C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000803_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm870 VISTA 9606 11:115443250-116048688
GeneTranscriptPositionBiotype
ENSG00000182985 (CADM1)
cell adhesion molecule 1 		ENST00000331581 (CADM1-003) 115176295-115504565 protein_coding
ENST00000441886 (CADM1-017) 115190609-115214694 processed_transcript
ENST00000452722 (CADM1-001) 115169236-115504415 protein_coding
ENST00000536727 (CADM1-006) 115174307-115504415 protein_coding
ENST00000536781 (CADM1-012) 115399084-115504415 processed_transcript
ENST00000537058 (CADM1-005) 115174307-115504415 protein_coding
ENST00000537140 (CADM1-004) 115169236-115504523 processed_transcript
ENST00000540373 (CADM1-016) 115214699-115218144 retained_intron
ENST00000540852 (CADM1-018) 115176408-115191046 retained_intron
ENST00000540951 (CADM1-021) 115231440-115504415 nonsense_mediated_decay
ENST00000541434 (CADM1-007) 115214490-115504394 retained_intron
ENST00000542447 (CADM1-002) 115173625-115504523 protein_coding
ENST00000542450 (CADM1-015) 115217940-115240980 protein_coding
ENST00000543249 (CADM1-010) 115229220-115504957 protein_coding
ENST00000543375 (CADM1-020) 115176330-115194110 processed_transcript
ENST00000543540 (CADM1-013) 115229156-115287477 protein_coding
ENST00000545094 (CADM1-014) 115229189-115256891 protein_coding
ENST00000545380 (CADM1-008) 115175341-115504389 protein_coding
ENST00000545960 (CADM1-011) 115169218-115198440 processed_transcript
ENST00000546000 (CADM1-019) 115176327-115179111 retained_intron
ENST00000612235 (CADM1-201) 115169589-115240422 protein_coding
ENST00000612471 (CADM1-202) 115173626-115240421 protein_coding
ENST00000616271 (CADM1-203) 115176467-115240421 protein_coding
ENST00000621043 (CADM1-204) 115176467-115240421 protein_coding
ENST00000621709 (CADM1-205) 115173626-115240421 protein_coding
ENSG00000239600 (AP000797.2)
 ENST00000478870 (AP000797.2-001) 115951105-115951491 processed_pseudogene
ENSG00000244259 (AP000797.1)
 ENST00000475768 (AP000797.1-001) 115950196-115950801 processed_pseudogene
ENSG00000246100 (LINC00900)
long intergenic non-protein coding RNA 900 		ENST00000499809 (LINC00900-001) 115754248-115760194 lincRNA
ENST00000501294 (LINC00900-002) 115757451-115760627 lincRNA
ENST00000514294 (LINC00900-003) 115757463-115760197 lincRNA
ENST00000535683 (LINC00900-004) 115757920-115760200 lincRNA
ENST00000537070 (LINC00900-005) 115757717-115760186 lincRNA
ENST00000602803 (LINC00900-006) 115758276-115758853 lincRNA
ENSG00000255599 (AP000997.1)
 ENST00000424313 (AP000997.1-001) 115628065-115629743 lincRNA
ENSG00000255689 (RP11-136I14.5)
 ENST00000306533 (RP11-136I14.5-001) 115582297-115600339 lincRNA
ENSG00000257067 (AP000797.4)
 ENST00000537491 (AP000797.4-001) 115932774-115942995 lincRNA
ENST00000539222 (AP000797.4-002) 115932857-115940210 lincRNA
ENSG00000257087 (RP11-136I14.3)
 ENST00000537926 (RP11-136I14.3-001) 115538869-115539384 processed_pseudogene
