C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00082L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm924 VISTA 9606 6:45237622-45839555
GeneTranscriptPositionBiotype
ENSG00000124813 (RUNX2)
runt-related transcription factor 2 		ENST00000359524 (RUNX2-001) 45422485-45551079 protein_coding
ENST00000371432 (RUNX2-201) 45328317-45551082 protein_coding
ENST00000371436 (RUNX2-004) 45328727-45547393 protein_coding
ENST00000371438 (RUNX2-003) 45328369-45551079 protein_coding
ENST00000465038 (RUNX2-002) 45328323-45547305 protein_coding
ENST00000473041 (RUNX2-006) 45361573-45372055 processed_transcript
ENST00000478660 (RUNX2-009) 45422036-45663872 nonsense_mediated_decay
ENST00000483243 (RUNX2-005) 45328323-45372055 processed_transcript
ENST00000483377 (RUNX2-007) 45328157-45547209 nonsense_mediated_decay
ENST00000576263 (RUNX2-008) 45328727-45664349 protein_coding
ENSG00000196284 (SUPT3H)
suppressor of Ty 3 homolog (S. cerevisiae) 		ENST00000306867 (SUPT3H-201) 44826730-45106015 protein_coding
ENST00000371458 (SUPT3H-004) 44829767-44955510 protein_coding
ENST00000371459 (SUPT3H-006) 44828845-45377933 protein_coding
ENST00000371460 (SUPT3H-005) 44828732-45377933 protein_coding
ENST00000459689 (SUPT3H-003) 45250955-45377423 processed_transcript
ENST00000475057 (SUPT3H-001) 44809317-45377953 nonsense_mediated_decay
ENSG00000261080 (RP1-166H4.2)
 ENST00000563807 (RP1-166H4.2-001) 45573346-45576770 lincRNA
ENSG00000271857 (RP1-244F24.1)
 ENST00000606796 (RP1-244F24.1-001) 45421079-45422005 antisense
CIL_00082L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm924 VISTA 10090 17:44317720-44919644
GeneTranscriptPositionBiotype
ENSMUSG00000038954 (Supt3)
suppressor of Ty 3 		ENSMUST00000050630 (Supt3-001) 44777152-45119290 protein_coding
ENSMUST00000127798 (Supt3-002) 44777396-45119286 protein_coding
ENSMUST00000129416 (Supt3-003) 44786631-45119279 protein_coding
ENSMUST00000130623 (Supt3-004) 44777325-44925857 processed_transcript
ENSMUSG00000039153 (Runx2)
runt related transcription factor 2 		ENSMUST00000113568 (Runx2-004) 44608001-44814797 nonsense_mediated_decay
ENSMUST00000113571 (Runx2-201) 44604001-44814797 protein_coding
ENSMUST00000113572 (Runx2-002) 44604001-44736648 protein_coding
ENSMUST00000159943 (Runx2-003) 44607531-44814581 protein_coding
ENSMUST00000160199 (Runx2-014) 44639681-44734693 protein_coding
ENSMUST00000160672 (Runx2-006) 44639777-44814264 nonsense_mediated_decay
ENSMUST00000160673 (Runx2-001) 44607905-44814627 protein_coding
ENSMUST00000161489 (Runx2-005) 44813906-44814627 retained_intron
ENSMUST00000162130 (Runx2-010) 44608315-44735366 protein_coding
ENSMUST00000162373 (Runx2-012) 44607819-44735634 protein_coding
ENSMUST00000162629 (Runx2-011) 44607819-44814226 protein_coding
ENSMUST00000162816 (Runx2-008) 44495987-44736176 nonsense_mediated_decay
ENSMUST00000162878 (Runx2-009) 44606260-44735710 protein_coding
ENSMUSG00000073394 (Runx2os1)
runt related transcription factor 2, opposite strand 1 		ENSMUST00000097320 (Runx2os1-001) 44735845-44737612 antisense
ENSMUSG00000089849 (Runx2os2)
runt related transcription factor 2, opposite strand 2 		ENSMUST00000161664 (Runx2os2-001) 44710222-44713925 antisense
