158±0.00 N/A 0.078±0.04 0.068±0.03 N/A N/A N/A N/A N/A 70.126±27.92
ENSMUST00000132536 N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 0.016±0.00 N/A N/A 0.209±0.04 0.122±0.01 N/A
ENSMUST00000144007 N/A N/A 0.030±0.00 N/A 0.127±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166638 N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A 0.326±0.00 N/A 159.118±0.00
ENSMUSG00000074473 ENSMUST00000098935 N/A N/A N/A 0.071±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086500 ENSMUST00000152264 N/A N/A N/A 0.186±0.00 N/A N/A N/A N/A N/A N/A N/A 0.293±0.00 N/A 6.265±1.02
ENSMUSG00000089234 ENSMUST00000158609 N/A N/A N/A 0.500±0.29 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000101899 ENSMUST00000189500 N/A N/A N/A 0.093±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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