C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00082C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs530 VISTA 9606 6:98676848-99278971
GeneTranscriptPositionBiotype
ENSG00000112234 (FBXL4)
F-box and leucine-rich repeat protein 4 		ENST00000229971 (FBXL4-201) 98873725-98948006 protein_coding
ENST00000369244 (FBXL4-001) 98868538-98947926 protein_coding
ENSG00000146267 (FAXC)
failed axon connections homolog (Drosophila) 		ENST00000389677 (FAXC-001) 99271169-99349655 protein_coding
ENST00000461803 (FAXC-002) 99280735-99284212 processed_transcript
ENST00000480148 (FAXC-003) 99323483-99350062 processed_transcript
ENST00000538471 (FAXC-201) 99280667-99342934 protein_coding
ENSG00000184486 (POU3F2)
POU class 3 homeobox 2 		ENST00000328345 (POU3F2-001) 98834592-98839490 protein_coding
ENSG00000187472 (RP11-67P15.1)
 ENST00000340697 (RP11-67P15.1-001) 98780257-98793992 processed_pseudogene
ENSG00000232699 (BDH2P1)
3-hydroxybutyrate dehydrogenase, type 2 pseudogene 1 		ENST00000602288 (BDH2P1-001) 99174744-99175479 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00082C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs530 VISTA 10090 4:22000832-22603030
GeneTranscriptPositionBiotype
ENSMUSG00000040410 (Fbxl4)
F-box and leucine-rich repeat protein 4 		ENSMUST00000039234 (Fbxl4-001) 22357543-22434091 protein_coding
ENSMUST00000131972 (Fbxl4-005) 22357543-22376725 processed_transcript
ENSMUST00000184455 (Fbxl4-002) 22357571-22434088 nonsense_mediated_decay
ENSMUST00000184582 (Fbxl4-004) 22357616-22434075 nonsense_mediated_decay
ENSMUST00000185029 (Fbxl4-003) 22357560-22434064 nonsense_mediated_decay
ENSMUSG00000077561 (Gm24607)
predicted gene, 24607 		ENSMUST00000104373 (Gm24607-201) 22396570-22396702 snoRNA
ENSMUSG00000080997 (Gm11885)
predicted gene 11885 		ENSMUST00000118473 (Gm11885-001) 22006762-22008189 processed_pseudogene
ENSMUSG00000081810 (Gm11878)
predicted gene 11878 		ENSMUST00000117908 (Gm11878-001) 22519628-22520027 processed_pseudogene
ENSMUSG00000083376 (Gm11882)
predicted gene 11882 		ENSMUST00000121463 (Gm11882-001) 22275833-22276338 processed_pseudogene
ENSMUSG00000095139 (Pou3f2)
POU domain, class 3, transcription factor 2 		ENSMUST00000178174 (Pou3f2-001) 22482780-22488366 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00082C_0001ENSG00000112234ENST00000229971ENST00000369244ENSG00000146267ENST00000389677ENST00000461803ENST00000480148ENST00000538471ENSG00000184486ENST00000328345ENSG00000187472ENST00000340697ENSG00000232699ENST00000602288CIL_00082C_0002ENSMUSG00000040410ENSMUST00000039234ENSMUST00000131972ENSMUST00000184455ENSMUST00000184582ENSMUST00000185029ENSMUSG00000077561ENSMUST00000104373ENSMUSG00000080997ENSMUST00000118473ENSMUSG00000081810ENSMUST00000117908ENSMUSG00000083376ENSMUST00000121463ENSMUSG00000095139ENSMUST00000178174