ENSMUSG00000090048 (Runx2os3)
runt related transcription factor 2, opposite strand 3 		ENSMUST00000160203 (Runx2os3-001) 44561990-44563172 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00082L_0001ENSG00000124813ENST00000359524ENST00000371432ENST00000371436ENST00000371438ENST00000465038ENST00000473041ENST00000478660ENST00000483243ENST00000483377ENST00000576263ENSG00000196284ENST00000306867ENST00000371458ENST00000371459ENST00000371460ENST00000459689ENST00000475057ENSG00000261080ENST00000563807ENSG00000271857ENST00000606796CIL_00082L_0002ENSMUSG00000038954ENSMUST00000050630ENSMUST00000127798ENSMUST00000129416ENSMUST00000130623ENSMUSG00000039153ENSMUST00000113568ENSMUST00000113571ENSMUST00000113572ENSMUST00000159943ENSMUST00000160199ENSMUST00000160672ENSMUST00000160673ENSMUST00000161489ENSMUST00000162130ENSMUST00000162373ENSMUST00000162629ENSMUST00000162816ENSMUST00000162878ENSMUSG00000073394ENSMUST00000097320ENSMUSG00000089849ENSMUST00000161664ENSMUSG00000090048ENSMUST00000160203
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00082L_0001ENSG00000124813ENST00000359524ENST00000371432ENST00000371436ENST00000371438ENST00000465038ENST00000478660ENST00000483243ENST00000576263ENSG00000196284ENST00000306867ENST00000371458ENST00000371459ENST00000371460ENST00000475057ENSG00000261080ENST00000563807ENSG00000271857ENST00000606796CIL_00082L_0002ENSMUSG00000038954ENSMUST00000050630ENSMUST00000127798ENSMUST00000129416ENSMUST00000130623ENSMUSG00000039153ENSMUST00000113568ENSMUST00000113571ENSMUST00000113572ENSMUST00000159943ENSMUST00000160199ENSMUST00000160673ENSMUST00000162130ENSMUST00000162373ENSMUST00000162629ENSMUST00000162816ENSMUST00000162878ENSMUSG00000073394ENSMUST00000097320ENSMUSG00000089849ENSMUST00000161664ENSMUSG00000090048ENSMUST00000160203
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124813 ENST00000359524 0.458±0.00 0.436±0.00 N/A 0.348±0.00 0.515±0.00 0.495±0.00 N/A 0.376±0.27 0.159±0.00 0.692±0.09 N/A 0.299±0.10 0.152±0.05 N/A
ENST00000371432 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.458±0.00 N/A 0.807±0.55 0.131±0.00 0.215±0.12
ENST00000371436 N/A N/A 0.222±0.00 0.486±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371438 N/A N/A N/A N/A N/A 0.304±0.00 N/A N/A N/A N/A N/A 0.244±0.00 N/A N/A
ENST00000465038 N/A N/A N/A N/A N/A N/A 0.129±0.00 N/A N/A N/A N/A N/A N/A 0.571±0.00
ENST00000473041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478660 N/A N/A N/A N/A N/A N/A N/A N/A 0.478±0.00 N/A N/A N/A N/A 0.393±0.00
ENST00000483243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.928±0.00
ENST00000483377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.197±0.00 N/A N/A N/A
ENSG00000196284 ENST00000306867 N/A N/A N/A N/A N/A 0.307±0.00 N/A N/A 0.070±0.00 N/A N/A 0.558±0.00 N/A N/A
ENST00000371458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.498±0.00 N/A N/A N/A
ENST00000371459 N/A 0.362±0.00 N/A 0.402±0.00 0.388±0.10 0.700±0.24 0.119±0.00 0.779±0.00 0.089±0.00 0.506±0.17 N/A 0.783±0.29 1.183±0.40 2.609±0.31
ENST00000371460 0.160±0.00 N/A 0.878±0.00 N/A N/A N/A 0.067±0.00 N/A 0.631±0.00 N/A N/A 0.579±0.00 0.512±0.00 N/A
