C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000800_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm26 VISTA 9606 6:162116037-162718515
GeneTranscriptPositionBiotype
ENSG00000227913 (KRT8P44)
keratin 8 pseudogene 44 		ENST00000441609 (KRT8P44-001) 162568379-162569728 processed_pseudogene
CIL_000800_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm26 VISTA 10090 17:10785724-11388280
GeneTranscriptPositionBiotype
ENSMUSG00000023826 (Park2)
Parkinson disease (autosomal recessive, juvenile) 2, parkin 		ENSMUST00000066658 (Park2-003) 10840384-11557234 retained_intron
ENSMUST00000097413 (Park2-002) 10840391-10945412 processed_transcript
ENSMUST00000168593 (Park2-201) 11067125-11493173 protein_coding
ENSMUST00000179624 (Park2-202) 11838602-11867561 protein_coding
ENSMUST00000186167 (Park2-004) 10840384-11557234 retained_intron
ENSMUST00000186406 (Park2-007) 11303647-11610945 protein_coding
ENSMUST00000190849 (Park2-005) 11845210-11867561 processed_transcript
ENSMUST00000190894 (Park2-006) 12029916-12063358 processed_transcript
ENSMUST00000191124 (Park2-001) 10840384-12063361 protein_coding
ENSMUSG00000037196 (Pacrg)
PARK2 co-regulated 		ENSMUST00000041463 (Pacrg-001) 10403012-10840311 protein_coding
ENSMUST00000160599 (Pacrg-002) 10576478-10631067 processed_transcript
ENSMUSG00000089907 (Gm16169)
predicted gene 16169 		ENSMUST00000159155 (Gm16169-002) 10807839-10816582 retained_intron
ENSMUST00000162432 (Gm16169-001) 10807834-10826625 antisense
ENSMUSG00000099797 (RP23-317H14.1)
predicted gene 3145 		ENSMUST00000188584 (RP23-317H14.1-001) 10898995-10899214 processed_pseudogene
ENSMUSG00000100402 (RP23-364J24B.1)
predicted gene 28505 		ENSMUST00000190466 (RP23-364J24B.1-001) 11082250-11089468 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000800_0001ENSG00000227913ENST00000441609CIL_000800_0002ENSMUSG00000023826ENSMUST00000066658ENSMUST00000097413ENSMUST00000168593ENSMUST00000179624ENSMUST00000186167ENSMUST00000186406ENSMUST00000190849ENSMUST00000190894ENSMUST00000191124ENSMUSG00000037196ENSMUST00000041463ENSMUST00000160599ENSMUSG00000089907ENSMUST00000159155ENSMUST00000162432ENSMUSG00000099797ENSMUST00000188584ENSMUSG00000100402ENSMUST00000190466
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000800_0001ENSG00000227913ENST00000441609CIL_000800_0002ENSMUSG00000023826ENSMUST00000066658ENSMUST00000097413ENSMUST00000168593ENSMUST00000186167ENSMUST00000190894ENSMUST00000191124ENSMUSG00000037196ENSMUST00000041463ENSMUST00000160599ENSMUSG00000089907ENSMUST00000159155ENSMUST00000162432ENSMUSG00000099797ENSMUST00000188584ENSMUSG00000100402ENSMUST00000190466
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000227913 ENST00000441609 N/A 0.028±0.00 0.030±0.00 0.031±0.00 N/A N/A 0.062±0.00 N/A 0.013±0.00 0.059±0.00 N/A N/A N/A 0.037±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023826 ENSMUST00000066658 N/A N/A N/A 1.624±0.00 N/A 0.365±0.07 N/A N/A 3.975±1.34 N/A N/A 1.084±0.00 0.298±0.16 N/A
ENSMUST00000097413 N/A N/A N/A N/A N/A N/A 0.274±0.07 N/A 0.021±0.01 N/A 0.192±0.00 N/A 0.031±0.00 N/A
ENSMUST00000168593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.132±0.00 3.807±0.00
ENSMUST00000179624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186167 0.888±0.15 1.296±0.68 1.865±0.00 1.269±0.00 1.098±0.56 0.752±0.31 1.291±0.34 1.578±0.45 0.610±0.51 1.071±0.17 1.314±0.26 0.764±0.21 0.125±0.03 2.518±0.32
ENSMUST00000186406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190894 N/A N/A N/A N/A N/A 0.238±0.00 N/A N/A 0.031±0.00 N/A N/A 0.485±0.27 0.418±0.42 N/A
ENSMUST00000191124 2.077±0.90 1.485±0.72 1.263±0.01 1.251±0.79 0.970±0.30 0.310±0.13 0.807±0.43 1.780±0.49 0.365±0.33 1.189±0.06 1.318±0.38 1.436±0.63 0.158±0.10 6.147±2.43
ENSMUSG00000037196 ENSMUST00000041463 0.206±0.07 0.594±0.17 0.859±0.20 3.192±0.68 0.289±0.17 0.187±0.10 0.379±0.11 0.670±0.22 0.056±0.03 1.123±0.17 1.190±0.22 1.663±0.72 0.204±0.10 116.808±46.03
ENSMUST00000160599 N/A 0.856±0.00 N/A N/A 0.786±0.00 N/A N/A N/A 0.138±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000089907 ENSMUST00000159155 N/A N/A 0.008±0.00 0.052±0.02 0.114±0.06 N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.00
ENSMUST00000162432 0.029±0.00 N/A 0.004±0.00 0.017±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.068±0.03
ENSMUSG00000099797 ENSMUST00000188584 1.392±0.00 N/A 0.404±0.06 0.410±0.22 2.077±0.51 1.444±0.00 1.007±0.32 1.543±0.90 0.788±0.30 1.066±0.00 N/A 5.689±0.00 0.112±0.00 0.617±0.00
ENSMUSG00000100402 ENSMUST00000190466 N/A 0.290±0.00 N/A 0.207±0.14 0.133±0.04 N/A 0.059±0.00 0.145±0.00 N/A N/A N/A 0.301±0.00 N/A N/A

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