C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007YX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1011 VISTA 9606 18:78401276-79002723
GeneTranscriptPositionBiotype
ENSG00000201723 (Y_RNA)
Y RNA 		ENST00000364853 (Y_RNA.1-489) 78544095-78544188 misc_RNA
ENSG00000263146 (RP11-849I19.1)
 ENST00000572007 (RP11-849I19.1-002) 78977288-78977883 lincRNA
ENST00000573860 (RP11-849I19.1-003) 78978351-78979074 lincRNA
ENST00000575722 (RP11-849I19.1-001) 78976555-78978843 lincRNA
ENST00000583511 (RP11-849I19.1-004) 78977095-78978843 lincRNA
ENSG00000265101 (CTD-2382H12.1)
 ENST00000580639 (CTD-2382H12.1-001) 78925064-78927441 lincRNA
ENSG00000266273 (RP11-715C4.1)
 ENST00000580487 (RP11-715C4.1-001) 78795612-78796672 lincRNA
CIL_0007YX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1011 VISTA 10090 18:80865710-81467180
GeneTranscriptPositionBiotype
ENSMUSG00000024565 (Sall3)
sal-like 3 (Drosophila) 		ENSMUST00000057950 (Sall3-201) 80966376-80986578 protein_coding
ENSMUSG00000024566 (Atp9b)
ATPase, class II, type 9B 		ENSMUST00000091790 (Atp9b-201) 80734143-80934058 protein_coding
ENSMUSG00000097181 (4930594M17Rik)
RIKEN cDNA 4930594M17 gene 		ENSMUST00000181204 (4930594M17Rik-001) 81226204-81236066 lincRNA
ENSMUSG00000098720 (Gm27239)
predicted gene 27239 		ENSMUST00000184638 (Gm27239-001) 80987456-80988575 antisense
ENSMUSG00000098880 (Gm27238)
predicted gene 27238 		ENSMUST00000185180 (Gm27238-001) 80978913-80987869 sense_overlapping

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007YX_0001ENSG00000201723ENST00000364853ENSG00000263146ENST00000572007ENST00000573860ENST00000575722ENST00000583511ENSG00000265101ENST00000580639ENSG00000266273ENST00000580487CIL_0007YX_0002ENSMUSG00000024565ENSMUST00000057950ENSMUSG00000024566ENSMUST00000091790ENSMUSG00000097181ENSMUST00000181204ENSMUSG00000098720ENSMUST00000184638ENSMUSG00000098880ENSMUST00000185180
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007YX_0001ENSG00000201723ENST00000364853ENSG00000263146ENST00000572007ENST00000573860ENST00000575722ENST00000583511ENSG00000265101ENST00000580639ENSG00000266273ENST00000580487CIL_0007YX_0002ENSMUSG00000024565ENSMUST00000057950ENSMUSG00000024566ENSMUST00000091790ENSMUSG00000097181ENSMUST00000181204ENSMUSG00000098720ENSMUST00000184638ENSMUSG00000098880ENSMUST00000185180
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000201723 ENST00000364853 N/A N/A N/A N/A N/A N/A 0.202±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000263146 ENST00000572007 N/A N/A N/A 2.378±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.124±0.00 2.093±0.00
ENST00000573860 N/A N/A N/A N/A N/A N/A 0.183±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000575722 N/A N/A 0.144±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A
ENST00000583511 N/A N/A 0.412±0.00 5.707±0.00 N/A N/A N/A 1.688±0.00 N/A N/A N/A N/A N/A 1.756±0.10
ENSG00000265101 ENST00000580639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.212±0.07
ENSG00000266273 ENST00000580487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.997±0.42
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024565 ENSMUST00000057950 N/A 0.009±0.01 0.066±0.02 3.207±2.38 N/A 0.012±0.01 0.012±0.01 0.706±0.12 0.005±0.01 0.012±0.01 0.007±0.00 0.029±0.02 0.054±0.03 0.734±0.37
ENSMUSG00000024566 ENSMUST00000091790 6.663±1.71 10.128±6.51 8.489±4.42 8.889±2.60 9.817±5.77 6.898±1.29 1.860±0.48 5.243±1.96 4.076±2.15 9.502±1.72 2.402±0.98 10.226±3.62 7.983±4.93 11.810±3.75
ENSMUSG00000097181 ENSMUST00000181204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.488±0.80
ENSMUSG00000098720 ENSMUST00000184638 N/A N/A N/A 0.250±0.06 N/A N/A 0.052±0.00 0.056±0.00 N/A N/A N/A N/A N/A 0.484±0.25
ENSMUSG00000098880 ENSMUST00000185180 N/A N/A N/A 0.337±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.210±0.10

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