C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00082H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs536 VISTA 9606 19:31661795-32262988
GeneTranscriptPositionBiotype
ENSG00000221504 (AC011456.1)
 ENST00000408577 (AC011456.1-201) 31926573-31926688 miRNA
ENSG00000267012 (CTC-360P9.1)
 ENST00000592270 (CTC-360P9.1-001) 31886704-31908284 lincRNA
ENSG00000267094 (CTC-360P9.5)
 ENST00000593211 (CTC-360P9.5-001) 31922884-31945398 lincRNA
ENSG00000267204 (AC011518.1)
 ENST00000591212 (AC011518.1-001) 32102088-32105916 lincRNA
ENSG00000267489 (CTC-360P9.4)
 ENST00000590053 (CTC-360P9.4-001) 31967099-32025791 lincRNA
ENST00000593082 (CTC-360P9.4-002) 32002491-32025777 lincRNA
ENSG00000267684 (CTC-360P9.2)
 ENST00000590021 (CTC-360P9.2-001) 31965642-31966969 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00082H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs536 VISTA 10090 7:35833666-36434869
GeneTranscriptPositionBiotype
ENSMUSG00000066543 (Rpl17-ps9)
ribosomal protein L17, pseudogene 9 		ENSMUST00000119541 (Rpl17-ps9-001) 36118274-36118828 processed_pseudogene
ENSMUSG00000093359 (Gm23292)
predicted gene, 23292 		ENSMUST00000175618 (Gm23292-201) 36302515-36302615 miRNA
ENSMUSG00000098016 (Gm9211)
predicted gene 9211 		ENSMUST00000182882 (Gm9211-001) 36234292-36235266 processed_pseudogene
ENSMUSG00000100387 (RP23-466H15.2)
predicted gene 28514 		ENSMUST00000187488 (RP23-466H15.2-001) 35838260-35839570 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00082H_0001ENSG00000221504ENST00000408577ENSG00000267012ENST00000592270ENSG00000267094ENST00000593211ENSG00000267204ENST00000591212ENSG00000267489ENST00000590053ENST00000593082ENSG00000267684ENST00000590021CIL_00082H_0002ENSMUSG00000066543ENSMUST00000119541ENSMUSG00000093359ENSMUST00000175618ENSMUSG00000098016ENSMUST00000182882ENSMUSG00000100387ENSMUST00000187488
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00082H_0001ENSG00000221504ENST00000408577ENSG00000267012ENST00000592270ENSG00000267094ENST00000593211ENSG00000267204ENST00000591212ENSG00000267489ENST00000590053ENST00000593082ENSG00000267684ENST00000590021CIL_00082H_0002ENSMUSG00000066543ENSMUST00000119541ENSMUSG00000093359ENSMUST00000175618ENSMUSG00000098016ENSMUST00000182882ENSMUSG00000100387ENSMUST00000187488
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000221504 ENST00000408577 0.193±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A N/A N/A
ENSG00000267012 ENST00000592270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.649±0.00
ENSG00000267094 ENST00000593211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.420±0.39
ENSG00000267204 ENST00000591212 N/A 0.019±0.00 N/A 0.031±0.00 0.014±0.00 0.051±0.04 0.004±0.00 N/A N/A 0.004±0.00 N/A 0.020±0.00 N/A 0.161±0.12
ENSG00000267489 ENST00000590053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.890±0.42
ENST00000593082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.947±0.65
ENSG00000267684 ENST00000590021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.218±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000066543 ENSMUST00000119541 0.312±0.17 N/A 1.830±0.52 1.365±1.06 0.405±0.18 0.299±0.09 0.227±0.05 0.261±0.06 1.310±2.12 0.294±0.12 0.137±0.07 0.564±0.19 0.331±0.18 0.201±0.06
ENSMUSG00000093359 ENSMUST00000175618 N/A N/A N/A 13.407±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000098016 ENSMUST00000182882 0.036±0.00 N/A 0.025±0.00 N/A 0.196±0.12 0.074±0.00 0.033±0.00 0.035±0.00 0.028±0.02 0.047±0.01 N/A 0.097±0.00 0.005±0.00 0.966±0.52
ENSMUSG00000100387 ENSMUST00000187488 N/A N/A 0.043±0.02 0.230±0.08 N/A N/A N/A N/A 0.421±0.49 0.389±0.00 N/A N/A N/A 0.137±0.03

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