ENSG00000260254 (AP000997.2)
 ENST00000564619 (AP000997.2-001) 115638563-115646962 lincRNA
ENSG00000279771 (AP000997.3)
 ENST00000623333 (AP000997.3-001) 115659168-115661417 TEC
ENSG00000279818 (CTC-774J1.1)
 ENST00000623807 (CTC-774J1.1-001) 115731942-115734742 TEC
CIL_000803_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm870 VISTA 10090 9:46978512-47582714
GeneTranscriptPositionBiotype
ENSMUSG00000032076 (Cadm1)
cell adhesion molecule 1 		ENSMUST00000034581 (Cadm1-006) 47530373-47850390 protein_coding
ENSMUST00000085909 (Cadm1-002) 47530257-47851029 protein_coding
ENSMUST00000114547 (Cadm1-003) 47530257-47853380 protein_coding
ENSMUST00000114548 (Cadm1-001) 47530173-47853385 protein_coding
ENSMUST00000124073 (Cadm1-007) 47530352-47819080 retained_intron
ENSMUST00000143026 (Cadm1-005) 47530244-47857637 protein_coding
ENSMUST00000148925 (Cadm1-009) 47530352-47792583 retained_intron
ENSMUST00000151624 (Cadm1-008) 47530373-47814054 processed_transcript
ENSMUST00000152459 (Cadm1-004) 47530211-47850587 protein_coding
ENSMUSG00000094893 (Gm4791)
predicted gene 4791 		ENSMUST00000178065 (Gm4791-201) 46998931-47003338 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000182985 ENST00000331581 N/A N/A N/A 6.721±0.00 N/A N/A N/A 8.000±0.00 4.065±2.26 N/A N/A N/A N/A N/A
ENST00000441886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536727 N/A N/A N/A 6.660±0.00 N/A 0.506±0.00 N/A N/A N/A N/A N/A N/A N/A 7.861±0.00
ENST00000536781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537058 0.595±0.00 N/A 1.309±0.00 N/A 1.516±0.00 0.613±0.00 1.544±0.00 N/A N/A 6.201±0.00 N/A 1.829±0.00 3.801±0.00 N/A
ENST00000537140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541434 N/A N/A 4.223±0.00 N/A N/A N/A 3.243±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000542447 N/A N/A 0.866±0.00 5.771±2.07 1.406±0.00 N/A 0.939±0.00 3.305±0.00 1.299±0.00 7.738±1.34 N/A 2.124±0.00 2.436±0.30 5.374±0.00
ENST00000542450 N/A N/A N/A N/A N/A 1.452±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.746±0.00 N/A N/A
ENST00000543375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545380 N/A N/A N/A N/A 1.515±0.00 N/A 1.520±0.21 N/A 2.301±0.00 N/A N/A 2.564±1.29 20.006±0.00 29.038±0.00
ENST00000545960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612471 N/A N/A N/A 3.884±0.00 N/A 1.192±0.00 2.385±0.00 1.299±0.00 N/A N/A 0.602±0.52 N/A N/A N/A
ENST00000616271 N/A N/A N/A N/A N/A N/A N/A 7.822±0.00 5.972±0.00 N/A N/A N/A N/A 8.237±0.00
ENST00000621043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621709 1.552±0.00 2.793±0.00 2.814±0.00 10.317±0.00 1.677±0.82 2.447±2.19 1.503±0.81 4.754±0.25 1.830±0.09 8.144±2.37 0.433±0.00 2.541±1.75 8.230±2.23 6.254±0.44
ENSG00000239600 ENST00000478870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00
ENSG00000244259 ENST00000475768 0.098±0.00 0.251±0.00 N/A N/A 0.127±0.00 0.047±0.00 0.045±0.00 0.050±0.00 N/A 0.022±0.00 N/A 0.033±0.00 N/A 0.070±0.00
