C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00081U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs653 VISTA 9606 3:137167122-137768024
GeneTranscriptPositionBiotype
ENSG00000168875 (SOX14)
SRY (sex determining region Y)-box 14 		ENST00000306087 (SOX14-001) 137764284-137766338 protein_coding
ENSG00000201325 (RNA5SP142)
RNA, 5S ribosomal pseudogene 142 		ENST00000364455 (RNA5SP142-201) 137518134-137518255 rRNA
ENSG00000242070 (NPM1P17)
nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 17 		ENST00000479221 (NPM1P17-001) 137723774-137724543 processed_pseudogene
ENSG00000243886 (RP11-575C1.1)
 ENST00000474107 (RP11-575C1.1-001) 137535572-137536142 processed_pseudogene
CIL_00081U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs653 VISTA 10090 9:99830871-100431770
GeneTranscriptPositionBiotype
ENSMUSG00000053747 (Sox14)
SRY (sex determining region Y)-box 14 		ENSMUST00000054819 (Sox14-001) 99874106-99876170 protein_coding
ENSMUST00000183065 (Sox14-002) 99874220-99875655 protein_coding
ENSMUSG00000099631 (RP23-14N2.2)
predicted gene 8641 		ENSMUST00000186995 (RP23-14N2.2-001) 99946564-99947389 processed_pseudogene
ENSMUSG00000100122 (RP23-368K22.2)
predicted gene 28267 		ENSMUST00000191093 (RP23-368K22.2-001) 100404495-100404759 processed_pseudogene
ENSMUSG00000101042 (RP24-294E6.1)
predicted gene 28167 		ENSMUST00000187644 (RP24-294E6.1-001) 100321611-100323524 lincRNA
ENSMUSG00000101584 (RP23-14N2.1)
RIKEN cDNA 4930519F24 gene 		ENSMUST00000185764 (RP23-14N2.1-001) 100022300-100034672 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisCIL_00081U_0001ENSG00000168875ENST00000306087ENSG00000201325ENST00000364455ENSG00000242070ENST00000479221ENSG00000243886ENST00000474107CIL_00081U_0002ENSMUSG00000053747ENSMUST00000054819ENSMUST00000183065ENSMUSG00000099631ENSMUST00000186995ENSMUSG00000100122ENSMUST00000191093ENSMUSG00000101042ENSMUST00000187644ENSMUSG00000101584ENSMUST00000185764
Region; Gene Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisCIL_00081U_0001ENSG00000168875ENST00000306087ENSG00000201325ENST00000364455ENSG00000242070ENST00000479221ENSG00000243886ENST00000474107CIL_00081U_0002ENSMUSG00000053747ENSMUST00000054819ENSMUST00000183065ENSMUSG00000099631ENSMUST00000186995ENSMUSG00000100122ENSMUST00000191093ENSMUSG00000101042ENSMUST00000187644ENSMUSG00000101584ENSMUST00000185764
Gene Transcript Adipose Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSG00000168875 ENST00000306087 N/A N/A 0.067±0.00 N/A N/A 0.033±0.00 N/A N/A N/A 2.787±0.74 0.048±0.02
ENSG00000201325 ENST00000364455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.820±0.00
ENSG00000242070 ENST00000479221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.020±0.00
ENSG00000243886 ENST00000474107 N/A N/A N/A 0.123±0.00 0.095±0.00 N/A 0.053±0.00 0.179±0.00 N/A N/A 0.115±0.00
Gene Transcript Adipose Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUSG00000053747 ENSMUST00000054819 N/A N/A 7.147±4.97 0.092±0.03 N/A N/A N/A N/A N/A 0.003±0.00 0.160±0.04
ENSMUST00000183065 N/A N/A 0.039±0.00 0.194±0.14 N/A N/A 0.021±0.00 N/A N/A 0.009±0.00 N/A
ENSMUSG00000099631 ENSMUST00000186995 0.106±0.00 0.011±0.00 0.020±0.01 N/A 0.068±0.02 0.051±0.00 0.045±0.03 0.063±0.01 0.669±0.86 0.059±0.05 0.062±0.00
ENSMUSG00000100122 ENSMUST00000191093 N/A N/A N/A 0.597±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000101042 ENSMUST00000187644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.480±0.28
ENSMUSG00000101584 ENSMUST00000185764 N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A 4.493±4.85

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