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00082C_0001ENSG00000112234ENST00000229971ENST00000369244ENSG00000146267ENST00000389677ENST00000461803ENST00000480148ENST00000538471ENSG00000184486ENST00000328345ENSG00000187472ENST00000340697ENSG00000232699ENST00000602288CIL_00082C_0002ENSMUSG00000040410ENSMUST00000039234ENSMUST00000131972ENSMUST00000184455ENSMUST00000184582ENSMUST00000185029ENSMUSG00000077561ENSMUST00000104373ENSMUSG00000080997ENSMUST00000118473ENSMUSG00000081810ENSMUST00000117908ENSMUSG00000083376ENSMUST00000121463ENSMUSG00000095139ENSMUST00000178174
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112234 ENST00000229971 N/A N/A N/A 0.803±0.00 1.303±0.43 1.281±0.13 1.413±0.00 2.607±0.29 1.117±0.34 1.901±1.10 0.854±0.00 1.549±0.23 1.556±0.43 1.697±0.02
ENST00000369244 1.400±0.00 0.758±0.00 N/A 0.662±0.57 1.232±0.00 0.654±0.00 0.860±0.51 1.559±0.00 0.400±0.00 1.461±0.45 0.959±0.48 0.585±0.32 0.355±0.09 0.486±0.00
ENSG00000146267 ENST00000389677 0.016±0.00 0.063±0.00 N/A 1.715±0.27 0.062±0.00 0.492±0.00 0.008±0.00 0.004±0.00 0.631±0.63 0.147±0.08 N/A 0.048±0.03 0.029±0.01 0.050±0.00
ENST00000461803 N/A N/A N/A N/A N/A 0.748±0.00 0.028±0.00 N/A 3.092±0.00 N/A 0.277±0.17 N/A N/A N/A
ENST00000480148 0.110±0.00 N/A N/A N/A 0.789±0.30 4.317±0.00 0.032±0.00 0.627±0.00 5.923±0.00 0.836±0.13 N/A 0.421±0.28 0.533±0.13 0.880±0.10
ENST00000538471 N/A 0.548±0.00 N/A 9.247±0.96 0.547±0.18 7.457±0.00 0.065±0.00 0.319±0.00 2.688±0.00 1.591±0.56 N/A 0.783±0.63 1.151±0.50 1.973±0.12
ENSG00000184486 ENST00000328345 0.013±0.00 0.014±0.00 N/A 2.002±0.52 0.008±0.00 0.017±0.00 0.008±0.01 0.005±0.00 0.010±0.00 0.033±0.00 N/A 0.007±0.00 0.017±0.00 0.275±0.11
ENSG00000187472 ENST00000340697 0.049±0.00 0.157±0.00 N/A N/A 0.205±0.00 N/A N/A 0.051±0.00 N/A N/A N/A 0.595±0.00 N/A 0.136±0.00
ENSG00000232699 ENST00000602288 N/A N/A N/A N/A N/A 0.018±0.00 N/A 0.019±0.00 N/A 0.018±0.00 0.298±0.00 N/A N/A 0.017±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040410 ENSMUST00000039234 20.495±12.01 13.442±1.96 7.230±1.31 3.544±0.51 16.609±3.77 5.999±1.10 4.746±0.38 11.248±2.22 6.723±3.79 9.577±1.40 9.604±0.67 9.049±3.37 4.386±1.12 1.529±0.41
ENSMUST00000131972 N/A 14.433±5.44 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184455 N/A N/A N/A 0.784±0.00 N/A 1.010±0.00 N/A N/A 0.787±0.03 N/A 1.105±0.00 2.031±0.24 N/A 0.549±0.06
ENSMUST00000184582 N/A N/A N/A 1.177±0.00 N/A N/A N/A N/A N/A N/A N/A 1.205±0.00 N/A N/A
ENSMUST00000185029 1.176±0.00 N/A 1.081±0.21 0.888±0.00 1.876±0.00 0.657±0.00 0.522±0.00 N/A 0.550±0.05 1.196±0.05 N/A 1.610±0.53 0.693±0.07 0.680±0.06
ENSMUSG00000077561 ENSMUST00000104373 N/A N/A N/A 32.531±0.00 N/A N/A N/A N/A 10.384±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000080997 ENSMUST00000118473 N/A N/A N/A 0.052±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.04 0.033±0.00
ENSMUSG00000081810 ENSMUST00000117908 N/A N/A 0.033±0.00 5.409±5.29 N/A N/A N/A N/A 5.306±11.66 N/A 0.139±0.02 0.163±0.04 0.543±0.55 0.125±0.00
ENSMUSG00000083376 ENSMUST00000121463 0.098±0.00 N/A N/A N/A 0.247±0.00 N/A N/A N/A N/A N/A N/A 0.445±0.06 N/A N/A
ENSMUSG00000095139 ENSMUST00000178174 0.012±0.01 0.048±0.03 0.008±0.00 11.722±7.09 0.041±0.03 0.021±0.00 0.006±0.00 0.017±0.01 0.013±0.02 0.115±0.02 0.010±0.01 0.046±0.03 0.008±0.00 0.027±0.01

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