ENSG00000246100 ENST00000499809 0.140±0.00 N/A N/A 0.376±0.00 0.117±0.00 0.065±0.01 0.051±0.00 0.077±0.00 0.097±0.07 0.104±0.02 0.007±0.00 0.260±0.17 0.166±0.01 N/A
ENST00000501294 0.130±0.00 N/A N/A 0.499±0.00 N/A N/A N/A N/A N/A 0.239±0.00 N/A 0.394±0.00 0.270±0.00 N/A
ENST00000514294 N/A N/A N/A 0.325±0.00 0.214±0.00 0.047±0.00 0.113±0.00 0.417±0.00 0.248±0.20 N/A 0.208±0.00 0.147±0.00 0.242±0.00 0.391±0.00
ENST00000535683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537070 N/A N/A N/A N/A 0.664±0.00 0.107±0.00 N/A N/A N/A N/A N/A 0.170±0.00 0.414±0.00 0.793±0.00
ENST00000602803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000255599 ENST00000424313 N/A N/A N/A 0.104±0.00 0.484±0.00 0.086±0.00 0.079±0.00 0.045±0.00 0.038±0.00 N/A N/A 0.066±0.00 0.142±0.00 0.313±0.00
ENSG00000255689 ENST00000306533 N/A 0.078±0.00 N/A 0.039±0.00 0.134±0.09 N/A N/A N/A N/A N/A N/A 0.096±0.00 N/A 0.104±0.00
ENSG00000257067 ENST00000537491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.049±0.00 N/A N/A
ENST00000539222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.438±0.00
ENSG00000257087 ENST00000537926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A
ENSG00000260254 ENST00000564619 N/A N/A N/A 0.009±0.00 N/A N/A 0.020±0.00 0.078±0.00 N/A N/A N/A N/A N/A 0.038±0.03
ENSG00000279771 ENST00000623333 N/A 0.259±0.00 N/A 0.086±0.00 0.181±0.04 N/A 0.043±0.01 0.029±0.00 0.025±0.00 0.069±0.00 0.008±0.00 0.020±0.00 N/A 0.009±0.00
ENSG00000279818 ENST00000623807 N/A 0.042±0.00 N/A 0.005±0.00 0.037±0.00 N/A 0.009±0.00 0.019±0.00 N/A N/A 0.016±0.00 0.004±0.00 0.014±0.00 0.269±0.13
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032076 ENSMUST00000034581 2.226±1.21 2.524±0.00 N/A 47.888±0.00 1.672±0.00 1.318±0.34 0.668±0.22 N/A 4.431±1.35 23.722±3.70 1.482±0.22 N/A 0.763±0.00 12.334±1.52
ENSMUST00000085909 N/A 1.341±0.25 N/A N/A 0.700±0.11 0.890±0.46 N/A 0.896±0.35 1.199±0.22 N/A 0.926±0.21 1.992±0.68 0.661±0.15 12.201±7.43
ENSMUST00000114547 2.941±2.17 4.094±0.41 4.402±0.35 N/A 1.304±0.11 1.164±0.30 0.525±0.13 1.574±0.40 2.842±0.85 40.097±1.00 0.327±0.05 4.429±1.01 1.705±1.85 N/A
ENSMUST00000114548 N/A N/A N/A 19.028±8.17 N/A 0.392±0.00 N/A N/A N/A N/A 0.495±0.15 N/A N/A 6.600±2.31
ENSMUST00000124073 N/A N/A N/A N/A 2.715±0.00 0.716±0.12 0.451±0.00 0.651±0.00 2.538±1.00 N/A N/A 3.296±1.23 N/A N/A
ENSMUST00000143026 N/A 2.676±0.60 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151624 2.927±0.00 4.545±1.27 N/A N/A 1.410±0.68 1.017±0.00 0.393±0.00 N/A 1.095±0.00 N/A N/A 3.257±0.63 2.714±0.00 14.240±0.00
ENSMUST00000152459 N/A N/A N/A N/A N/A N/A 0.196±0.00 N/A N/A N/A 1.099±0.00 4.136±0.00 3.719±0.39 17.251±14.04
ENSMUSG00000094893 ENSMUST00000178065 0.318±0.00 N/A N/A 0.894±0.00 N/A N/A N/A N/A N/A 0.290±0.03 N/A 0.958±0.33 N/A 1.099±1.30

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