ENST00000459689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475057 1.766±0.00 0.873±0.00 0.410±0.00 4.624±3.40 1.742±0.24 3.794±0.00 0.214±0.02 2.325±0.00 0.660±0.43 1.050±0.07 0.860±0.00 2.129±2.37 1.349±0.18 5.050±0.00
ENSG00000261080 ENST00000563807 0.055±0.00 0.280±0.00 N/A 0.080±0.00 0.112±0.00 0.096±0.00 0.061±0.00 0.056±0.00 0.114±0.00 0.125±0.00 0.008±0.00 0.052±0.02 0.024±0.00 N/A
ENSG00000271857 ENST00000606796 N/A 0.034±0.00 0.139±0.00 0.159±0.03 0.017±0.00 0.177±0.07 0.016±0.00 0.050±0.00 0.015±0.00 0.344±0.00 0.320±0.00 0.259±0.10 0.058±0.00 0.064±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038954 ENSMUST00000050630 4.031±0.83 3.898±1.36 2.565±0.36 3.558±0.24 1.833±0.37 0.803±0.29 1.895±0.70 2.837±0.30 2.073±0.87 1.414±0.09 3.627±1.08 2.806±0.85 1.870±0.80 11.385±1.49
ENSMUST00000127798 0.876±0.00 1.826±0.28 N/A N/A 0.670±0.01 0.371±0.00 N/A N/A 0.565±0.24 0.626±0.02 0.583±0.00 1.280±0.28 0.421±0.00 N/A
ENSMUST00000129416 N/A N/A 0.822±0.32 8.570±0.00 1.783±1.15 0.904±0.45 0.860±0.25 1.316±0.40 0.702±0.29 0.500±0.00 0.834±0.20 5.363±7.03 3.956±2.53 11.649±11.35
ENSMUST00000130623 N/A N/A N/A N/A 0.156±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039153 ENSMUST00000113568 N/A N/A N/A N/A N/A N/A N/A 0.410±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000113571 N/A 2.642±0.21 N/A 0.142±0.04 1.135±0.14 0.397±0.08 N/A 0.191±0.00 0.119±0.09 0.557±0.07 0.012±0.00 5.239±2.15 N/A 0.369±0.05
ENSMUST00000113572 0.236±0.00 N/A 0.307±0.07 0.051±0.00 0.745±0.30 0.316±0.00 0.028±0.00 N/A 0.080±0.05 0.318±0.06 0.063±0.01 N/A 0.031±0.01 N/A
ENSMUST00000159943 N/A N/A N/A 0.426±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.143±0.00
ENSMUST00000160199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.393±0.00 N/A
ENSMUST00000160672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160673 0.335±0.24 5.798±0.79 N/A N/A 1.480±0.68 0.934±0.00 N/A 0.271±0.06 N/A 1.005±0.00 N/A 7.780±2.84 N/A 2.923±1.40
ENSMUST00000161489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162130 0.578±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.550±0.00
ENSMUST00000162373 0.347±0.19 3.579±0.29 N/A N/A 1.876±1.08 0.493±0.11 N/A N/A 0.053±0.00 1.020±0.21 N/A N/A 0.374±0.03 0.331±0.00
ENSMUST00000162629 N/A 2.998±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.621±1.28 N/A N/A
ENSMUST00000162816 0.093±0.00 N/A N/A 0.310±0.23 N/A 0.179±0.01 0.039±0.00 0.109±0.00 N/A 0.343±0.00 0.047±0.00 N/A N/A 0.517±0.00
ENSMUST00000162878 N/A 3.950±0.07 N/A N/A 2.140±0.04 0.470±0.06 N/A N/A N/A N/A N/A 3.279±0.00 0.096±0.00 N/A
ENSMUSG00000073394 ENSMUST00000097320 1.074±0.53 11.508±2.41 N/A N/A 5.997±2.67 1.460±0.34 0.266±0.00 0.540±0.20 0.091±0.00 2.454±0.53 N/A 6.818±1.46 1.078±0.00 N/A
ENSMUSG00000089849 ENSMUST00000161664 0.175±0.06 0.385±0.16 0.063±0.04 0.035±0.01 0.380±0.17 0.233±0.05 0.098±0.06 0.147±0.01 0.047±0.02 0.121±0.03 0.060±0.00 0.438±0.18 0.050±0.03 N/A
ENSMUSG00000090048 ENSMUST00000160203 N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.783±2.28

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